; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10005868 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10005868
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Descriptiontype IV secretion system protein virB10-like
Genome locationChr07:7409649..7410053
RNA-Seq ExpressionHG10005868
SyntenyHG10005868
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8645870.1 hypothetical protein Csa_017149 [Cucumis sativus]1.3e-5890.15Show/hide
Query:  MSTPLDQLQPPPPLHSAHASVGPLIAVLAVISILGVIAGMIGRLCSGRPVLGYGAHYDVEDWVEKKCASCLDGSLDPPPPPPHLRRPPPLDSVPVAEPLG
        MSTP+DQLQPPPPLHS+HASVGPLIAVLAVISILGVIAGMIGRLCSGRPV GYGAHYD+EDWVEKKCASCLDGSLDPPPPPPHLR PPPLDSVPVAEPLG
Subjt:  MSTPLDQLQPPPPLHSAHASVGPLIAVLAVISILGVIAGMIGRLCSGRPVLGYGAHYDVEDWVEKKCASCLDGSLDPPPPPPHLRRPPPLDSVPVAEPLG

Query:  GPPPEIKQGADPDVDADAKREDLQSAPPGTGG
        GPPPEIKQ A    DADAK E+LQSA PGTGG
Subjt:  GPPPEIKQGADPDVDADAKREDLQSAPPGTGG

KAG7011671.1 hypothetical protein SDJN02_26577, partial [Cucurbita argyrosperma subsp. argyrosperma]2.1e-5181.75Show/hide
Query:  MSTPLDQLQPPPPLHSAHASVGPLIAVLAVISILGVIAGMIGRLCSGRPVLGYGAHYDVEDWVEKKCASCLDGSLD---PPPPPPHLRRPPPLDSVPVAE
        MSTP+DQLQPPP  HS H SVGP+IAVLAVISILGVIAG+IGRLCSGRPV GYGAHYDVE+WVEKKCASCLDGSLD   PPPPPPHLR PPPLD+VPV E
Subjt:  MSTPLDQLQPPPPLHSAHASVGPLIAVLAVISILGVIAGMIGRLCSGRPVLGYGAHYDVEDWVEKKCASCLDGSLD---PPPPPPHLRRPPPLDSVPVAE

Query:  PLGGPPPEIKQGADPDVDADAKREDLQSAPPGTGGES
        PLGG PPEIKQGAD       KRE+LQSA PGTGGES
Subjt:  PLGGPPPEIKQGADPDVDADAKREDLQSAPPGTGGES

XP_008455516.1 PREDICTED: type IV secretion system protein virB10-like [Cucumis melo]7.8e-5989.13Show/hide
Query:  MSTPLDQLQPPPPLHSAHASVGPLIAVLAVISILGVIAGMIGRLCSGRPVLGYGAHYDVEDWVEKKCASCLDGSLD----PPPPPPHLRRPPPLDSVPVA
        MSTP+DQLQPPPPLHS+HASVGPLIAVLAVISILGVIAGMIGRLCSGRPV GYGAHYDVEDWVEKKCASCLDGSLD    PPPPPPHLR PPPLDSVPVA
Subjt:  MSTPLDQLQPPPPLHSAHASVGPLIAVLAVISILGVIAGMIGRLCSGRPVLGYGAHYDVEDWVEKKCASCLDGSLD----PPPPPPHLRRPPPLDSVPVA

Query:  EPLGGPPPEIKQGADPDVDADAKREDLQSAPPGTGGES
        EPLGGPPPEIKQGA    DADAK E+LQSA PGTGGES
Subjt:  EPLGGPPPEIKQGADPDVDADAKREDLQSAPPGTGGES

XP_022972364.1 uncharacterized protein LOC111470940 [Cucurbita maxima]3.5e-5182.58Show/hide
Query:  MSTPLDQLQPPPPLHSAHASVGPLIAVLAVISILGVIAGMIGRLCSGRPVLGYGAHYDVEDWVEKKCASCLDGSLDPPPPPPHLRRPPPLDSVPVAEPLG
        MSTP DQLQPPP  HS H SVGP+IAVLAVISILGVIAG+IGRLCSGRPV GYGAHYDVE+WVEKKCASCLDGSLDPPPPP HLR PPPLD+VPV EPLG
Subjt:  MSTPLDQLQPPPPLHSAHASVGPLIAVLAVISILGVIAGMIGRLCSGRPVLGYGAHYDVEDWVEKKCASCLDGSLDPPPPPPHLRRPPPLDSVPVAEPLG

Query:  GPPPEIKQGADPDVDADAKREDLQSAPPGTGG
        G PPEIKQG      AD KRE+LQSA PGTGG
Subjt:  GPPPEIKQGADPDVDADAKREDLQSAPPGTGG

XP_038887147.1 uncharacterized protein LOC120077337 [Benincasa hispida]1.4e-6091.97Show/hide
Query:  MSTPLDQLQPPPPLHSAHASVGPLIAVLAVISILGVIAGMIGRLCSGRPVLGYGAHYDVEDWVEKKCASCLDGSLD-PPPPPPHLRRPPPLDSVPVAEPL
        MSTPLDQLQPPP LHSAHASVGPLIAVLAVISILGVIAGMIGRLCSGRPV GYGAHYDVEDW+EKKCASCLDGSLD PPPPPPHLRRPP LDSVPVAEPL
Subjt:  MSTPLDQLQPPPPLHSAHASVGPLIAVLAVISILGVIAGMIGRLCSGRPVLGYGAHYDVEDWVEKKCASCLDGSLD-PPPPPPHLRRPPPLDSVPVAEPL

Query:  GGPPPEIKQGADPD--VDADAKREDLQSAPPGTGGES
        GGPPPEIKQGAD D  VD D KRE+LQSAPPGTGGES
Subjt:  GGPPPEIKQGADPD--VDADAKREDLQSAPPGTGGES

TrEMBL top hitse value%identityAlignment
A0A0A0K6N4 Uncharacterized protein7.6e-6090.3Show/hide
Query:  MSTPLDQLQPPPPLHSAHASVGPLIAVLAVISILGVIAGMIGRLCSGRPVLGYGAHYDVEDWVEKKCASCLDGSLDPPPPPPHLRRPPPLDSVPVAEPLG
        MSTP+DQLQPPPPLHS+HASVGPLIAVLAVISILGVIAGMIGRLCSGRPV GYGAHYD+EDWVEKKCASCLDGSLDPPPPPPHLR PPPLDSVPVAEPLG
Subjt:  MSTPLDQLQPPPPLHSAHASVGPLIAVLAVISILGVIAGMIGRLCSGRPVLGYGAHYDVEDWVEKKCASCLDGSLDPPPPPPHLRRPPPLDSVPVAEPLG

Query:  GPPPEIKQGADPDVDADAKREDLQSAPPGTGGES
        GPPPEIKQ A    DADAK E+LQSA PGTGGES
Subjt:  GPPPEIKQGADPDVDADAKREDLQSAPPGTGGES

A0A1S3C1T9 type IV secretion system protein virB10-like3.8e-5989.13Show/hide
Query:  MSTPLDQLQPPPPLHSAHASVGPLIAVLAVISILGVIAGMIGRLCSGRPVLGYGAHYDVEDWVEKKCASCLDGSLD----PPPPPPHLRRPPPLDSVPVA
        MSTP+DQLQPPPPLHS+HASVGPLIAVLAVISILGVIAGMIGRLCSGRPV GYGAHYDVEDWVEKKCASCLDGSLD    PPPPPPHLR PPPLDSVPVA
Subjt:  MSTPLDQLQPPPPLHSAHASVGPLIAVLAVISILGVIAGMIGRLCSGRPVLGYGAHYDVEDWVEKKCASCLDGSLD----PPPPPPHLRRPPPLDSVPVA

Query:  EPLGGPPPEIKQGADPDVDADAKREDLQSAPPGTGGES
        EPLGGPPPEIKQGA    DADAK E+LQSA PGTGGES
Subjt:  EPLGGPPPEIKQGADPDVDADAKREDLQSAPPGTGGES

A0A5A7SPN0 Type IV secretion system protein virB10-like3.8e-5989.13Show/hide
Query:  MSTPLDQLQPPPPLHSAHASVGPLIAVLAVISILGVIAGMIGRLCSGRPVLGYGAHYDVEDWVEKKCASCLDGSLD----PPPPPPHLRRPPPLDSVPVA
        MSTP+DQLQPPPPLHS+HASVGPLIAVLAVISILGVIAGMIGRLCSGRPV GYGAHYDVEDWVEKKCASCLDGSLD    PPPPPPHLR PPPLDSVPVA
Subjt:  MSTPLDQLQPPPPLHSAHASVGPLIAVLAVISILGVIAGMIGRLCSGRPVLGYGAHYDVEDWVEKKCASCLDGSLD----PPPPPPHLRRPPPLDSVPVA

Query:  EPLGGPPPEIKQGADPDVDADAKREDLQSAPPGTGGES
        EPLGGPPPEIKQGA    DADAK E+LQSA PGTGGES
Subjt:  EPLGGPPPEIKQGADPDVDADAKREDLQSAPPGTGGES

A0A6J1GL66 uncharacterized protein LOC1114553832.5e-5081.95Show/hide
Query:  MSTPLDQLQPPPPLHSAHASVGPLIAVLAVISILGVIAGMIGRLCSGRPVLGYGAHYDVEDWVEKKCASCLDGSLD-PPPPPPHLRRPPPLDSVPVAEPL
        MSTP+DQLQPPP  HS + SVGP+IAVLAVISILGVIAG+IGRLCSGRPV GYGAHYDVE+WVEKKCASCLDGSLD PPPPPPHLR PPPLD+VPV EPL
Subjt:  MSTPLDQLQPPPPLHSAHASVGPLIAVLAVISILGVIAGMIGRLCSGRPVLGYGAHYDVEDWVEKKCASCLDGSLD-PPPPPPHLRRPPPLDSVPVAEPL

Query:  GGPPPEIKQGADPDVDADAKREDLQSAPPGTGG
        GG PPEIKQGAD       KRE+LQSA PGTGG
Subjt:  GGPPPEIKQGADPDVDADAKREDLQSAPPGTGG

A0A6J1IBA8 uncharacterized protein LOC1114709401.7e-5182.58Show/hide
Query:  MSTPLDQLQPPPPLHSAHASVGPLIAVLAVISILGVIAGMIGRLCSGRPVLGYGAHYDVEDWVEKKCASCLDGSLDPPPPPPHLRRPPPLDSVPVAEPLG
        MSTP DQLQPPP  HS H SVGP+IAVLAVISILGVIAG+IGRLCSGRPV GYGAHYDVE+WVEKKCASCLDGSLDPPPPP HLR PPPLD+VPV EPLG
Subjt:  MSTPLDQLQPPPPLHSAHASVGPLIAVLAVISILGVIAGMIGRLCSGRPVLGYGAHYDVEDWVEKKCASCLDGSLDPPPPPPHLRRPPPLDSVPVAEPLG

Query:  GPPPEIKQGADPDVDADAKREDLQSAPPGTGG
        G PPEIKQG      AD KRE+LQSA PGTGG
Subjt:  GPPPEIKQGADPDVDADAKREDLQSAPPGTGG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G26520.1 unknown protein1.4e-1337.88Show/hide
Query:  QPPPPLH----------SAHASVGPLIAVLAVISILGVIAGMIGRLCSGRPVLGYGAHYDVEDWVEKKCASCLDGSLDPPPPPPHLRRPPPLDSVPVAEP
        QPPP             + ++++GP IAV  V+++L V+A +IGRLCSG+ +LGYG  YD+E W E +C SC+DG + P  P P    P P    P+   
Subjt:  QPPPPLH----------SAHASVGPLIAVLAVISILGVIAGMIGRLCSGRPVLGYGAHYDVEDWVEKKCASCLDGSLDPPPPPPHLRRPPPLDSVPVAEP

Query:  LGGPPPEIK-QGADPDVDADAKRED-LQSAPP
          G   E +   AD D + D +++D L   PP
Subjt:  LGGPPPEIK-QGADPDVDADAKRED-LQSAPP

AT3G57500.1 unknown protein9.0e-1345.26Show/hide
Query:  QPPPPLHSAHASVGPLIAVLAVISILGVIAGMIGRLCSGRPVLGYGAHYDVEDWVEKKCASCLDG-----SLDPPPPPPHLRRPPPLDSVPVAEP
        Q  P  +S H S+  L+ VLAVI+IL V+AG+  RLC GR  L +G  +D+E WVE+KC SC+D      S  P PPPP    PPP  +   ++P
Subjt:  QPPPPLHSAHASVGPLIAVLAVISILGVIAGMIGRLCSGRPVLGYGAHYDVEDWVEKKCASCLDG-----SLDPPPPPPHLRRPPPLDSVPVAEP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCCACTCCTCTCGACCAGCTCCAGCCCCCGCCGCCCCTCCACTCCGCCCACGCCTCCGTCGGCCCACTCATCGCCGTCCTCGCCGTCATTTCCATCCTCGGCGTCAT
TGCCGGTATGATTGGCCGCCTCTGCTCCGGCCGCCCCGTCTTGGGCTACGGCGCTCACTACGACGTCGAGGATTGGGTCGAGAAGAAATGTGCTTCCTGCCTCGACGGCT
CCCTCGACCCTCCTCCTCCGCCGCCGCATCTCCGCCGCCCGCCGCCGCTCGATTCTGTTCCTGTGGCCGAACCGCTTGGTGGCCCACCACCGGAGATCAAGCAAGGTGCC
GATCCCGATGTGGATGCCGATGCTAAACGTGAGGATTTGCAGTCGGCGCCTCCTGGAACCGGCGGTGAGTCGTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCCACTCCTCTCGACCAGCTCCAGCCCCCGCCGCCCCTCCACTCCGCCCACGCCTCCGTCGGCCCACTCATCGCCGTCCTCGCCGTCATTTCCATCCTCGGCGTCAT
TGCCGGTATGATTGGCCGCCTCTGCTCCGGCCGCCCCGTCTTGGGCTACGGCGCTCACTACGACGTCGAGGATTGGGTCGAGAAGAAATGTGCTTCCTGCCTCGACGGCT
CCCTCGACCCTCCTCCTCCGCCGCCGCATCTCCGCCGCCCGCCGCCGCTCGATTCTGTTCCTGTGGCCGAACCGCTTGGTGGCCCACCACCGGAGATCAAGCAAGGTGCC
GATCCCGATGTGGATGCCGATGCTAAACGTGAGGATTTGCAGTCGGCGCCTCCTGGAACCGGCGGTGAGTCGTGA
Protein sequenceShow/hide protein sequence
MSTPLDQLQPPPPLHSAHASVGPLIAVLAVISILGVIAGMIGRLCSGRPVLGYGAHYDVEDWVEKKCASCLDGSLDPPPPPPHLRRPPPLDSVPVAEPLGGPPPEIKQGA
DPDVDADAKREDLQSAPPGTGGES