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HG10005909 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10005909
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionGlutamate-gated kainate-type ion channel receptor subunit GluR5
Genome locationChr07:8151481..8151714
RNA-Seq ExpressionHG10005909
SyntenyHG10005909
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
EXC32449.1 hypothetical protein L484_012616 [Morus notabilis]3.9e-1064.71Show/hide
Query:  LFLTLVLALASVSSEATRVPIAYWEQMLPKKLPSPSSAPSKGTNSVA-PSSSKSMKVNGNLPVKDGNV
        LFLTL+ AL  + SEA+R+P + WEQMLPKKLPSP+S+PSKGTNSV+  SSSK + V+ NLP  DG V
Subjt:  LFLTLVLALASVSSEATRVPIAYWEQMLPKKLPSPSSAPSKGTNSVA-PSSSKSMKVNGNLPVKDGNV

KAE8646070.1 hypothetical protein Csa_015561 [Cucumis sativus]5.6e-2585.71Show/hide
Query:  MLLSFNLRFILFLTLVLALASVSSEATRVPIAYWEQMLPKKLPSPSSAPSKGTNSVAPSSSKSMKVNGNLPVKDGNV
        MLLSFN RFILFLTLVLAL S+S++A RVP  YWEQMLPKKLPSPSSAPSKGTN+VAPSSSK MKVNGNLP KDGNV
Subjt:  MLLSFNLRFILFLTLVLALASVSSEATRVPIAYWEQMLPKKLPSPSSAPSKGTNSVAPSSSKSMKVNGNLPVKDGNV

KAF9855135.1 hypothetical protein H0E87_006638 [Populus deltoides]1.5e-0955.84Show/hide
Query:  MLLSFNLRFILFLTLVLALASVSSEATRVPIAYWEQMLPKKLPSPSSAPSKGTNSVAPSSSKSMKVNGNLPVKDGNV
        ML+S+  + +LF   +LA   +SS+A+R+P AYWEQMLPKKLP+PSS+PSKGTNSV+ S S ++K + NL   DG V
Subjt:  MLLSFNLRFILFLTLVLALASVSSEATRVPIAYWEQMLPKKLPSPSSAPSKGTNSVAPSSSKSMKVNGNLPVKDGNV

KAG6607702.1 hypothetical protein SDJN03_01044, partial [Cucurbita argyrosperma subsp. sororia]6.6e-1876.62Show/hide
Query:  MLLSFNLRFILFLTLVLALASVSSEATRVPIAYWEQMLPKKLPSPSSAPSKGTNSVAPSSSKSMKVNGNLP--VKDG
        M LSF  RFI  L LVLALAS+SSEA RVP  YWEQMLPKKLP+PSSAPSKGTNSVA SS K++KV+GNLP  VKDG
Subjt:  MLLSFNLRFILFLTLVLALASVSSEATRVPIAYWEQMLPKKLPSPSSAPSKGTNSVAPSSSKSMKVNGNLP--VKDG

TYK23265.1 glutamate-gated kainate-type ion channel receptor subunit GluR5 [Cucumis melo var. makuwa]7.2e-2584.42Show/hide
Query:  MLLSFNLRFILFLTLVLALASVSSEATRVPIAYWEQMLPKKLPSPSSAPSKGTNSVAPSSSKSMKVNGNLPVKDGNV
        MLL+FN RFILFLTL+LAL S+SS+A RVP  YWEQMLPKKLPSPSSAPSKGTN+VAPSSSK MKVNGNLP KDGNV
Subjt:  MLLSFNLRFILFLTLVLALASVSSEATRVPIAYWEQMLPKKLPSPSSAPSKGTNSVAPSSSKSMKVNGNLPVKDGNV

TrEMBL top hitse value%identityAlignment
A0A0B2Q2G7 Uncharacterized protein9.3e-1063.08Show/hide
Query:  LTLVLALASVSSEATRVPIAYWEQMLPKKLPSPSSAPSKGTNSVAPSSSKSMKVNGNLPVKDGNV
        L L L    V SE +R+P  YWEQM+PKKLPSPSS+PSKGTNSV+PSSS + K N  LP+ DG V
Subjt:  LTLVLALASVSSEATRVPIAYWEQMLPKKLPSPSSAPSKGTNSVAPSSSKSMKVNGNLPVKDGNV

A0A5D3DI56 Glutamate-gated kainate-type ion channel receptor subunit GluR53.5e-2584.42Show/hide
Query:  MLLSFNLRFILFLTLVLALASVSSEATRVPIAYWEQMLPKKLPSPSSAPSKGTNSVAPSSSKSMKVNGNLPVKDGNV
        MLL+FN RFILFLTL+LAL S+SS+A RVP  YWEQMLPKKLPSPSSAPSKGTN+VAPSSSK MKVNGNLP KDGNV
Subjt:  MLLSFNLRFILFLTLVLALASVSSEATRVPIAYWEQMLPKKLPSPSSAPSKGTNSVAPSSSKSMKVNGNLPVKDGNV

A0A7N2MJW9 Uncharacterized protein1.9e-1058.44Show/hide
Query:  MLLSFNLRFILFLTLVLALASVSSEATRVPIAYWEQMLPKKLPSPSSAPSKGTNSVAPSSSKSMKVNGNLPVKDGNV
        ML S+  + +LF  L      V SEA+R+P  YWEQMLPKKLP PSS+PSKGTNS++ SSSK++K N NLP  DG V
Subjt:  MLLSFNLRFILFLTLVLALASVSSEATRVPIAYWEQMLPKKLPSPSSAPSKGTNSVAPSSSKSMKVNGNLPVKDGNV

A0A803PR73 Uncharacterized protein7.1e-1055.84Show/hide
Query:  MLLSFNLRFILFLTLVLALASVSSEATRVPIAYWEQMLPKKLPSPSSAPSKGTNSVAPSSSKSMKVNGNLPVKDGNV
        ML S+  ++ LF  L++A   + SEA+R+P  Y++QM+PKKLPSPSS+PSKGTNSV  SSSK++K + NLP  DG V
Subjt:  MLLSFNLRFILFLTLVLALASVSSEATRVPIAYWEQMLPKKLPSPSSAPSKGTNSVAPSSSKSMKVNGNLPVKDGNV

W9S9P5 Uncharacterized protein1.9e-1064.71Show/hide
Query:  LFLTLVLALASVSSEATRVPIAYWEQMLPKKLPSPSSAPSKGTNSVA-PSSSKSMKVNGNLPVKDGNV
        LFLTL+ AL  + SEA+R+P + WEQMLPKKLPSP+S+PSKGTNSV+  SSSK + V+ NLP  DG V
Subjt:  LFLTLVLALASVSSEATRVPIAYWEQMLPKKLPSPSSAPSKGTNSVA-PSSSKSMKVNGNLPVKDGNV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTACTTTCTTTCAACCTTAGATTCATTCTCTTCTTAACACTTGTTCTCGCTCTCGCTTCCGTTTCGTCAGAGGCGACGAGAGTTCCCATAGCGTATTGGGAGCAAAT
GTTGCCAAAGAAGTTACCATCGCCGTCGTCAGCACCGTCGAAAGGGACAAACTCCGTCGCTCCTTCCTCTTCTAAATCTATGAAAGTTAATGGGAATTTGCCCGTAAAGG
ACGGGAACGTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGTTACTTTCTTTCAACCTTAGATTCATTCTCTTCTTAACACTTGTTCTCGCTCTCGCTTCCGTTTCGTCAGAGGCGACGAGAGTTCCCATAGCGTATTGGGAGCAAAT
GTTGCCAAAGAAGTTACCATCGCCGTCGTCAGCACCGTCGAAAGGGACAAACTCCGTCGCTCCTTCCTCTTCTAAATCTATGAAAGTTAATGGGAATTTGCCCGTAAAGG
ACGGGAACGTTTAG
Protein sequenceShow/hide protein sequence
MLLSFNLRFILFLTLVLALASVSSEATRVPIAYWEQMLPKKLPSPSSAPSKGTNSVAPSSSKSMKVNGNLPVKDGNV