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HG10005906 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10005906
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionJHL25P11.1 protein
Genome locationChr07:8052816..8053220
RNA-Seq ExpressionHG10005906
SyntenyHG10005906
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6602743.1 hypothetical protein SDJN03_07976, partial [Cucurbita argyrosperma subsp. sororia]8.7e-5076.52Show/hide
Query:  AAASSWLHSSRSRFVFLLLCSPLLVPIFCATFPFIFAIDLCIRLARHRRRICLRDSPEIERLQECEEGGCRPPLSEEIGGDSAEEIGLLQRYLDDQLLLV
        AAAS WL SSRSRF  LLLCSPLLVPIFCATFP I AI+LCIRLARHR RICLRDSPE ERL+ CEEGGCR  L E++G D  E+IGLLQRYLDDQLLLV
Subjt:  AAASSWLHSSRSRFVFLLLCSPLLVPIFCATFPFIFAIDLCIRLARHRRRICLRDSPEIERLQECEEGGCRPPLSEEIGGDSAEEIGLLQRYLDDQLLLV

Query:  RSVYECADSGDHVNGDALFCNIKNTNLIPLLG
        RSVYEC D  D ++GDA FC+++N+NLIPLLG
Subjt:  RSVYECADSGDHVNGDALFCNIKNTNLIPLLG

XP_022152501.1 uncharacterized protein LOC111020213 [Momordica charantia]3.6e-4877.27Show/hide
Query:  AAASSWLHSSRSRFVFLLLCSPLLVPIFCATFPFIFAIDLCIRLARHRRRICLRDSPEIERLQECEEGGCRPPLSEEIGGDSAEEIGLLQRYLDDQLLLV
        AAASSWL SSR+RFVF+LLCSPLLVPIFCATFPFI AI+LCIRLARHRR I LRDSPEIERL+ CEEGGC   L E    D  EEIGLLQRYLDDQLLLV
Subjt:  AAASSWLHSSRSRFVFLLLCSPLLVPIFCATFPFIFAIDLCIRLARHRRRICLRDSPEIERLQECEEGGCRPPLSEEIGGDSAEEIGLLQRYLDDQLLLV

Query:  RSVYECADSGDHVNGDALFCNIKNTNLIPLLG
        RSVYEC D  + +NGDA FC+ KN+N+IPLLG
Subjt:  RSVYECADSGDHVNGDALFCNIKNTNLIPLLG

XP_022962190.1 uncharacterized protein LOC111462719 [Cucurbita moschata]5.1e-5077.27Show/hide
Query:  AAASSWLHSSRSRFVFLLLCSPLLVPIFCATFPFIFAIDLCIRLARHRRRICLRDSPEIERLQECEEGGCRPPLSEEIGGDSAEEIGLLQRYLDDQLLLV
        AAAS WL SSRSRF  LLLCSPLLVPIFCATFP I AI+LCIRLARHR RICLRDSPE ERL+ CEEGGCR  L E++G D  E+IGLLQRYLDDQLLLV
Subjt:  AAASSWLHSSRSRFVFLLLCSPLLVPIFCATFPFIFAIDLCIRLARHRRRICLRDSPEIERLQECEEGGCRPPLSEEIGGDSAEEIGLLQRYLDDQLLLV

Query:  RSVYECADSGDHVNGDALFCNIKNTNLIPLLG
        RSVYEC D  D ++GDA FC+I+N+NLIPLLG
Subjt:  RSVYECADSGDHVNGDALFCNIKNTNLIPLLG

XP_022990172.1 uncharacterized protein LOC111487144 [Cucurbita maxima]6.2e-4875Show/hide
Query:  AAASSWLHSSRSRFVFLLLCSPLLVPIFCATFPFIFAIDLCIRLARHRRRICLRDSPEIERLQECEEGGCRPPLSEEIGGDSAEEIGLLQRYLDDQLLLV
        AAAS WL  SRSRF  LLLCSPLLVPIFCATFP I AI+LCIRLARHR RICLRDSPE ERL+ CEEGGCR  L E++G D  E+IGLL RYLDDQLLLV
Subjt:  AAASSWLHSSRSRFVFLLLCSPLLVPIFCATFPFIFAIDLCIRLARHRRRICLRDSPEIERLQECEEGGCRPPLSEEIGGDSAEEIGLLQRYLDDQLLLV

Query:  RSVYECADSGDHVNGDALFCNIKNTNLIPLLG
        RSVY C D  D ++GDA FC+I+N+NLIPLLG
Subjt:  RSVYECADSGDHVNGDALFCNIKNTNLIPLLG

XP_023550754.1 uncharacterized protein LOC111808798 [Cucurbita pepo subsp. pepo]5.1e-5077.27Show/hide
Query:  AAASSWLHSSRSRFVFLLLCSPLLVPIFCATFPFIFAIDLCIRLARHRRRICLRDSPEIERLQECEEGGCRPPLSEEIGGDSAEEIGLLQRYLDDQLLLV
        AAAS WL SSRSRF  LLLCSPLLVPIFCATFP I AI+LCIRLARHR RICLRDSPE ERL+ CEEGGCR  L E++G D  E+IGLLQRYLDDQLLLV
Subjt:  AAASSWLHSSRSRFVFLLLCSPLLVPIFCATFPFIFAIDLCIRLARHRRRICLRDSPEIERLQECEEGGCRPPLSEEIGGDSAEEIGLLQRYLDDQLLLV

Query:  RSVYECADSGDHVNGDALFCNIKNTNLIPLLG
        RSVYEC D  D ++GDA FC+I+N+NLIPLLG
Subjt:  RSVYECADSGDHVNGDALFCNIKNTNLIPLLG

TrEMBL top hitse value%identityAlignment
A0A2P5A925 Uncharacterized protein8.3e-2247.92Show/hide
Query:  MLAAA------SSWLHSSRSRFVFLLLCSPLLVPIFCATFPFIFAIDLCIRLARHRRRICLR----DSPEIERLQECEEGGCRPPLSEEIGGDSAEEIGL
        MLAAA      SSWL S R R++FL LCSP+L+P  CATFP + A +LC+RL R RRR   R    DS + +RL+ CEEG C    +   G    EE+GL
Subjt:  MLAAA------SSWLHSSRSRFVFLLLCSPLLVPIFCATFPFIFAIDLCIRLARHRRRICLR----DSPEIERLQECEEGGCRPPLSEEIGGDSAEEIGL

Query:  LQRYLDDQLLLVRSVYECADSGDHVNGDALFCNIKNTNLIPLLG
        LQRYL+DQL+LV S+Y+C   G+ V+GD       ++ L+P  G
Subjt:  LQRYLDDQLLLVRSVYECADSGDHVNGDALFCNIKNTNLIPLLG

A0A6J1DHX6 uncharacterized protein LOC1110202131.8e-4877.27Show/hide
Query:  AAASSWLHSSRSRFVFLLLCSPLLVPIFCATFPFIFAIDLCIRLARHRRRICLRDSPEIERLQECEEGGCRPPLSEEIGGDSAEEIGLLQRYLDDQLLLV
        AAASSWL SSR+RFVF+LLCSPLLVPIFCATFPFI AI+LCIRLARHRR I LRDSPEIERL+ CEEGGC   L E    D  EEIGLLQRYLDDQLLLV
Subjt:  AAASSWLHSSRSRFVFLLLCSPLLVPIFCATFPFIFAIDLCIRLARHRRRICLRDSPEIERLQECEEGGCRPPLSEEIGGDSAEEIGLLQRYLDDQLLLV

Query:  RSVYECADSGDHVNGDALFCNIKNTNLIPLLG
        RSVYEC D  + +NGDA FC+ KN+N+IPLLG
Subjt:  RSVYECADSGDHVNGDALFCNIKNTNLIPLLG

A0A6J1HEC7 uncharacterized protein LOC1114627192.5e-5077.27Show/hide
Query:  AAASSWLHSSRSRFVFLLLCSPLLVPIFCATFPFIFAIDLCIRLARHRRRICLRDSPEIERLQECEEGGCRPPLSEEIGGDSAEEIGLLQRYLDDQLLLV
        AAAS WL SSRSRF  LLLCSPLLVPIFCATFP I AI+LCIRLARHR RICLRDSPE ERL+ CEEGGCR  L E++G D  E+IGLLQRYLDDQLLLV
Subjt:  AAASSWLHSSRSRFVFLLLCSPLLVPIFCATFPFIFAIDLCIRLARHRRRICLRDSPEIERLQECEEGGCRPPLSEEIGGDSAEEIGLLQRYLDDQLLLV

Query:  RSVYECADSGDHVNGDALFCNIKNTNLIPLLG
        RSVYEC D  D ++GDA FC+I+N+NLIPLLG
Subjt:  RSVYECADSGDHVNGDALFCNIKNTNLIPLLG

A0A6J1JHX7 uncharacterized protein LOC1114871443.0e-4875Show/hide
Query:  AAASSWLHSSRSRFVFLLLCSPLLVPIFCATFPFIFAIDLCIRLARHRRRICLRDSPEIERLQECEEGGCRPPLSEEIGGDSAEEIGLLQRYLDDQLLLV
        AAAS WL  SRSRF  LLLCSPLLVPIFCATFP I AI+LCIRLARHR RICLRDSPE ERL+ CEEGGCR  L E++G D  E+IGLL RYLDDQLLLV
Subjt:  AAASSWLHSSRSRFVFLLLCSPLLVPIFCATFPFIFAIDLCIRLARHRRRICLRDSPEIERLQECEEGGCRPPLSEEIGGDSAEEIGLLQRYLDDQLLLV

Query:  RSVYECADSGDHVNGDALFCNIKNTNLIPLLG
        RSVY C D  D ++GDA FC+I+N+NLIPLLG
Subjt:  RSVYECADSGDHVNGDALFCNIKNTNLIPLLG

A0A6J5WCG8 Uncharacterized protein4.1e-2154.78Show/hide
Query:  MLAAASS---WLHSSRSRFVFLLLCSPLLVPIFCATFPFIFAIDLCIRLARHRRRICLRDSPE--IERLQECEEGGCRPPLSEEIGGDSAEEIGLLQRYL
        MLAAASS   WL + RSR++FLL+CSP+L+P  CATFPF+ A +LC+RL R RR      + E   ERL+ CEEG           G   EE+GLLQRYL
Subjt:  MLAAASS---WLHSSRSRFVFLLLCSPLLVPIFCATFPFIFAIDLCIRLARHRRRICLRDSPE--IERLQECEEGGCRPPLSEEIGGDSAEEIGLLQRYL

Query:  DDQLLLVRSVYECAD
        +DQLLLV SVY+C D
Subjt:  DDQLLLVRSVYECAD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G35430.1 unknown protein2.0e-2048.7Show/hide
Query:  WLHSSRSRFVFLLLCSPLLVPIFCATFPFIFAIDLCIRLARHRRRICLRDSPEIE--RLQECEEG-GCRPPLSEEIGGDSAEEIGLLQRYLDDQLLLVRS
        WL + RSRFVF LLCSPLL+PI CA+ P + A+++  RL R R     + + E +  RL+ CEEG GC        G D  EE GLLQRYL+DQL+LVRS
Subjt:  WLHSSRSRFVFLLLCSPLLVPIFCATFPFIFAIDLCIRLARHRRRICLRDSPEIE--RLQECEEG-GCRPPLSEEIGGDSAEEIGLLQRYLDDQLLLVRS

Query:  VYECADSGDHVNGDA
        VY+C +     + D+
Subjt:  VYECADSGDHVNGDA

AT4G09170.1 unknown protein1.8e-0838.21Show/hide
Query:  MLAAASSWLHSSR-SRFVFLLLCSPLLVPIFCATFPFIFAIDLCIRLARHRRR--------ICLRDSPEIERLQECEEGGCRPPLSEEIGGDSAEEIGLL
        ML  AS +  S+R SR +FL+LCSPLL    C + P + A+++  RL     +          L D  +  RL++CEEG     + EE   D  EE GLL
Subjt:  MLAAASSWLHSSR-SRFVFLLLCSPLLVPIFCATFPFIFAIDLCIRLARHRRR--------ICLRDSPEIERLQECEEGGCRPPLSEEIGGDSAEEIGLL

Query:  QRYLDDQLLLVRSVYECADSGDH
         RYLD+QL L R++++     DH
Subjt:  QRYLDDQLLLVRSVYECADSGDH


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTAGCCGCTGCCTCTTCTTGGCTTCATTCCAGCCGGAGCCGCTTTGTCTTTCTCTTGCTTTGTTCTCCCCTCCTCGTTCCCATTTTCTGCGCTACTTTCCCCTTCAT
CTTCGCCATAGATCTCTGCATCCGCCTTGCTCGTCACAGGAGAAGGATATGTCTTCGCGATTCACCAGAAATCGAACGGTTGCAGGAATGTGAGGAAGGCGGCTGCAGAC
CACCACTCTCGGAGGAGATTGGCGGCGACAGCGCGGAGGAGATCGGCCTATTACAGAGGTACTTGGATGATCAGCTACTGCTCGTTCGATCTGTTTATGAATGTGCTGAT
TCTGGTGACCACGTAAATGGGGATGCTCTATTTTGTAACATTAAAAACACTAATTTGATTCCACTATTAGGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGTTAGCCGCTGCCTCTTCTTGGCTTCATTCCAGCCGGAGCCGCTTTGTCTTTCTCTTGCTTTGTTCTCCCCTCCTCGTTCCCATTTTCTGCGCTACTTTCCCCTTCAT
CTTCGCCATAGATCTCTGCATCCGCCTTGCTCGTCACAGGAGAAGGATATGTCTTCGCGATTCACCAGAAATCGAACGGTTGCAGGAATGTGAGGAAGGCGGCTGCAGAC
CACCACTCTCGGAGGAGATTGGCGGCGACAGCGCGGAGGAGATCGGCCTATTACAGAGGTACTTGGATGATCAGCTACTGCTCGTTCGATCTGTTTATGAATGTGCTGAT
TCTGGTGACCACGTAAATGGGGATGCTCTATTTTGTAACATTAAAAACACTAATTTGATTCCACTATTAGGTTGA
Protein sequenceShow/hide protein sequence
MLAAASSWLHSSRSRFVFLLLCSPLLVPIFCATFPFIFAIDLCIRLARHRRRICLRDSPEIERLQECEEGGCRPPLSEEIGGDSAEEIGLLQRYLDDQLLLVRSVYECAD
SGDHVNGDALFCNIKNTNLIPLLG