; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10005736 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10005736
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Descriptionzinc finger protein GIS2
Genome locationChr07:5255092..5257073
RNA-Seq ExpressionHG10005736
SyntenyHG10005736
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR001878 - Zinc finger, CCHC-type
IPR036875 - Zinc finger, CCHC-type superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004148537.1 zinc finger protein GIS2 [Cucumis sativus]1.6e-14895.38Show/hide
Query:  MSSDSRSRSRSRSRSPLDRKIRSDRFSYRDAPYRRESRRGFSRDNLCKNCKRPGHFARECPNVAICHNCGLPGHIASECTTKSLCWNCREPGHMASSCPN
        MSSDSRSRSRSRSRSPLDRKIRSDRFSYRDAPYRRESRRGFSRDNLCKNCKRPGHFARECPNVAICHNCGLPGHIASECTTKSLCWNCREPGHMASSCPN
Subjt:  MSSDSRSRSRSRSRSPLDRKIRSDRFSYRDAPYRRESRRGFSRDNLCKNCKRPGHFARECPNVAICHNCGLPGHIASECTTKSLCWNCREPGHMASSCPN

Query:  EGICHTCGKAGHRARDCTAPPLPPGDLRLCNNCYKQGHIAADCTNEKACTNCRKTGHLARDCPND-LLQLCNVSGHVARQCPKSNVLGDRGDRGIGSGGG
        EGICHTCGKAGHRARDCTAPP+PPGDLRLCNNCYKQGHIAADCTNEKAC NCRKTGHLARDCPND +  LCNVSGHVARQCPKSNVLGDRGDRGI SGGG
Subjt:  EGICHTCGKAGHRARDCTAPPLPPGDLRLCNNCYKQGHIAADCTNEKACTNCRKTGHLARDCPND-LLQLCNVSGHVARQCPKSNVLGDRGDRGIGSGGG

Query:  SVRGGASGYRDVVCRNCQQLGHMSRDCMGPLMICHNCGGRGHLAYECPSGRFMERYPRRY
        S RG  SGYRDVVCRNCQQLGHMSRDCMGPLMICHNCGGRGHLAYECPSGRFM+R+PRRY
Subjt:  SVRGGASGYRDVVCRNCQQLGHMSRDCMGPLMICHNCGGRGHLAYECPSGRFMERYPRRY

XP_008448055.1 PREDICTED: zinc finger protein GIS2 [Cucumis melo]3.2e-14996.15Show/hide
Query:  MSSDSRSRSRSRSRSPLDRKIRSDRFSYRDAPYRRESRRGFSRDNLCKNCKRPGHFARECPNVAICHNCGLPGHIASECTTKSLCWNCREPGHMASSCPN
        MSSDSRSRSRSRSRSPLDRKIRSDRFSYRDAPYRRESRRGFSRDNLCKNCKRPGHFARECPNVAICHNCGLPGHIASECTTKSLCWNCREPGHMASSCPN
Subjt:  MSSDSRSRSRSRSRSPLDRKIRSDRFSYRDAPYRRESRRGFSRDNLCKNCKRPGHFARECPNVAICHNCGLPGHIASECTTKSLCWNCREPGHMASSCPN

Query:  EGICHTCGKAGHRARDCTAPPLPPGDLRLCNNCYKQGHIAADCTNEKACTNCRKTGHLARDCPND-LLQLCNVSGHVARQCPKSNVLGDRGDRGIGSGGG
        EGICHTCGKAGHRARDCTAPPLPPGDLRLCNNCYKQGHIAADCTNEKAC NCRKTGHLARDCPND +  LCNVSGHVARQCPKSNVLGDRGDRGI SGGG
Subjt:  EGICHTCGKAGHRARDCTAPPLPPGDLRLCNNCYKQGHIAADCTNEKACTNCRKTGHLARDCPND-LLQLCNVSGHVARQCPKSNVLGDRGDRGIGSGGG

Query:  SVRGGASGYRDVVCRNCQQLGHMSRDCMGPLMICHNCGGRGHLAYECPSGRFMERYPRRY
        S RG  SGYRDVVCRNCQQLGHMSRDCMGPLMICHNCGGRGHLAYECPSGRFM+RYPRRY
Subjt:  SVRGGASGYRDVVCRNCQQLGHMSRDCMGPLMICHNCGGRGHLAYECPSGRFMERYPRRY

XP_022136056.1 zinc finger protein GIS2 [Momordica charantia]5.1e-14794.64Show/hide
Query:  MSSDSRSRSRSRSRSPLDRKIRSDRFSYRDAPYRRESRRGFSRDNLCKNCKRPGHFARECPNVAICHNCGLPGHIASECTTKSLCWNCREPGHMASSCPN
        MSSDSRSRSRSRSRSPLDRKIRSDRF+YRDAPYRRESRRGFSRDNLCKNCKRPGHFARECPNVAICHNCGLPGHIASECTTKSLCWNCREPGHMA+SCPN
Subjt:  MSSDSRSRSRSRSRSPLDRKIRSDRFSYRDAPYRRESRRGFSRDNLCKNCKRPGHFARECPNVAICHNCGLPGHIASECTTKSLCWNCREPGHMASSCPN

Query:  EGICHTCGKAGHRARDCTAPPLPPGDLRLCNNCYKQGHIAADCTNEKACTNCRKTGHLARDCPND-LLQLCNVSGHVARQCPKSNVLGDRGDRGIGSGGG
        EGICHTCGKAGHRAR+CTAPPLPPGDLRLCNNCYKQGHIAADCTNEKAC NCRKTGHLARDCPND +  LCNVSGHVARQCPKSN+L DR DRGIGSGGG
Subjt:  EGICHTCGKAGHRARDCTAPPLPPGDLRLCNNCYKQGHIAADCTNEKACTNCRKTGHLARDCPND-LLQLCNVSGHVARQCPKSNVLGDRGDRGIGSGGG

Query:  SVRGGA-SGYRDVVCRNCQQLGHMSRDCMGPLMICHNCGGRGHLAYECPSGRFMERYPRRY
        SVRGG+  GYRDVVCRNCQQLGHMSRDCMGPLMICHNCGGRGHLAYECPSGRFMERYPRRY
Subjt:  SVRGGA-SGYRDVVCRNCQQLGHMSRDCMGPLMICHNCGGRGHLAYECPSGRFMERYPRRY

XP_022971383.1 zinc finger protein GIS2-like [Cucurbita maxima]1.1e-14694.23Show/hide
Query:  MSSDSRSRSRSRSRSPLDRKIRSDRFSYRDAPYRRESRRGFSRDNLCKNCKRPGHFARECPNVAICHNCGLPGHIASECTTKSLCWNCREPGHMASSCPN
        MSSDSRSRSRSRSRSP+ RKIRSDRFSYRDAPYRRESRRGFSRDNLCKNCKRPGHFARECPNVAICHNCGLPGHIASECTTKSLCWNCREPGH+ASSC N
Subjt:  MSSDSRSRSRSRSRSPLDRKIRSDRFSYRDAPYRRESRRGFSRDNLCKNCKRPGHFARECPNVAICHNCGLPGHIASECTTKSLCWNCREPGHMASSCPN

Query:  EGICHTCGKAGHRARDCTAPPLPPGDLRLCNNCYKQGHIAADCTNEKACTNCRKTGHLARDCPND-LLQLCNVSGHVARQCPKSNVLGDRGDRGIGSGGG
        EGICHTCGKAGHRAR+CTAPPLPPGDLRLCNNCYKQGHIAADCTNEKAC NCRKTGHLARDCPND +  LCNVSGHVARQCPKSNVLGDRGDRGIGSGGG
Subjt:  EGICHTCGKAGHRARDCTAPPLPPGDLRLCNNCYKQGHIAADCTNEKACTNCRKTGHLARDCPND-LLQLCNVSGHVARQCPKSNVLGDRGDRGIGSGGG

Query:  SVRGGASGYRDVVCRNCQQLGHMSRDCMGPLMICHNCGGRGHLAYECPSGRFMERYPRRY
        S+RGG  GYRDVVCR CQQLGHMSRDCM PLMICHNCGGRGHLAYECPSGRFMERYPRRY
Subjt:  SVRGGASGYRDVVCRNCQQLGHMSRDCMGPLMICHNCGGRGHLAYECPSGRFMERYPRRY

XP_038887879.1 zinc finger protein GIS2 [Benincasa hispida]1.7e-15096.54Show/hide
Query:  MSSDSRSRSRSRSRSPLDRKIRSDRFSYRDAPYRRESRRGFSRDNLCKNCKRPGHFARECPNVAICHNCGLPGHIASECTTKSLCWNCREPGHMASSCPN
        MSSDSRSRSRSRSRSPLDRKIRSDRFSYRDAPYRRESRRGFSRDNLCKNCKRPGHFARECPNVAICHNCGLPGHIASECTTKSLCWNCREPGHMASSCPN
Subjt:  MSSDSRSRSRSRSRSPLDRKIRSDRFSYRDAPYRRESRRGFSRDNLCKNCKRPGHFARECPNVAICHNCGLPGHIASECTTKSLCWNCREPGHMASSCPN

Query:  EGICHTCGKAGHRARDCTAPPLPPGDLRLCNNCYKQGHIAADCTNEKACTNCRKTGHLARDCPND-LLQLCNVSGHVARQCPKSNVLGDRGDRGIGSGGG
        EGICHTCGKAGHRARDCTAPP+PPGDLRLCNNCYKQGHIAADCTNEKAC NCRKTGHLARDCPND +  LCNVSGHVARQCPKSNVLGDRGDRGIGSGGG
Subjt:  EGICHTCGKAGHRARDCTAPPLPPGDLRLCNNCYKQGHIAADCTNEKACTNCRKTGHLARDCPND-LLQLCNVSGHVARQCPKSNVLGDRGDRGIGSGGG

Query:  SVRGGASGYRDVVCRNCQQLGHMSRDCMGPLMICHNCGGRGHLAYECPSGRFMERYPRRY
        S RGGASGYRDVVCRNCQQLGHMSRDCMGPL+ICHNCGGRGHLAYECPSGRFM+RYPRRY
Subjt:  SVRGGASGYRDVVCRNCQQLGHMSRDCMGPLMICHNCGGRGHLAYECPSGRFMERYPRRY

TrEMBL top hitse value%identityAlignment
A0A0A0K138 Uncharacterized protein7.6e-14995.38Show/hide
Query:  MSSDSRSRSRSRSRSPLDRKIRSDRFSYRDAPYRRESRRGFSRDNLCKNCKRPGHFARECPNVAICHNCGLPGHIASECTTKSLCWNCREPGHMASSCPN
        MSSDSRSRSRSRSRSPLDRKIRSDRFSYRDAPYRRESRRGFSRDNLCKNCKRPGHFARECPNVAICHNCGLPGHIASECTTKSLCWNCREPGHMASSCPN
Subjt:  MSSDSRSRSRSRSRSPLDRKIRSDRFSYRDAPYRRESRRGFSRDNLCKNCKRPGHFARECPNVAICHNCGLPGHIASECTTKSLCWNCREPGHMASSCPN

Query:  EGICHTCGKAGHRARDCTAPPLPPGDLRLCNNCYKQGHIAADCTNEKACTNCRKTGHLARDCPND-LLQLCNVSGHVARQCPKSNVLGDRGDRGIGSGGG
        EGICHTCGKAGHRARDCTAPP+PPGDLRLCNNCYKQGHIAADCTNEKAC NCRKTGHLARDCPND +  LCNVSGHVARQCPKSNVLGDRGDRGI SGGG
Subjt:  EGICHTCGKAGHRARDCTAPPLPPGDLRLCNNCYKQGHIAADCTNEKACTNCRKTGHLARDCPND-LLQLCNVSGHVARQCPKSNVLGDRGDRGIGSGGG

Query:  SVRGGASGYRDVVCRNCQQLGHMSRDCMGPLMICHNCGGRGHLAYECPSGRFMERYPRRY
        S RG  SGYRDVVCRNCQQLGHMSRDCMGPLMICHNCGGRGHLAYECPSGRFM+R+PRRY
Subjt:  SVRGGASGYRDVVCRNCQQLGHMSRDCMGPLMICHNCGGRGHLAYECPSGRFMERYPRRY

A0A1S3BIU7 zinc finger protein GIS21.5e-14996.15Show/hide
Query:  MSSDSRSRSRSRSRSPLDRKIRSDRFSYRDAPYRRESRRGFSRDNLCKNCKRPGHFARECPNVAICHNCGLPGHIASECTTKSLCWNCREPGHMASSCPN
        MSSDSRSRSRSRSRSPLDRKIRSDRFSYRDAPYRRESRRGFSRDNLCKNCKRPGHFARECPNVAICHNCGLPGHIASECTTKSLCWNCREPGHMASSCPN
Subjt:  MSSDSRSRSRSRSRSPLDRKIRSDRFSYRDAPYRRESRRGFSRDNLCKNCKRPGHFARECPNVAICHNCGLPGHIASECTTKSLCWNCREPGHMASSCPN

Query:  EGICHTCGKAGHRARDCTAPPLPPGDLRLCNNCYKQGHIAADCTNEKACTNCRKTGHLARDCPND-LLQLCNVSGHVARQCPKSNVLGDRGDRGIGSGGG
        EGICHTCGKAGHRARDCTAPPLPPGDLRLCNNCYKQGHIAADCTNEKAC NCRKTGHLARDCPND +  LCNVSGHVARQCPKSNVLGDRGDRGI SGGG
Subjt:  EGICHTCGKAGHRARDCTAPPLPPGDLRLCNNCYKQGHIAADCTNEKACTNCRKTGHLARDCPND-LLQLCNVSGHVARQCPKSNVLGDRGDRGIGSGGG

Query:  SVRGGASGYRDVVCRNCQQLGHMSRDCMGPLMICHNCGGRGHLAYECPSGRFMERYPRRY
        S RG  SGYRDVVCRNCQQLGHMSRDCMGPLMICHNCGGRGHLAYECPSGRFM+RYPRRY
Subjt:  SVRGGASGYRDVVCRNCQQLGHMSRDCMGPLMICHNCGGRGHLAYECPSGRFMERYPRRY

A0A6J1C2F8 zinc finger protein GIS22.5e-14794.64Show/hide
Query:  MSSDSRSRSRSRSRSPLDRKIRSDRFSYRDAPYRRESRRGFSRDNLCKNCKRPGHFARECPNVAICHNCGLPGHIASECTTKSLCWNCREPGHMASSCPN
        MSSDSRSRSRSRSRSPLDRKIRSDRF+YRDAPYRRESRRGFSRDNLCKNCKRPGHFARECPNVAICHNCGLPGHIASECTTKSLCWNCREPGHMA+SCPN
Subjt:  MSSDSRSRSRSRSRSPLDRKIRSDRFSYRDAPYRRESRRGFSRDNLCKNCKRPGHFARECPNVAICHNCGLPGHIASECTTKSLCWNCREPGHMASSCPN

Query:  EGICHTCGKAGHRARDCTAPPLPPGDLRLCNNCYKQGHIAADCTNEKACTNCRKTGHLARDCPND-LLQLCNVSGHVARQCPKSNVLGDRGDRGIGSGGG
        EGICHTCGKAGHRAR+CTAPPLPPGDLRLCNNCYKQGHIAADCTNEKAC NCRKTGHLARDCPND +  LCNVSGHVARQCPKSN+L DR DRGIGSGGG
Subjt:  EGICHTCGKAGHRARDCTAPPLPPGDLRLCNNCYKQGHIAADCTNEKACTNCRKTGHLARDCPND-LLQLCNVSGHVARQCPKSNVLGDRGDRGIGSGGG

Query:  SVRGGA-SGYRDVVCRNCQQLGHMSRDCMGPLMICHNCGGRGHLAYECPSGRFMERYPRRY
        SVRGG+  GYRDVVCRNCQQLGHMSRDCMGPLMICHNCGGRGHLAYECPSGRFMERYPRRY
Subjt:  SVRGGA-SGYRDVVCRNCQQLGHMSRDCMGPLMICHNCGGRGHLAYECPSGRFMERYPRRY

A0A6J1EYM8 zinc finger protein GIS2-like3.9e-14593.49Show/hide
Query:  MSSDSRSRSRSRSRSPLDRKIRSDRFSYRDAPYRRESRRGFSRDNLCKNCKRPGHFARECPNVAICHNCGLPGHIASECTTKSLCWNCREPGHMASSCPN
        MSSDSRSRSRSRSRSP+ RKIRSDRFSYRDAPYRRESRRGFSRDNLCKNCKRPGHFARECPNVAICHNCGLPGHIASECTTKSLCWNCREPGH+ASSC N
Subjt:  MSSDSRSRSRSRSRSPLDRKIRSDRFSYRDAPYRRESRRGFSRDNLCKNCKRPGHFARECPNVAICHNCGLPGHIASECTTKSLCWNCREPGHMASSCPN

Query:  EGICHTCGKAGHRARDCTAPPLPPGDLRLCNNCYKQGHIAADCTNEKACTNCRKTGHLARDCPND-LLQLCNVSGHVARQCPKSNVLGDRGDRGIGSGGG
        EGICHTCGKAGHRAR+CTAPPLPPGDLRLCNNCYKQGHIAADCTNEKAC NCRKTGHLARDCPND +  LCNVSGHVARQCPKSNVLG+RGDRGIGSGGG
Subjt:  EGICHTCGKAGHRARDCTAPPLPPGDLRLCNNCYKQGHIAADCTNEKACTNCRKTGHLARDCPND-LLQLCNVSGHVARQCPKSNVLGDRGDRGIGSGGG

Query:  SVR-GGASGYRDVVCRNCQQLGHMSRDCMGPLMICHNCGGRGHLAYECPSGRFMERYPRRY
        S+R GG  GYRDVVCR CQQLGHMSRDCM PLMICHNCGGRGHLAYECPSGRFMERYPRRY
Subjt:  SVR-GGASGYRDVVCRNCQQLGHMSRDCMGPLMICHNCGGRGHLAYECPSGRFMERYPRRY

A0A6J1I6P4 zinc finger protein GIS2-like5.5e-14794.23Show/hide
Query:  MSSDSRSRSRSRSRSPLDRKIRSDRFSYRDAPYRRESRRGFSRDNLCKNCKRPGHFARECPNVAICHNCGLPGHIASECTTKSLCWNCREPGHMASSCPN
        MSSDSRSRSRSRSRSP+ RKIRSDRFSYRDAPYRRESRRGFSRDNLCKNCKRPGHFARECPNVAICHNCGLPGHIASECTTKSLCWNCREPGH+ASSC N
Subjt:  MSSDSRSRSRSRSRSPLDRKIRSDRFSYRDAPYRRESRRGFSRDNLCKNCKRPGHFARECPNVAICHNCGLPGHIASECTTKSLCWNCREPGHMASSCPN

Query:  EGICHTCGKAGHRARDCTAPPLPPGDLRLCNNCYKQGHIAADCTNEKACTNCRKTGHLARDCPND-LLQLCNVSGHVARQCPKSNVLGDRGDRGIGSGGG
        EGICHTCGKAGHRAR+CTAPPLPPGDLRLCNNCYKQGHIAADCTNEKAC NCRKTGHLARDCPND +  LCNVSGHVARQCPKSNVLGDRGDRGIGSGGG
Subjt:  EGICHTCGKAGHRARDCTAPPLPPGDLRLCNNCYKQGHIAADCTNEKACTNCRKTGHLARDCPND-LLQLCNVSGHVARQCPKSNVLGDRGDRGIGSGGG

Query:  SVRGGASGYRDVVCRNCQQLGHMSRDCMGPLMICHNCGGRGHLAYECPSGRFMERYPRRY
        S+RGG  GYRDVVCR CQQLGHMSRDCM PLMICHNCGGRGHLAYECPSGRFMERYPRRY
Subjt:  SVRGGASGYRDVVCRNCQQLGHMSRDCMGPLMICHNCGGRGHLAYECPSGRFMERYPRRY

SwissProt top hitse value%identityAlignment
O42395 Cellular nucleic acid-binding protein4.5e-2136.09Show/hide
Query:  NLCKNCKRPGHFARECPN-----------------------VAICHNCGLPGHIASECTTK--SLCWNCREPGHMASSC-----PNEGICHTCGKAGHRA
        N C  C R GH+ARECP                          IC+ CG  GH+A +C  +    C+NC   GH+A  C       E  C+ CGK GH A
Subjt:  NLCKNCKRPGHFARECPN-----------------------VAICHNCGLPGHIASECTTK--SLCWNCREPGHMASSC-----PNEGICHTCGKAGHRA

Query:  RDCTAPPLPPGDLRLCNNCYKQGHIAADCTNEKACTNCRKTGHLARDCPNDL---LQLCNVSGHVARQC
        RDC        D + C +C + GHI  DCT  K C  C +TGH+A +C          C  SGH+AR+C
Subjt:  RDCTAPPLPPGDLRLCNNCYKQGHIAADCTNEKACTNCRKTGHLARDCPNDL---LQLCNVSGHVARQC

P36627 Cellular nucleic acid-binding protein homolog6.9e-2233.51Show/hide
Query:  CHNCGLPGHIASECTTKSLCWNCREPGHMASSC---PNEGICHTCGKAGHRARDCTAPPLPPGDLRLCNNCYKQGHIAADCTNEKACTNCRKTGHLARDC
        C+NCG  GH A ECT  S+C+NC + GH AS C     E  C+ CG AGH  RDC + P P      C  C + GHIA DC      +  R  GH +   
Subjt:  CHNCGLPGHIASECTTKSLCWNCREPGHMASSC---PNEGICHTCGKAGHRARDCTAPPLPPGDLRLCNNCYKQGHIAADCTNEKACTNCRKTGHLARDC

Query:  PNDLLQLCNVSGHVARQCPKSNVLGDRGDRGIGSGGGSVRGGASGYRDVVCRNCQQLGHMSRDCM--GPLMICHNCGGRGHLAYECPS
         N     C   GH AR C                              V C +C ++GH S +C       +C+ C   GH+A  C S
Subjt:  PNDLLQLCNVSGHVARQCPKSNVLGDRGDRGIGSGGGSVRGGASGYRDVVCRNCQQLGHMSRDCM--GPLMICHNCGGRGHLAYECPS

P53849 Zinc finger protein GIS22.8e-2335.57Show/hide
Query:  CKNCKRPGHFARECPNVAICHNCGLPGHIASECTTK-----SLCWNCREPGHMASSCPNEGICHTCGKAGHRARDCTAPPLPPGDLRL-CNNCYKQGHIA
        C  C + GH A +C +  +C+NC  PGH+ ++CT         C+NC E GH+ S C  +  C  C + GH +R+C  P       ++ C  C    H+A
Subjt:  CKNCKRPGHFARECPNVAICHNCGLPGHIASECTTK-----SLCWNCREPGHMASSCPNEGICHTCGKAGHRARDCTAPPLPPGDLRL-CNNCYKQGHIA

Query:  ADCTNEKA-----CTNCRKTGHLARDCPND-LLQLCNVSGHVARQCPKS
         DC  E       C  C + GH++RDC ND L   CN +GH+++ CPK+
Subjt:  ADCTNEKA-----CTNCRKTGHLARDCPND-LLQLCNVSGHVARQCPKS

Q04832 DNA-binding protein HEXBP1.3e-2829.56Show/hide
Query:  CKNCKRPGHFARECPNV--------AICHNCGLPGHIASECTTKS--------LCWNCREPGHMASSCPNEG--------ICHTCGKAGHRARDCT----
        C+NC + GH+ARECP            C  CG  GH++ EC  ++         C+ C E GHM+  CPN           C+ CG+ GH +RDC     
Subjt:  CKNCKRPGHFARECPNV--------AICHNCGLPGHIASECTTKS--------LCWNCREPGHMASSCPNEG--------ICHTCGKAGHRARDCT----

Query:  --------------APPLPPGDLRLCNNCYKQGHIAADCTN---------EKACTNCRKTGHLARDCPND----------LLQLCNVSGHVARQCPKSNV
                      A     GD R C  C   GHI+ DC N         ++ C  C   GH++RDCPN               C  SGH++R+CP +  
Subjt:  --------------APPLPPGDLRLCNNCYKQGHIAADCTN---------EKACTNCRKTGHLARDCPND----------LLQLCNVSGHVARQCPKSNV

Query:  LGDRGDRGIGSGGGSVRGGASGYRDVVCRNCQQLGHMSRDCM-----------GPLMICHNCGGRGHLAYECPS
                          G++G  D  C  C + GH+SR+C            G    C+ CG  GH++ +CPS
Subjt:  LGDRGDRGIGSGGGSVRGGASGYRDVVCRNCQQLGHMSRDCM-----------GPLMICHNCGGRGHLAYECPS

Q3T0Q6 Cellular nucleic acid-binding protein2.0e-2136.53Show/hide
Query:  NLCKNCKRPGHFARECPNVA----------------------ICHNCGLPGHIASEC-TTKSLCWNCREPGHMASSC-----PNEGICHTCGKAGHRARD
        N C  C R GH+ARECP                         IC+ CG  GH+A +C   +  C+NC   GH+A  C       E  C+ CGK GH ARD
Subjt:  NLCKNCKRPGHFARECPNVA----------------------ICHNCGLPGHIASEC-TTKSLCWNCREPGHMASSC-----PNEGICHTCGKAGHRARD

Query:  CTAPPLPPGDLRLCNNCYKQGHIAADCTNEKACTNCRKTGHLARDCPNDL---LQLCNVSGHVARQC
        C        D + C +C + GHI  DCT  K C  C +TGH+A +C          C  SGH+AR+C
Subjt:  CTAPPLPPGDLRLCNNCYKQGHIAADCTNEKACTNCRKTGHLARDCPNDL---LQLCNVSGHVARQC

Arabidopsis top hitse value%identityAlignment
AT1G75560.1 zinc knuckle (CCHC-type) family protein4.6e-9062.74Show/hide
Query:  SDSRSRSRSRSRSPLDRKIRSDRFSYRDAPYR--RESRRGFSRDNLCKNCKRPGHFARECPNVAICHNCGLPGHIASECTTKSLCWNCREPGHMASSCPN
        S SRSR R RSRSP DR++RS+R SY DAP R  RE RR FS+ NLC NCKRPGHFAR+C NV++C+NCGLPGHIA+ECT +S CWNCREPGH+AS+C N
Subjt:  SDSRSRSRSRSRSPLDRKIRSDRFSYRDAPYR--RESRRGFSRDNLCKNCKRPGHFARECPNVAICHNCGLPGHIASECTTKSLCWNCREPGHMASSCPN

Query:  EGICHTCGKAGHRARDCTAPPLPPGDLRLCNNCYKQGHIAADCTNEKACTNCRKTGHLARDCPND-LLQLCNVSGHVARQCPKSNV-LGDRGDRGIGSGG
        EGICH+CGK+GHRARDC+      GDLRLCNNC+KQGH+AADCTN+KAC NCR +GH+ARDC ND +  +C++SGHVAR CPK +    DRG R     G
Subjt:  EGICHTCGKAGHRARDCTAPPLPPGDLRLCNNCYKQGHIAADCTNEKACTNCRKTGHLARDCPND-LLQLCNVSGHVARQCPKSNV-LGDRGDRGIGSGG

Query:  GSVRGGASGYRDVVCRNCQQLGHMSRDCMG--PLMICHNCGGRGHLAYECPSGRFMERYPRRY
        G  RGG              L  MSRD  G   ++ICHNCGGRGH AYECPS R  +R  RRY
Subjt:  GSVRGGASGYRDVVCRNCQQLGHMSRDCMG--PLMICHNCGGRGHLAYECPSGRFMERYPRRY

AT1G75560.2 zinc knuckle (CCHC-type) family protein4.6e-9062.74Show/hide
Query:  SDSRSRSRSRSRSPLDRKIRSDRFSYRDAPYR--RESRRGFSRDNLCKNCKRPGHFARECPNVAICHNCGLPGHIASECTTKSLCWNCREPGHMASSCPN
        S SRSR R RSRSP DR++RS+R SY DAP R  RE RR FS+ NLC NCKRPGHFAR+C NV++C+NCGLPGHIA+ECT +S CWNCREPGH+AS+C N
Subjt:  SDSRSRSRSRSRSPLDRKIRSDRFSYRDAPYR--RESRRGFSRDNLCKNCKRPGHFARECPNVAICHNCGLPGHIASECTTKSLCWNCREPGHMASSCPN

Query:  EGICHTCGKAGHRARDCTAPPLPPGDLRLCNNCYKQGHIAADCTNEKACTNCRKTGHLARDCPND-LLQLCNVSGHVARQCPKSNV-LGDRGDRGIGSGG
        EGICH+CGK+GHRARDC+      GDLRLCNNC+KQGH+AADCTN+KAC NCR +GH+ARDC ND +  +C++SGHVAR CPK +    DRG R     G
Subjt:  EGICHTCGKAGHRARDCTAPPLPPGDLRLCNNCYKQGHIAADCTNEKACTNCRKTGHLARDCPND-LLQLCNVSGHVARQCPKSNV-LGDRGDRGIGSGG

Query:  GSVRGGASGYRDVVCRNCQQLGHMSRDCMG--PLMICHNCGGRGHLAYECPSGRFMERYPRRY
        G  RGG              L  MSRD  G   ++ICHNCGGRGH AYECPS R  +R  RRY
Subjt:  GSVRGGASGYRDVVCRNCQQLGHMSRDCMG--PLMICHNCGGRGHLAYECPSGRFMERYPRRY

AT2G17870.1 cold shock domain protein 34.4e-1631.96Show/hide
Query:  CHNCGLPGHIASECTTKSLCWNCREPGHMASSCPNEGICHTCGKAGHRARDCTA-----PPLPPGDLRLCNNCYKQGHIAADCTNEKACTNCRKTGHLAR
        C NCG  GH+A +C   S   +    G   S    EG C+ CG  GH ARDC            G  R C +C + GH+A DC         R  G   R
Subjt:  CHNCGLPGHIASECTTKSLCWNCREPGHMASSCPNEGICHTCGKAGHRARDCTA-----PPLPPGDLRLCNNCYKQGHIAADCTNEKACTNCRKTGHLAR

Query:  DCPNDLLQLCNVSGHVARQCPKSNVLGDRGDRGIGSGGGSVRGGASGYRDVVCRNCQQLGHMSRDCMGPL--------MICHNCGGRGHLAYEC
            D   +C   GH AR C +             +GGG+V GG S      C  C  +GH+++ C   +          C+ CGG GHLA +C
Subjt:  DCPNDLLQLCNVSGHVARQCPKSNVLGDRGDRGIGSGGGSVRGGASGYRDVVCRNCQQLGHMSRDCMGPL--------MICHNCGGRGHLAYEC

AT3G42860.1 zinc knuckle (CCHC-type) family protein4.6e-1334.25Show/hide
Query:  CKNCKRPGHFAREC------------PNVAICHNCGLPGHIASECTTKSLCWNCR-EPGHMASSCPNEGICHTCGKAGHRARDCTAPPLPPGDLRLCNNC
        C  C + GH+AR+C                 C  CG PGH + +CT +S   N + EPG M SS  + G C+ CGK GH +RDCT         +  N  
Subjt:  CKNCKRPGHFAREC------------PNVAICHNCGLPGHIASECTTKSLCWNCR-EPGHMASSCPNEGICHTCGKAGHRARDCTAPPLPPGDLRLCNNC

Query:  YKQGHIAADCTNEKACTNCRKTGHLARDCPNDLLQLCNVSGHVARQ
        ++ G  A   ++   C  C K GH +RDC +   Q  N  G   RQ
Subjt:  YKQGHIAADCTNEKACTNCRKTGHLARDCPNDLLQLCNVSGHVARQ

AT3G43590.1 zinc knuckle (CCHC-type) family protein6.0e-1326.24Show/hide
Query:  CHNCGLPGHIASECTT----KSLCWNCREPGHMASSCPNEGICHTCGKAGHRARDCTAPPLPPGDLRLCNNCYKQGHIAADCTNEKA--------CTNCR
        C++CG  GH +  C T    +  C+ C    H A  C     C+ C K GHRA+DC           +C  C   GH    C  E +        C  C+
Subjt:  CHNCGLPGHIASECTT----KSLCWNCREPGHMASSCPNEGICHTCGKAGHRARDCTAPPLPPGDLRLCNNCYKQGHIAADCTNEKA--------CTNCR

Query:  KTGHLARDCPNDLLQ------LCNVSGHVARQCPKSNVLGDRGDRGIGSGGGSVRGGASGYRDVVCRNCQQLGHMSRDCMGPLMI-----------CHNC
          GHL    P + L        C   GH    C +     +  D        + R  +  YR      C + GH +R+C     I           C+ C
Subjt:  KTGHLARDCPNDLLQ------LCNVSGHVARQCPKSNVLGDRGDRGIGSGGGSVRGGASGYRDVVCRNCQQLGHMSRDCMGPLMI-----------CHNC

Query:  GGRGHLAYECPSGRFMERYPR
         G GH A ECP+   + +  R
Subjt:  GGRGHLAYECPSGRFMERYPR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTTCAGATAGCAGGAGTCGAAGCAGGAGCAGAAGCAGGAGCCCACTGGATCGTAAGATCCGCTCTGATCGTTTTTCCTATCGTGATGCACCATACAGGAGAGAATC
ACGTCGGGGTTTCAGTCGAGACAATCTTTGCAAGAATTGCAAGCGACCTGGCCATTTTGCAAGAGAATGTCCCAATGTGGCAATTTGTCACAATTGTGGTCTCCCTGGGC
ATATTGCTTCAGAGTGCACAACAAAGTCACTATGTTGGAACTGTCGAGAACCTGGTCACATGGCAAGTAGCTGTCCCAATGAAGGCATTTGCCACACTTGTGGTAAGGCG
GGACATCGGGCCAGGGATTGCACAGCTCCTCCGCTGCCACCGGGGGACTTGAGGCTTTGCAATAATTGCTACAAGCAAGGTCATATAGCTGCTGATTGCACGAATGAGAA
GGCATGCACCAATTGCAGGAAGACTGGCCATCTTGCTCGCGATTGTCCAAATGACCTATTGCAACTGTGTAATGTATCAGGGCATGTGGCCAGACAGTGTCCAAAGTCCA
ACGTCCTTGGAGACCGGGGAGACCGAGGCATCGGCAGTGGTGGTGGAAGTGTACGTGGTGGTGCTAGTGGTTACCGGGACGTTGTGTGCAGAAACTGCCAGCAGCTTGGC
CATATGAGTAGGGATTGCATGGGCCCTTTGATGATCTGCCATAATTGTGGGGGACGTGGTCACTTGGCATACGAATGTCCTTCTGGTCGGTTTATGGAGCGTTATCCTAG
GAGGTACTAA
mRNA sequenceShow/hide mRNA sequence
ATGAGTTCAGATAGCAGGAGTCGAAGCAGGAGCAGAAGCAGGAGCCCACTGGATCGTAAGATCCGCTCTGATCGTTTTTCCTATCGTGATGCACCATACAGGAGAGAATC
ACGTCGGGGTTTCAGTCGAGACAATCTTTGCAAGAATTGCAAGCGACCTGGCCATTTTGCAAGAGAATGTCCCAATGTGGCAATTTGTCACAATTGTGGTCTCCCTGGGC
ATATTGCTTCAGAGTGCACAACAAAGTCACTATGTTGGAACTGTCGAGAACCTGGTCACATGGCAAGTAGCTGTCCCAATGAAGGCATTTGCCACACTTGTGGTAAGGCG
GGACATCGGGCCAGGGATTGCACAGCTCCTCCGCTGCCACCGGGGGACTTGAGGCTTTGCAATAATTGCTACAAGCAAGGTCATATAGCTGCTGATTGCACGAATGAGAA
GGCATGCACCAATTGCAGGAAGACTGGCCATCTTGCTCGCGATTGTCCAAATGACCTATTGCAACTGTGTAATGTATCAGGGCATGTGGCCAGACAGTGTCCAAAGTCCA
ACGTCCTTGGAGACCGGGGAGACCGAGGCATCGGCAGTGGTGGTGGAAGTGTACGTGGTGGTGCTAGTGGTTACCGGGACGTTGTGTGCAGAAACTGCCAGCAGCTTGGC
CATATGAGTAGGGATTGCATGGGCCCTTTGATGATCTGCCATAATTGTGGGGGACGTGGTCACTTGGCATACGAATGTCCTTCTGGTCGGTTTATGGAGCGTTATCCTAG
GAGGTACTAA
Protein sequenceShow/hide protein sequence
MSSDSRSRSRSRSRSPLDRKIRSDRFSYRDAPYRRESRRGFSRDNLCKNCKRPGHFARECPNVAICHNCGLPGHIASECTTKSLCWNCREPGHMASSCPNEGICHTCGKA
GHRARDCTAPPLPPGDLRLCNNCYKQGHIAADCTNEKACTNCRKTGHLARDCPNDLLQLCNVSGHVARQCPKSNVLGDRGDRGIGSGGGSVRGGASGYRDVVCRNCQQLG
HMSRDCMGPLMICHNCGGRGHLAYECPSGRFMERYPRRY