; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10005853 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10005853
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionESCRT-related protein CHMP1B-like
Genome locationChr07:7053023..7053401
RNA-Seq ExpressionHG10005853
SyntenyHG10005853
Gene Ontology termsGO:0015031 - protein transport (biological process)
GO:0032509 - endosome transport via multivesicular body sorting pathway (biological process)
GO:0045324 - late endosome to vacuole transport (biological process)
GO:0000815 - ESCRT III complex (cellular component)
GO:0005771 - multivesicular body (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004146833.1 ESCRT-related protein CHMP1B [Cucumis sativus]1.1e-0683.78Show/hide
Query:  KSEKLKIKKAMEKGNMDGAQIYTKNAIQKHTEHMNYL
        KSEKLKIKKAMEKGNMDGA+IY +NAI+K TE MNYL
Subjt:  KSEKLKIKKAMEKGNMDGAQIYTKNAIQKHTEHMNYL

XP_009396527.1 PREDICTED: ESCRT-related protein CHMP1-like [Musa acuminata subsp. malaccensis]4.9e-0781.08Show/hide
Query:  KSEKLKIKKAMEKGNMDGAQIYTKNAIQKHTEHMNYL
        KSEKLK+KKA+EKGNMDGA+IY +NAI+K TEHMNYL
Subjt:  KSEKLKIKKAMEKGNMDGAQIYTKNAIQKHTEHMNYL

XP_020103063.1 ESCRT-related protein CHMP1-like [Ananas comosus]1.1e-0678.38Show/hide
Query:  KSEKLKIKKAMEKGNMDGAQIYTKNAIQKHTEHMNYL
        K+EKLK+KKAMEKGN+DGA+IY +NAI+K TEHMNYL
Subjt:  KSEKLKIKKAMEKGNMDGAQIYTKNAIQKHTEHMNYL

XP_022148096.1 ESCRT-related protein CHMP1B-like isoform X1 [Momordica charantia]1.1e-0683.78Show/hide
Query:  KSEKLKIKKAMEKGNMDGAQIYTKNAIQKHTEHMNYL
        KSEKLKIKKAMEKGNMDGA+IY +NAI+K TE MNYL
Subjt:  KSEKLKIKKAMEKGNMDGAQIYTKNAIQKHTEHMNYL

XP_022949550.1 ESCRT-related protein CHMP1B-like [Cucurbita moschata]1.1e-0683.78Show/hide
Query:  KSEKLKIKKAMEKGNMDGAQIYTKNAIQKHTEHMNYL
        KSEKLKIKKAMEKGNMDGA+IY +NAI+K TE MNYL
Subjt:  KSEKLKIKKAMEKGNMDGAQIYTKNAIQKHTEHMNYL

TrEMBL top hitse value%identityAlignment
A0A0A0LIG8 Uncharacterized protein5.3e-0783.78Show/hide
Query:  KSEKLKIKKAMEKGNMDGAQIYTKNAIQKHTEHMNYL
        KSEKLKIKKAMEKGNMDGA+IY +NAI+K TE MNYL
Subjt:  KSEKLKIKKAMEKGNMDGAQIYTKNAIQKHTEHMNYL

A0A199VNC4 ESCRT-related protein CHMP1-like5.3e-0778.38Show/hide
Query:  KSEKLKIKKAMEKGNMDGAQIYTKNAIQKHTEHMNYL
        K+EKLK+KKAMEKGN+DGA+IY +NAI+K TEHMNYL
Subjt:  KSEKLKIKKAMEKGNMDGAQIYTKNAIQKHTEHMNYL

A0A5A7V1A1 ESCRT-related protein CHMP1B5.3e-0783.78Show/hide
Query:  KSEKLKIKKAMEKGNMDGAQIYTKNAIQKHTEHMNYL
        KSEKLKIKKAMEKGNMDGA+IY +NAI+K TE MNYL
Subjt:  KSEKLKIKKAMEKGNMDGAQIYTKNAIQKHTEHMNYL

A0A6J1KC50 ESCRT-related protein CHMP1B-like5.3e-0783.78Show/hide
Query:  KSEKLKIKKAMEKGNMDGAQIYTKNAIQKHTEHMNYL
        KSEKLKIKKAMEKGNMDGA+IY +NAI+K TE MNYL
Subjt:  KSEKLKIKKAMEKGNMDGAQIYTKNAIQKHTEHMNYL

M0RYJ5 Uncharacterized protein2.4e-0781.08Show/hide
Query:  KSEKLKIKKAMEKGNMDGAQIYTKNAIQKHTEHMNYL
        KSEKLK+KKA+EKGNMDGA+IY +NAI+K TEHMNYL
Subjt:  KSEKLKIKKAMEKGNMDGAQIYTKNAIQKHTEHMNYL

SwissProt top hitse value%identityAlignment
O96552 Charged multivesicular body protein 11.7e-0551.16Show/hide
Query:  KKVRGGKSEKLKIKKAMEKGNMDGAQIYTKNAIQKHTEHMNYL
        K  +  K++K+K+KKA+E+GNMDGA+IY +NAI++  + +NYL
Subjt:  KKVRGGKSEKLKIKKAMEKGNMDGAQIYTKNAIQKHTEHMNYL

Q84VG1 ESCRT-related protein CHMP14.2e-0975.68Show/hide
Query:  KSEKLKIKKAMEKGNMDGAQIYTKNAIQKHTEHMNYL
        K +KLK+KKA+EKGNMDGA+IY +NAI+K TEHMNYL
Subjt:  KSEKLKIKKAMEKGNMDGAQIYTKNAIQKHTEHMNYL

Q8LE58 ESCRT-related protein CHMP1A3.6e-0872.97Show/hide
Query:  KSEKLKIKKAMEKGNMDGAQIYTKNAIQKHTEHMNYL
        +SEKLK+KKA+EKGNMDGA+IY +NAI+K +E MNYL
Subjt:  KSEKLKIKKAMEKGNMDGAQIYTKNAIQKHTEHMNYL

Q9SSM4 ESCRT-related protein CHMP1B3.6e-0872.97Show/hide
Query:  KSEKLKIKKAMEKGNMDGAQIYTKNAIQKHTEHMNYL
        K+EKLK+KKA+EKGNMDGA+IY +NAI+K +E MNYL
Subjt:  KSEKLKIKKAMEKGNMDGAQIYTKNAIQKHTEHMNYL

Arabidopsis top hitse value%identityAlignment
AT1G17730.1 vacuolar protein sorting 46.12.5e-0972.97Show/hide
Query:  KSEKLKIKKAMEKGNMDGAQIYTKNAIQKHTEHMNYL
        +SEKLK+KKA+EKGNMDGA+IY +NAI+K +E MNYL
Subjt:  KSEKLKIKKAMEKGNMDGAQIYTKNAIQKHTEHMNYL

AT1G73030.1 SNF7 family protein2.5e-0972.97Show/hide
Query:  KSEKLKIKKAMEKGNMDGAQIYTKNAIQKHTEHMNYL
        K+EKLK+KKA+EKGNMDGA+IY +NAI+K +E MNYL
Subjt:  KSEKLKIKKAMEKGNMDGAQIYTKNAIQKHTEHMNYL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGCGTCGTGCAGTCTTCAAATACGTGCAGATCCATCGGTCATCCGCTGTTCTTCAAGCCCGATCTTAGCTCAGATCTGTTCAAGATCAAGAAAGTGCGAGGAGGAAA
ATCTGAGAAGCTCAAGATCAAGAAAGCCATGGAGAAGGGAAACATGGATGGAGCACAAATTTATACTAAGAATGCAATTCAGAAGCATACGGAGCATATGAACTACCTCT
GA
mRNA sequenceShow/hide mRNA sequence
ATGAGCGTCGTGCAGTCTTCAAATACGTGCAGATCCATCGGTCATCCGCTGTTCTTCAAGCCCGATCTTAGCTCAGATCTGTTCAAGATCAAGAAAGTGCGAGGAGGAAA
ATCTGAGAAGCTCAAGATCAAGAAAGCCATGGAGAAGGGAAACATGGATGGAGCACAAATTTATACTAAGAATGCAATTCAGAAGCATACGGAGCATATGAACTACCTCT
GA
Protein sequenceShow/hide protein sequence
MSVVQSSNTCRSIGHPLFFKPDLSSDLFKIKKVRGGKSEKLKIKKAMEKGNMDGAQIYTKNAIQKHTEHMNYL