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HG10005818 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10005818
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Descriptionphospholipase A-2-activating protein
Genome locationChr07:6356616..6357329
RNA-Seq ExpressionHG10005818
SyntenyHG10005818
Gene Ontology termsGO:0010992 - ubiquitin recycling (biological process)
GO:0043161 - proteasome-mediated ubiquitin-dependent protein catabolic process (biological process)
GO:0005634 - nucleus (cellular component)
GO:0005737 - cytoplasm (cellular component)
GO:0043130 - ubiquitin binding (molecular function)
InterPro domainsIPR011989 - Armadillo-like helical
IPR013535 - PUL domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYK06700.1 phospholipase A-2-activating protein [Cucumis melo var. makuwa]3.6e-3385.11Show/hide
Query:  LVSCAVLLIEKKDLDGQGQVLSAALEIAEEENLEADSKFRALVAIGSLMLEGGDDMKKTALDFDVESIARKVKTSKDAKIAEVGADIEMLTKER
        +++ +VLLI++KDLDGQGQVLSAALEIAEEENLEADSKFRALVAIGSLM+EGGDD+K+TALDFDVESIA+K KTSKDAKIAEVGADIE+L KER
Subjt:  LVSCAVLLIEKKDLDGQGQVLSAALEIAEEENLEADSKFRALVAIGSLMLEGGDDMKKTALDFDVESIARKVKTSKDAKIAEVGADIEMLTKER

XP_008454875.1 PREDICTED: phospholipase A-2-activating protein [Cucumis melo]3.6e-3385.11Show/hide
Query:  LVSCAVLLIEKKDLDGQGQVLSAALEIAEEENLEADSKFRALVAIGSLMLEGGDDMKKTALDFDVESIARKVKTSKDAKIAEVGADIEMLTKER
        +++ +VLLI++KDLDGQGQVLSAALEIAEEENLEADSKFRALVAIGSLM+EGGDD+K+TALDFDVESIA+K KTSKDAKIAEVGADIE+L KER
Subjt:  LVSCAVLLIEKKDLDGQGQVLSAALEIAEEENLEADSKFRALVAIGSLMLEGGDDMKKTALDFDVESIARKVKTSKDAKIAEVGADIEMLTKER

XP_022136219.1 phospholipase A-2-activating protein [Momordica charantia]6.2e-3386.96Show/hide
Query:  LVSCAVLLIEKKDLDGQGQVLSAALEIAEEENLEADSKFRALVAIGSLMLEGGDDMKKTALDFDVESIARKVKTSKDAKIAEVGADIEMLTK
        +++ AVLLIEKKDLDG GQVLSAALEIAEEENLEADSKFRALVAIGS+MLEGGDD+K+TALDFDV+SIARK KTSKD+KIAEVGADIE+LTK
Subjt:  LVSCAVLLIEKKDLDGQGQVLSAALEIAEEENLEADSKFRALVAIGSLMLEGGDDMKKTALDFDVESIARKVKTSKDAKIAEVGADIEMLTK

XP_031744253.1 phospholipase A-2-activating protein isoform X1 [Cucumis sativus]3.6e-3385.11Show/hide
Query:  LVSCAVLLIEKKDLDGQGQVLSAALEIAEEENLEADSKFRALVAIGSLMLEGGDDMKKTALDFDVESIARKVKTSKDAKIAEVGADIEMLTKER
        +++ +VLLI++KDLDGQGQVLSAALEIAEEENLEADSKFRALVAIGSLM+EGGDD+K+TALDFDVESIA+K K SKDAKIAEVGADIE+LTKER
Subjt:  LVSCAVLLIEKKDLDGQGQVLSAALEIAEEENLEADSKFRALVAIGSLMLEGGDDMKKTALDFDVESIARKVKTSKDAKIAEVGADIEMLTKER

XP_038887808.1 phospholipase A-2-activating protein [Benincasa hispida]1.9e-3489.36Show/hide
Query:  LVSCAVLLIEKKDLDGQGQVLSAALEIAEEENLEADSKFRALVAIGSLMLEGGDDMKKTALDFDVESIARKVKTSKDAKIAEVGADIEMLTKER
        +++ AVLLIEKKDLDGQGQVLSAA EIAEEENLEADSKFRALVAIGSLMLEG DD+K+TALDFDVESIARK KTSKDAKIAEVGADIE+LTKER
Subjt:  LVSCAVLLIEKKDLDGQGQVLSAALEIAEEENLEADSKFRALVAIGSLMLEGGDDMKKTALDFDVESIARKVKTSKDAKIAEVGADIEMLTKER

TrEMBL top hitse value%identityAlignment
A0A0A0K2V5 Uncharacterized protein1.8e-3385.11Show/hide
Query:  LVSCAVLLIEKKDLDGQGQVLSAALEIAEEENLEADSKFRALVAIGSLMLEGGDDMKKTALDFDVESIARKVKTSKDAKIAEVGADIEMLTKER
        +++ +VLLI++KDLDGQGQVLSAALEIAEEENLEADSKFRALVAIGSLM+EGGDD+K+TALDFDVESIA+K K SKDAKIAEVGADIE+LTKER
Subjt:  LVSCAVLLIEKKDLDGQGQVLSAALEIAEEENLEADSKFRALVAIGSLMLEGGDDMKKTALDFDVESIARKVKTSKDAKIAEVGADIEMLTKER

A0A1S3C0S7 phospholipase A-2-activating protein1.8e-3385.11Show/hide
Query:  LVSCAVLLIEKKDLDGQGQVLSAALEIAEEENLEADSKFRALVAIGSLMLEGGDDMKKTALDFDVESIARKVKTSKDAKIAEVGADIEMLTKER
        +++ +VLLI++KDLDGQGQVLSAALEIAEEENLEADSKFRALVAIGSLM+EGGDD+K+TALDFDVESIA+K KTSKDAKIAEVGADIE+L KER
Subjt:  LVSCAVLLIEKKDLDGQGQVLSAALEIAEEENLEADSKFRALVAIGSLMLEGGDDMKKTALDFDVESIARKVKTSKDAKIAEVGADIEMLTKER

A0A5A7SPK0 Phospholipase A-2-activating protein1.8e-3385.11Show/hide
Query:  LVSCAVLLIEKKDLDGQGQVLSAALEIAEEENLEADSKFRALVAIGSLMLEGGDDMKKTALDFDVESIARKVKTSKDAKIAEVGADIEMLTKER
        +++ +VLLI++KDLDGQGQVLSAALEIAEEENLEADSKFRALVAIGSLM+EGGDD+K+TALDFDVESIA+K KTSKDAKIAEVGADIE+L KER
Subjt:  LVSCAVLLIEKKDLDGQGQVLSAALEIAEEENLEADSKFRALVAIGSLMLEGGDDMKKTALDFDVESIARKVKTSKDAKIAEVGADIEMLTKER

A0A5D3C5T3 Phospholipase A-2-activating protein1.8e-3385.11Show/hide
Query:  LVSCAVLLIEKKDLDGQGQVLSAALEIAEEENLEADSKFRALVAIGSLMLEGGDDMKKTALDFDVESIARKVKTSKDAKIAEVGADIEMLTKER
        +++ +VLLI++KDLDGQGQVLSAALEIAEEENLEADSKFRALVAIGSLM+EGGDD+K+TALDFDVESIA+K KTSKDAKIAEVGADIE+L KER
Subjt:  LVSCAVLLIEKKDLDGQGQVLSAALEIAEEENLEADSKFRALVAIGSLMLEGGDDMKKTALDFDVESIARKVKTSKDAKIAEVGADIEMLTKER

A0A6J1C3A1 phospholipase A-2-activating protein3.0e-3386.96Show/hide
Query:  LVSCAVLLIEKKDLDGQGQVLSAALEIAEEENLEADSKFRALVAIGSLMLEGGDDMKKTALDFDVESIARKVKTSKDAKIAEVGADIEMLTK
        +++ AVLLIEKKDLDG GQVLSAALEIAEEENLEADSKFRALVAIGS+MLEGGDD+K+TALDFDV+SIARK KTSKD+KIAEVGADIE+LTK
Subjt:  LVSCAVLLIEKKDLDGQGQVLSAALEIAEEENLEADSKFRALVAIGSLMLEGGDDMKKTALDFDVESIARKVKTSKDAKIAEVGADIEMLTK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G18860.1 transducin family protein / WD-40 repeat family protein7.8e-2667.74Show/hide
Query:  LVSCAVLLIEKKDLDGQGQVLSAALEIAEEENLEADSKFRALVAIGSLMLEGGDDMKKTALDFDVESIARKVKTSKDAKIAEVGADIEMLTKE
        L++ AVLLIEKKD +GQ QVLSAAL++AEEE  + DSKFR+LVAIGSLMLEG   +KK A+DFDVESIA+  K SK+AKIAEVGADI+++ ++
Subjt:  LVSCAVLLIEKKDLDGQGQVLSAALEIAEEENLEADSKFRALVAIGSLMLEGGDDMKKTALDFDVESIARKVKTSKDAKIAEVGADIEMLTKE

AT3G18860.2 transducin family protein / WD-40 repeat family protein3.0e-2566.67Show/hide
Query:  LVSCAVLLIEKKDLDGQGQVLSAALEIAEEENLEADSKFRALVAIGSLMLEGGDDMKKTALDFDVESIARKVKTSKDAKIAEVGADIEMLTKE
        L++ AVLLIEKKD +GQ QVLSAAL++ EEE  + DSKFR+LVAIGSLMLEG   +KK A+DFDVESIA+  K SK+AKIAEVGADI+++ ++
Subjt:  LVSCAVLLIEKKDLDGQGQVLSAALEIAEEENLEADSKFRALVAIGSLMLEGGDDMKKTALDFDVESIARKVKTSKDAKIAEVGADIEMLTKE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCATAGGGTGATTGCTTACTATGAGTGTTCCACTCTTCTTCTCTATTTGGAACTTGTCAGTTGCGCTGTATTGTTAATCGAGAAGAAGGATCTTGATGGTCAGGGTCA
AGTTCTTTCAGCTGCTCTTGAGATTGCAGAAGAGGAAAATCTGGAAGCTGATTCAAAGTTCAGGGCCTTGGTTGCCATTGGATCTCTGATGCTCGAAGGGGGTGATGATA
TGAAAAAAACGGCACTGGACTTTGATGTAGAGAGCATTGCCCGAAAAGTGAAGACTTCTAAAGATGCCAAGATTGCTGAAGTTGGAGCTGATATTGAAATGTTGACAAAA
GAAAGATGA
mRNA sequenceShow/hide mRNA sequence
ATGCATAGGGTGATTGCTTACTATGAGTGTTCCACTCTTCTTCTCTATTTGGAACTTGTCAGTTGCGCTGTATTGTTAATCGAGAAGAAGGATCTTGATGGTCAGGGTCA
AGTTCTTTCAGCTGCTCTTGAGATTGCAGAAGAGGAAAATCTGGAAGCTGATTCAAAGTTCAGGGCCTTGGTTGCCATTGGATCTCTGATGCTCGAAGGGGGTGATGATA
TGAAAAAAACGGCACTGGACTTTGATGTAGAGAGCATTGCCCGAAAAGTGAAGACTTCTAAAGATGCCAAGATTGCTGAAGTTGGAGCTGATATTGAAATGTTGACAAAA
GAAAGATGA
Protein sequenceShow/hide protein sequence
MHRVIAYYECSTLLLYLELVSCAVLLIEKKDLDGQGQVLSAALEIAEEENLEADSKFRALVAIGSLMLEGGDDMKKTALDFDVESIARKVKTSKDAKIAEVGADIEMLTK
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