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HG10005914 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10005914
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionPHD finger protein EHD3
Genome locationChr07:8292178..8292468
RNA-Seq ExpressionHG10005914
SyntenyHG10005914
Gene Ontology termsGO:0046872 - metal ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022153712.1 PHD finger protein EHD3 [Momordica charantia]2.2e-3185.37Show/hide
Query:  MVIEDGKSNGDCTGRALEVNFVKREAGENGIGMGVLNVVTTGVPGTSDGFRTYKRRKQTRLTSGSECKGDSKTHVEAVGQLV
        MVIED KSNGDCTG ALEV FVK EAG+NG+GMGVLNVVT GVPGTSDGFRTYKRRK T+LTSGSECKGD KTHVEA GQL+
Subjt:  MVIEDGKSNGDCTGRALEVNFVKREAGENGIGMGVLNVVTTGVPGTSDGFRTYKRRKQTRLTSGSECKGDSKTHVEAVGQLV

XP_022936336.1 PHD finger protein EHD3-like [Cucurbita moschata]1.6e-2982.93Show/hide
Query:  MVIEDGKSNGDCTGRALEVNFVKREAGENGIGMGVLNVVTTGVPGTSDGFRTYKRRKQTRLTSGSECKGDSKTHVEAVGQLV
        M+IE+ KSNGD TGRALEV FVK EAGENGIGMG+LNVVT GVPGTSDGFRTYKRRKQT+LT GSECKG+ KTHVEA GQ V
Subjt:  MVIEDGKSNGDCTGRALEVNFVKREAGENGIGMGVLNVVTTGVPGTSDGFRTYKRRKQTRLTSGSECKGDSKTHVEAVGQLV

XP_022975583.1 PHD finger protein EHD3-like [Cucurbita maxima]1.6e-2982.93Show/hide
Query:  MVIEDGKSNGDCTGRALEVNFVKREAGENGIGMGVLNVVTTGVPGTSDGFRTYKRRKQTRLTSGSECKGDSKTHVEAVGQLV
        M+IE+ KSNGD TGRALEV FVK EAGENGIGMG+LNVVT GVPGTSDGFRTYKRRKQT+LT GSECKG+ KTHVEA GQ V
Subjt:  MVIEDGKSNGDCTGRALEVNFVKREAGENGIGMGVLNVVTTGVPGTSDGFRTYKRRKQTRLTSGSECKGDSKTHVEAVGQLV

XP_023535868.1 PHD finger protein EHD3-like [Cucurbita pepo subsp. pepo]1.6e-2982.93Show/hide
Query:  MVIEDGKSNGDCTGRALEVNFVKREAGENGIGMGVLNVVTTGVPGTSDGFRTYKRRKQTRLTSGSECKGDSKTHVEAVGQLV
        M+IE+ KSNGD TGRALEV FVK EAGENGIGMG+LNVVT GVPGTSDGFRTYKRRKQT+LT GSECKG+ KTHVEA GQ V
Subjt:  MVIEDGKSNGDCTGRALEVNFVKREAGENGIGMGVLNVVTTGVPGTSDGFRTYKRRKQTRLTSGSECKGDSKTHVEAVGQLV

XP_038897858.1 PHD finger protein EHD3 [Benincasa hispida]1.2e-3291.46Show/hide
Query:  MVIEDGKSNGDCTGRALEVNFVKREAGENGIGMGVLNVVTTGVPGTSDGFRTYKRRKQTRLTSGSECKGDSKTHVEAVGQLV
        MVIEDG SNGDCTG ALEV FVKREA ENGIG GVLNVVTTGVPGTSDGFRTYKRRKQ RLTSGSECKGDSKTHVEA GQLV
Subjt:  MVIEDGKSNGDCTGRALEVNFVKREAGENGIGMGVLNVVTTGVPGTSDGFRTYKRRKQTRLTSGSECKGDSKTHVEAVGQLV

TrEMBL top hitse value%identityAlignment
A0A6J1DJP9 PHD finger protein EHD31.1e-3185.37Show/hide
Query:  MVIEDGKSNGDCTGRALEVNFVKREAGENGIGMGVLNVVTTGVPGTSDGFRTYKRRKQTRLTSGSECKGDSKTHVEAVGQLV
        MVIED KSNGDCTG ALEV FVK EAG+NG+GMGVLNVVT GVPGTSDGFRTYKRRK T+LTSGSECKGD KTHVEA GQL+
Subjt:  MVIEDGKSNGDCTGRALEVNFVKREAGENGIGMGVLNVVTTGVPGTSDGFRTYKRRKQTRLTSGSECKGDSKTHVEAVGQLV

A0A6J1EE29 PHD finger protein EHD3-like1.7e-2979.76Show/hide
Query:  MVIEDGKSNGDCTGRALEVNFVKREAGENGIGMGVLNVVTTGVPGTSDGFRTYKRRKQTRLTSGSECKGDSKTHVEAVGQLVVR
        MVIEDG+SNG+CTGR LEV F+K  AG+NGIGMGVLNVVT GVPGTSDGFRTYKRRKQT+L  GSECKGD K HVEA  QLVV+
Subjt:  MVIEDGKSNGDCTGRALEVNFVKREAGENGIGMGVLNVVTTGVPGTSDGFRTYKRRKQTRLTSGSECKGDSKTHVEAVGQLVVR

A0A6J1F863 PHD finger protein EHD3-like7.7e-3082.93Show/hide
Query:  MVIEDGKSNGDCTGRALEVNFVKREAGENGIGMGVLNVVTTGVPGTSDGFRTYKRRKQTRLTSGSECKGDSKTHVEAVGQLV
        M+IE+ KSNGD TGRALEV FVK EAGENGIGMG+LNVVT GVPGTSDGFRTYKRRKQT+LT GSECKG+ KTHVEA GQ V
Subjt:  MVIEDGKSNGDCTGRALEVNFVKREAGENGIGMGVLNVVTTGVPGTSDGFRTYKRRKQTRLTSGSECKGDSKTHVEAVGQLV

A0A6J1IEM0 PHD finger protein EHD3-like7.7e-3082.93Show/hide
Query:  MVIEDGKSNGDCTGRALEVNFVKREAGENGIGMGVLNVVTTGVPGTSDGFRTYKRRKQTRLTSGSECKGDSKTHVEAVGQLV
        M+IE+ KSNGD TGRALEV FVK EAGENGIGMG+LNVVT GVPGTSDGFRTYKRRKQT+LT GSECKG+ KTHVEA GQ V
Subjt:  MVIEDGKSNGDCTGRALEVNFVKREAGENGIGMGVLNVVTTGVPGTSDGFRTYKRRKQTRLTSGSECKGDSKTHVEAVGQLV

A0A6J1IZG8 PHD finger protein EHD3-like8.0e-2778.31Show/hide
Query:  MVIEDGKSNGDCTGRALEVNFVKREAGENGIGMGVLNVVTT-GVPGTSDGFRTYKRRKQTRLTSGSECKGDSKTHVEAVGQLV
        MVIEDG+SNG+CTGR LEV F+K  AG+NGIGMGVLNVVT  GVPGTSDGFRTYKRRKQT+L  GSEC GD K HVEA  QLV
Subjt:  MVIEDGKSNGDCTGRALEVNFVKREAGENGIGMGVLNVVTT-GVPGTSDGFRTYKRRKQTRLTSGSECKGDSKTHVEAVGQLV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTATAGAAGATGGGAAAAGCAATGGGGATTGCACGGGACGCGCTTTGGAGGTCAATTTCGTGAAGAGGGAGGCAGGGGAAAACGGAATCGGAATGGGGGTTTTGAA
TGTTGTTACTACAGGGGTTCCAGGAACTAGCGATGGTTTTCGAACTTACAAGAGGCGGAAGCAGACTAGGTTGACCTCTGGGAGCGAATGCAAGGGAGATAGCAAGACTC
ACGTTGAAGCTGTTGGTCAATTAGTGGTTCGGGTTTCTCTCTCCCTTTCAATCTATTGCAAATTCAATTAA
mRNA sequenceShow/hide mRNA sequence
ATGGTTATAGAAGATGGGAAAAGCAATGGGGATTGCACGGGACGCGCTTTGGAGGTCAATTTCGTGAAGAGGGAGGCAGGGGAAAACGGAATCGGAATGGGGGTTTTGAA
TGTTGTTACTACAGGGGTTCCAGGAACTAGCGATGGTTTTCGAACTTACAAGAGGCGGAAGCAGACTAGGTTGACCTCTGGGAGCGAATGCAAGGGAGATAGCAAGACTC
ACGTTGAAGCTGTTGGTCAATTAGTGGTTCGGGTTTCTCTCTCCCTTTCAATCTATTGCAAATTCAATTAA
Protein sequenceShow/hide protein sequence
MVIEDGKSNGDCTGRALEVNFVKREAGENGIGMGVLNVVTTGVPGTSDGFRTYKRRKQTRLTSGSECKGDSKTHVEAVGQLVVRVSLSLSIYCKFN