; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10005844 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10005844
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionCytochrome b6-f complex subunit 7
Genome locationChr07:6930929..6931306
RNA-Seq ExpressionHG10005844
SyntenyHG10005844
Gene Ontology termsGO:0009512 - cytochrome b6f complex (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR012595 - PetM of cytochrome b6/f complex subunit 7


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6572003.1 Cytochrome b6-f complex subunit 7, partial [Cucurbita argyrosperma subsp. sororia]1.6e-5091.13Show/hide
Query:  ATASATLSPAMSTAAPIAAGSRRQRQTHVHYITGLNSFGGLKAHNNVVSLGLPVCADQSFANIVSSLKYPSKGKGKSGGGALSSSCNAAGESFRIAAIIN
        AT SATLSP +STAAPIAAGSRRQR T+VHYITGLNSF GLKAHNN+ SLGLPVCADQSFANIVSSLKYPSKGKGK+GGGALSS+CNAAGE FRIAAIIN
Subjt:  ATASATLSPAMSTAAPIAAGSRRQRQTHVHYITGLNSFGGLKAHNNVVSLGLPVCADQSFANIVSSLKYPSKGKGKSGGGALSSSCNAAGESFRIAAIIN

Query:  GLVLVGVAVGFVLLRIEASVEEAE
        GLVLVGVAVGFVLLRIEASVEEAE
Subjt:  GLVLVGVAVGFVLLRIEASVEEAE

XP_008454894.1 PREDICTED: uncharacterized protein LOC103495201 [Cucumis melo]7.8e-5394.4Show/hide
Query:  MATASATLSPAMSTAAPIAAGSRRQRQTHVHYITGLNSFGGLKAHNNVVSLGLPVCADQSFANIVSSLKYPSKGKGKSGGGALSSSCNAAGESFRIAAII
        MATASATLS AMSTAAPIAAGSRRQRQT+VHYITGLNSFGGLKAHNNVVSLGLPVCADQSFA IVSSLKYPSKGKGK+GGGALSS+CNAAGE FRIAAII
Subjt:  MATASATLSPAMSTAAPIAAGSRRQRQTHVHYITGLNSFGGLKAHNNVVSLGLPVCADQSFANIVSSLKYPSKGKGKSGGGALSSSCNAAGESFRIAAII

Query:  NGLVLVGVAVGFVLLRIEASVEEAE
        NGLVL+GVAVGFVLLRIEASVEEAE
Subjt:  NGLVLVGVAVGFVLLRIEASVEEAE

XP_022972366.1 uncharacterized protein LOC111470941 [Cucurbita maxima]3.0e-5293.55Show/hide
Query:  ATASATLSPAMSTAAPIAAGSRRQRQTHVHYITGLNSFGGLKAHNNVVSLGLPVCADQSFANIVSSLKYPSKGKGKSGGGALSSSCNAAGESFRIAAIIN
        ATASATLSPA+STAAPIAAGSRRQR T+VHYITGLNSFGGLKAHNN+ SLGLPVCADQSFANIVSSLKYPSKGKGK+GGGALSS+CNAAGE FRIAAIIN
Subjt:  ATASATLSPAMSTAAPIAAGSRRQRQTHVHYITGLNSFGGLKAHNNVVSLGLPVCADQSFANIVSSLKYPSKGKGKSGGGALSSSCNAAGESFRIAAIIN

Query:  GLVLVGVAVGFVLLRIEASVEEAE
        GLVLVGVAVGFVLLRIEASVEEAE
Subjt:  GLVLVGVAVGFVLLRIEASVEEAE

XP_023554105.1 uncharacterized protein LOC111811473 [Cucurbita pepo subsp. pepo]4.3e-5191.94Show/hide
Query:  ATASATLSPAMSTAAPIAAGSRRQRQTHVHYITGLNSFGGLKAHNNVVSLGLPVCADQSFANIVSSLKYPSKGKGKSGGGALSSSCNAAGESFRIAAIIN
        ATASATLSP +STAAPIAAGSRRQR  +VHYITGLNSFGGLKAHNN+ SLGLPVCADQSFANIVSSLKYPSKGKGK+GGGALSS+CNAAGE FRIAAIIN
Subjt:  ATASATLSPAMSTAAPIAAGSRRQRQTHVHYITGLNSFGGLKAHNNVVSLGLPVCADQSFANIVSSLKYPSKGKGKSGGGALSSSCNAAGESFRIAAIIN

Query:  GLVLVGVAVGFVLLRIEASVEEAE
        GLVLVGVAVGFVLLRIEASVEEAE
Subjt:  GLVLVGVAVGFVLLRIEASVEEAE

XP_038887487.1 uncharacterized protein LOC120077620 [Benincasa hispida]1.6e-5394.4Show/hide
Query:  MATASATLSPAMSTAAPIAAGSRRQRQTHVHYITGLNSFGGLKAHNNVVSLGLPVCADQSFANIVSSLKYPSKGKGKSGGGALSSSCNAAGESFRIAAII
        MATASATLSPAM TAAPIAAGSRRQRQT+VHYITGLNSFGGLKAHNNVVSLGLPVCADQSFANI+SSLKYPSKGKGK+GGGALSS+CNAAGE FRIAAII
Subjt:  MATASATLSPAMSTAAPIAAGSRRQRQTHVHYITGLNSFGGLKAHNNVVSLGLPVCADQSFANIVSSLKYPSKGKGKSGGGALSSSCNAAGESFRIAAII

Query:  NGLVLVGVAVGFVLLRIEASVEEAE
        NGLVL+GVAVGFVLLRIEASVEEAE
Subjt:  NGLVLVGVAVGFVLLRIEASVEEAE

TrEMBL top hitse value%identityAlignment
A0A0A0K4W4 Uncharacterized protein3.0e-5089.6Show/hide
Query:  MATASATLSPAMSTAAPIAAGSRRQRQTHVHYITGLNSFGGLKAHNNVVSLGLPVCADQSFANIVSSLKYPSKGKGKSGGGALSSSCNAAGESFRIAAII
        MATASATLS AMS+AAPI+AGSRRQRQT+ H+I+GLNSF GLKAHNNVVSLGLPVCADQSFA IVSSLKYPSKGKGK+GGGALSS+CNAAGE FRIAAII
Subjt:  MATASATLSPAMSTAAPIAAGSRRQRQTHVHYITGLNSFGGLKAHNNVVSLGLPVCADQSFANIVSSLKYPSKGKGKSGGGALSSSCNAAGESFRIAAII

Query:  NGLVLVGVAVGFVLLRIEASVEEAE
        NGLVL+GVAVGFVLLRIEASVEEAE
Subjt:  NGLVLVGVAVGFVLLRIEASVEEAE

A0A1S3C0U4 uncharacterized protein LOC1034952013.8e-5394.4Show/hide
Query:  MATASATLSPAMSTAAPIAAGSRRQRQTHVHYITGLNSFGGLKAHNNVVSLGLPVCADQSFANIVSSLKYPSKGKGKSGGGALSSSCNAAGESFRIAAII
        MATASATLS AMSTAAPIAAGSRRQRQT+VHYITGLNSFGGLKAHNNVVSLGLPVCADQSFA IVSSLKYPSKGKGK+GGGALSS+CNAAGE FRIAAII
Subjt:  MATASATLSPAMSTAAPIAAGSRRQRQTHVHYITGLNSFGGLKAHNNVVSLGLPVCADQSFANIVSSLKYPSKGKGKSGGGALSSSCNAAGESFRIAAII

Query:  NGLVLVGVAVGFVLLRIEASVEEAE
        NGLVL+GVAVGFVLLRIEASVEEAE
Subjt:  NGLVLVGVAVGFVLLRIEASVEEAE

A0A6J1C3G5 uncharacterized protein LOC1110080073.1e-4788.28Show/hide
Query:  MATASATLSPAMSTAAPIAAGSRR-QRQTHVHYITGLNSFGGLKAHNNVVSLGLPVCADQSFANIVSSLKYPSKGKGKS--GGGALSSSCNAAGESFRIA
        MATASATLSPAMSTAAPIAAGSRR QR  +VHYITGLNSFGGLKAHNNVVSLGLP+C D SFA IVSSLKYPSKGKGK+  GGGALSS+CNAAGE FRIA
Subjt:  MATASATLSPAMSTAAPIAAGSRR-QRQTHVHYITGLNSFGGLKAHNNVVSLGLPVCADQSFANIVSSLKYPSKGKGKS--GGGALSSSCNAAGESFRIA

Query:  AIINGLVLVGVAVGFVLLRIEASVEEAE
        AIINGLVLVGVAVGFVLLRIEA VEE E
Subjt:  AIINGLVLVGVAVGFVLLRIEASVEEAE

A0A6J1GND2 uncharacterized protein LOC1114555033.0e-5090.32Show/hide
Query:  ATASATLSPAMSTAAPIAAGSRRQRQTHVHYITGLNSFGGLKAHNNVVSLGLPVCADQSFANIVSSLKYPSKGKGKSGGGALSSSCNAAGESFRIAAIIN
        AT SATLSP +STAAPIAAGSRRQR T+VHYITGLNSF GLKAHNN+ SLGLPVCADQSFA+IVSSLKYPSKGKGK+GGGALSS+CNAAGE FRIAAIIN
Subjt:  ATASATLSPAMSTAAPIAAGSRRQRQTHVHYITGLNSFGGLKAHNNVVSLGLPVCADQSFANIVSSLKYPSKGKGKSGGGALSSSCNAAGESFRIAAIIN

Query:  GLVLVGVAVGFVLLRIEASVEEAE
        GLVLVGVAVGFVLLRIEASVEEAE
Subjt:  GLVLVGVAVGFVLLRIEASVEEAE

A0A6J1I5T0 uncharacterized protein LOC1114709411.4e-5293.55Show/hide
Query:  ATASATLSPAMSTAAPIAAGSRRQRQTHVHYITGLNSFGGLKAHNNVVSLGLPVCADQSFANIVSSLKYPSKGKGKSGGGALSSSCNAAGESFRIAAIIN
        ATASATLSPA+STAAPIAAGSRRQR T+VHYITGLNSFGGLKAHNN+ SLGLPVCADQSFANIVSSLKYPSKGKGK+GGGALSS+CNAAGE FRIAAIIN
Subjt:  ATASATLSPAMSTAAPIAAGSRRQRQTHVHYITGLNSFGGLKAHNNVVSLGLPVCADQSFANIVSSLKYPSKGKGKSGGGALSSSCNAAGESFRIAAIIN

Query:  GLVLVGVAVGFVLLRIEASVEEAE
        GLVLVGVAVGFVLLRIEASVEEAE
Subjt:  GLVLVGVAVGFVLLRIEASVEEAE

SwissProt top hitse value%identityAlignment
P80883 Cytochrome b6-f complex subunit 7 (Fragment)4.0e-0780.56Show/hide
Query:  NAAGESFRIAAIINGLVLVGVAVGFVLLRIEASVEE
        NAA E FRIAA++NGL LVGVA+GFVLLRIEA+VEE
Subjt:  NAAGESFRIAAIINGLVLVGVAVGFVLLRIEASVEE

Arabidopsis top hitse value%identityAlignment
AT2G26500.1 cytochrome b6f complex subunit (petM), putative1.0e-2657.36Show/hide
Query:  MATASATLSPAMSTAAPIAAGSRRQRQTH--VHYITGLNSFGGLKAHNN-VVSLGLPVCADQSFANIVSSLKYPSKGKGKSG-GGALSSSCNAAGESFRI
        MATA+A    + + +  ++   + Q+++   V YITGLNS+GGLKA NN VVS+G P+C +Q FAN+V SL      KG+ G GGALS++CNA GE F+I
Subjt:  MATASATLSPAMSTAAPIAAGSRRQRQTH--VHYITGLNSFGGLKAHNN-VVSLGLPVCADQSFANIVSSLKYPSKGKGKSG-GGALSSSCNAAGESFRI

Query:  AAIINGLVLVGVAVGFVLLRIEASVEEAE
        AAI+N L LVGVAVGFVLLRIE SVEEAE
Subjt:  AAIINGLVLVGVAVGFVLLRIEASVEEAE

AT2G26500.2 cytochrome b6f complex subunit (petM), putative1.0e-2657.36Show/hide
Query:  MATASATLSPAMSTAAPIAAGSRRQRQTH--VHYITGLNSFGGLKAHNN-VVSLGLPVCADQSFANIVSSLKYPSKGKGKSG-GGALSSSCNAAGESFRI
        MATA+A    + + +  ++   + Q+++   V YITGLNS+GGLKA NN VVS+G P+C +Q FAN+V SL      KG+ G GGALS++CNA GE F+I
Subjt:  MATASATLSPAMSTAAPIAAGSRRQRQTH--VHYITGLNSFGGLKAHNN-VVSLGLPVCADQSFANIVSSLKYPSKGKGKSG-GGALSSSCNAAGESFRI

Query:  AAIINGLVLVGVAVGFVLLRIEASVEEAE
        AAI+N L LVGVAVGFVLLRIE SVEEAE
Subjt:  AAIINGLVLVGVAVGFVLLRIEASVEEAE

AT2G26500.3 cytochrome b6f complex subunit (petM), putative1.2e-1139.84Show/hide
Query:  MATASATLSPAMSTAAPIAAGSRRQRQTH--VHYITGLNSFGGLKAHNN-VVSLGLPVCADQSFANIVSSLKYPSKGKGKSGGGALSSSCNAAGESFRIA
        MATA+A    + + +  ++   + Q+++   V YITGLNS+GGLKA NN VVS+G P+C +Q FAN+V SLK                            
Subjt:  MATASATLSPAMSTAAPIAAGSRRQRQTH--VHYITGLNSFGGLKAHNN-VVSLGLPVCADQSFANIVSSLKYPSKGKGKSGGGALSSSCNAAGESFRIA

Query:  AIINGLVLVGVAVGFVLLRIEASVEEAE
                 G  VGFVLLRIE SVEEAE
Subjt:  AIINGLVLVGVAVGFVLLRIEASVEEAE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTACAGCCTCCGCTACCCTTTCGCCGGCCATGTCCACCGCCGCCCCCATCGCCGCCGGCTCAAGGCGGCAGAGGCAAACCCATGTCCATTACATAACTGGGCTTAA
CTCATTTGGTGGCTTGAAAGCTCACAACAATGTCGTCTCCTTGGGCCTTCCCGTTTGTGCTGATCAATCATTTGCAAACATTGTGAGCTCTTTGAAATACCCATCAAAGG
GAAAAGGCAAAAGCGGCGGTGGGGCTCTTTCTTCCAGTTGTAATGCCGCCGGTGAGAGTTTCAGGATTGCTGCCATTATCAATGGGCTTGTTCTTGTTGGAGTGGCTGTG
GGGTTTGTTCTTCTTCGGATTGAAGCATCTGTTGAGGAGGCAGAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCTACAGCCTCCGCTACCCTTTCGCCGGCCATGTCCACCGCCGCCCCCATCGCCGCCGGCTCAAGGCGGCAGAGGCAAACCCATGTCCATTACATAACTGGGCTTAA
CTCATTTGGTGGCTTGAAAGCTCACAACAATGTCGTCTCCTTGGGCCTTCCCGTTTGTGCTGATCAATCATTTGCAAACATTGTGAGCTCTTTGAAATACCCATCAAAGG
GAAAAGGCAAAAGCGGCGGTGGGGCTCTTTCTTCCAGTTGTAATGCCGCCGGTGAGAGTTTCAGGATTGCTGCCATTATCAATGGGCTTGTTCTTGTTGGAGTGGCTGTG
GGGTTTGTTCTTCTTCGGATTGAAGCATCTGTTGAGGAGGCAGAGTGA
Protein sequenceShow/hide protein sequence
MATASATLSPAMSTAAPIAAGSRRQRQTHVHYITGLNSFGGLKAHNNVVSLGLPVCADQSFANIVSSLKYPSKGKGKSGGGALSSSCNAAGESFRIAAIINGLVLVGVAV
GFVLLRIEASVEEAE