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HG10005976 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10005976
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionLate embryogenesis abundant protein family protein, putative
Genome locationChr07:10423705..10425525
RNA-Seq ExpressionHG10005976
SyntenyHG10005976
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6598970.1 hypothetical protein SDJN03_08748, partial [Cucurbita argyrosperma subsp. sororia]1.1e-4271.24Show/hide
Query:  MASSTLFKS------FGA-AITRRSAISNPTLILASNPQFIHISPPQDGSEAKDAINPGANEGMMPSENMMKDKAYSTAEHVSEKTMDMAGMVSANAHEV
        M S TLFKS      FGA AI RRS  SN +L+ ASNP+ IH +PPQDGSEAKDAINP ANEGM P E+MM+DKAYSTAEHVSEKT DMAGM+SA A EV
Subjt:  MASSTLFKS------FGA-AITRRSAISNPTLILASNPQFIHISPPQDGSEAKDAINPGANEGMMPSENMMKDKAYSTAEHVSEKTMDMAGMVSANAHEV

Query:  SAKAKQAMEAAWETTKDTAQRAKNTLVDTANDSKEFVKANAKSVEKSMNTKNR
        SAKAK+AMEAA    KD+A RAK+T+V+T  DSK+FVKANAK+VEK MNTKNR
Subjt:  SAKAKQAMEAAWETTKDTAQRAKNTLVDTANDSKEFVKANAKSVEKSMNTKNR

XP_022933143.1 uncharacterized protein At4g13230 [Cucurbita moschata]2.7e-4472.55Show/hide
Query:  MASSTLFKS------FGA-AITRRSAISNPTLILASNPQFIHISPPQDGSEAKDAINPGANEGMMPSENMMKDKAYSTAEHVSEKTMDMAGMVSANAHEV
        M SSTLFKS      FGA AI RRS  SN +L+ ASNP+FIH +PPQDGSEAKDAINP ANEGM P E+MM+DKAYSTAEHVSEKT DMAGM+SA A EV
Subjt:  MASSTLFKS------FGA-AITRRSAISNPTLILASNPQFIHISPPQDGSEAKDAINPGANEGMMPSENMMKDKAYSTAEHVSEKTMDMAGMVSANAHEV

Query:  SAKAKQAMEAAWETTKDTAQRAKNTLVDTANDSKEFVKANAKSVEKSMNTKNR
        SAKAK+AMEAA    KD+A RAK+T+V+T  DSK+FVKANAK+VEK MNTKNR
Subjt:  SAKAKQAMEAAWETTKDTAQRAKNTLVDTANDSKEFVKANAKSVEKSMNTKNR

XP_022973925.1 uncharacterized protein At4g13230 [Cucurbita maxima]1.2e-4171.24Show/hide
Query:  MASSTLFKS------FGAA-ITRRSAISNPTLILASNPQFIHISPPQDGSEAKDAINPGANEGMMPSENMMKDKAYSTAEHVSEKTMDMAGMVSANAHEV
        M SSTLFKS      FGAA I  RS  SN +L  ASNP+FIH +PPQDGSEAKDAINP ANEGM   E MM+DKAYSTAEHVSEKT DMAGM+SA A EV
Subjt:  MASSTLFKS------FGAA-ITRRSAISNPTLILASNPQFIHISPPQDGSEAKDAINPGANEGMMPSENMMKDKAYSTAEHVSEKTMDMAGMVSANAHEV

Query:  SAKAKQAMEAAWETTKDTAQRAKNTLVDTANDSKEFVKANAKSVEKSMNTKNR
        SAKAKQAMEAA    KD+A RAK+++V+T  DSK+FVKANAK+VEK MNTKNR
Subjt:  SAKAKQAMEAAWETTKDTAQRAKNTLVDTANDSKEFVKANAKSVEKSMNTKNR

XP_023546410.1 uncharacterized protein At4g13230 [Cucurbita pepo subsp. pepo]5.6e-4270.59Show/hide
Query:  MASSTLFKS------FGA-AITRRSAISNPTLILASNPQFIHISPPQDGSEAKDAINPGANEGMMPSENMMKDKAYSTAEHVSEKTMDMAGMVSANAHEV
        M SSTLFKS      FGA AI RRS  SN +L+ ASNP+ IH +PPQDG EAKDAI P ANEGM P E+MM+DKAYSTAEHVSEKT DMAGM+SA A EV
Subjt:  MASSTLFKS------FGA-AITRRSAISNPTLILASNPQFIHISPPQDGSEAKDAINPGANEGMMPSENMMKDKAYSTAEHVSEKTMDMAGMVSANAHEV

Query:  SAKAKQAMEAAWETTKDTAQRAKNTLVDTANDSKEFVKANAKSVEKSMNTKNR
        SAKAK+AMEAA    KD+A RAK+T+V+T  DSK+FVKANAK+VEK MNTKNR
Subjt:  SAKAKQAMEAAWETTKDTAQRAKNTLVDTANDSKEFVKANAKSVEKSMNTKNR

XP_038889268.1 uncharacterized protein At4g13230-like [Benincasa hispida]2.0e-5583.44Show/hide
Query:  MASSTLFKS------FGAAITRRSAISNPTLILASNPQFIHISPPQDGSEAKDAINPGANEGMMPSENMMKDKAYSTAEHVSEKTMDMAGMVSANAHEVS
        MASSTLFK+      FGAAITRRS  SN TLILASNP+FIH +  QDGSEAKDAINPGANEGMMP ENMMKDKAYSTAEHVSEKT DMAGMVSA AH VS
Subjt:  MASSTLFKS------FGAAITRRSAISNPTLILASNPQFIHISPPQDGSEAKDAINPGANEGMMPSENMMKDKAYSTAEHVSEKTMDMAGMVSANAHEVS

Query:  AKAKQAMEAAWETTKDTAQRAKNTLVDTANDSKEFVKANAKSVEKSMNTKN
        AKAKQAMEAAW++ KDTAQRAK+TLVDTANDSK+FVKAN KSVEKSMNTKN
Subjt:  AKAKQAMEAAWETTKDTAQRAKNTLVDTANDSKEFVKANAKSVEKSMNTKN

TrEMBL top hitse value%identityAlignment
A0A2N9J2L7 Uncharacterized protein7.4e-2452.14Show/hide
Query:  FKSFGAAITRRSAISNPTLILASNPQFIHISP-PQDGSEAKDAINPGANEGMMPSENMMKDKAYSTAEHVSEKTMDMAGMVSANAHEVSAKAKQAMEAAW
        F   GAAI RR+   NP L +ASNP+ I  S  P+  S A DA+  GAN+     +  +K+KA+STAEHV++KT DMAGM+SA A +V+ KAKQ  + AW
Subjt:  FKSFGAAITRRSAISNPTLILASNPQFIHISP-PQDGSEAKDAINPGANEGMMPSENMMKDKAYSTAEHVSEKTMDMAGMVSANAHEVSAKAKQAMEAAW

Query:  ETTKDTAQRAKNTLVDTANDSKEFVKANAKSVEKSMNTKN
         T KDTAQ+AK+T++  A +SKE +K NA++V++SMNTKN
Subjt:  ETTKDTAQRAKNTLVDTANDSKEFVKANAKSVEKSMNTKN

A0A5C7GVU8 Uncharacterized protein7.7e-2151.85Show/hide
Query:  GAAITRRSAISNPTLILASNPQFIHISPPQDGSEAKDAINPGANEGMMPSENMMKDKAYSTAEHVSEKTMDMAGMVSANAHEVSAKAKQAMEAAWETTKD
        GAAI RRS + NP L LA+  ++I  +   DGS A +A+  GA+E M  + + MK+KAYSTA+ VS KT D+AG VS  A EV+ KAKQ ++ AW + KD
Subjt:  GAAITRRSAISNPTLILASNPQFIHISPPQDGSEAKDAINPGANEGMMPSENMMKDKAYSTAEHVSEKTMDMAGMVSANAHEVSAKAKQAMEAAWETTKD

Query:  TAQRAKNTLVDTANDSKEFVKANAKSVEKSMNTKN
        TAQ+AK+T++  A +SKE V+ NA+ ++KSMNTKN
Subjt:  TAQRAKNTLVDTANDSKEFVKANAKSVEKSMNTKN

A0A6J1CSM2 uncharacterized protein At4g13230-like1.2e-3461.39Show/hide
Query:  MASSTLFKS------FGAAITRRSAISNPTLILASNPQFIHISPPQD-----GSEAKDAINPGANEGMMPSENMMKDKAYSTAEHVSEKTMDMAGMVSAN
        MAS TL K+       GAAI RRS  SNP L+L SNP+F+H   PQD       EAKDAINPGANE MMP E+MM + AYSTA+HV EK  DM GMV + 
Subjt:  MASSTLFKS------FGAAITRRSAISNPTLILASNPQFIHISPPQD-----GSEAKDAINPGANEGMMPSENMMKDKAYSTAEHVSEKTMDMAGMVSAN

Query:  AHEVSAKAKQAMEAAWETTKDTAQRAKNTLVDTANDSKEFVKANAKSVEKSMNTKNRP
          E+S KAKQ MEAAW    D+AQRAK+T+V+   +SKEFVKANA+SV+KSMNTKNRP
Subjt:  AHEVSAKAKQAMEAAWETTKDTAQRAKNTLVDTANDSKEFVKANAKSVEKSMNTKNRP

A0A6J1F3W7 uncharacterized protein At4g132301.3e-4472.55Show/hide
Query:  MASSTLFKS------FGA-AITRRSAISNPTLILASNPQFIHISPPQDGSEAKDAINPGANEGMMPSENMMKDKAYSTAEHVSEKTMDMAGMVSANAHEV
        M SSTLFKS      FGA AI RRS  SN +L+ ASNP+FIH +PPQDGSEAKDAINP ANEGM P E+MM+DKAYSTAEHVSEKT DMAGM+SA A EV
Subjt:  MASSTLFKS------FGA-AITRRSAISNPTLILASNPQFIHISPPQDGSEAKDAINPGANEGMMPSENMMKDKAYSTAEHVSEKTMDMAGMVSANAHEV

Query:  SAKAKQAMEAAWETTKDTAQRAKNTLVDTANDSKEFVKANAKSVEKSMNTKNR
        SAKAK+AMEAA    KD+A RAK+T+V+T  DSK+FVKANAK+VEK MNTKNR
Subjt:  SAKAKQAMEAAWETTKDTAQRAKNTLVDTANDSKEFVKANAKSVEKSMNTKNR

A0A6J1ICL4 uncharacterized protein At4g132306.0e-4271.24Show/hide
Query:  MASSTLFKS------FGAA-ITRRSAISNPTLILASNPQFIHISPPQDGSEAKDAINPGANEGMMPSENMMKDKAYSTAEHVSEKTMDMAGMVSANAHEV
        M SSTLFKS      FGAA I  RS  SN +L  ASNP+FIH +PPQDGSEAKDAINP ANEGM   E MM+DKAYSTAEHVSEKT DMAGM+SA A EV
Subjt:  MASSTLFKS------FGAA-ITRRSAISNPTLILASNPQFIHISPPQDGSEAKDAINPGANEGMMPSENMMKDKAYSTAEHVSEKTMDMAGMVSANAHEV

Query:  SAKAKQAMEAAWETTKDTAQRAKNTLVDTANDSKEFVKANAKSVEKSMNTKNR
        SAKAKQAMEAA    KD+A RAK+++V+T  DSK+FVKANAK+VEK MNTKNR
Subjt:  SAKAKQAMEAAWETTKDTAQRAKNTLVDTANDSKEFVKANAKSVEKSMNTKNR

SwissProt top hitse value%identityAlignment
Q8LFD5 Uncharacterized protein At4g132303.6e-0741.25Show/hide
Query:  DKAYSTAEHVSEKTMDMAGMVSANAHEVSAKAKQAMEAAWETTKDTAQRAKNTLVDTANDSKEFVKANAKSVEKSMNTKN
        DKA    + V++K  + A  +S  A  +  KAK   E AW+  KDT ++ K+T+     ++KE +KA AK+VE+SMNTKN
Subjt:  DKAYSTAEHVSEKTMDMAGMVSANAHEVSAKAKQAMEAAWETTKDTAQRAKNTLVDTANDSKEFVKANAKSVEKSMNTKN

Arabidopsis top hitse value%identityAlignment
AT4G13230.1 Late embryogenesis abundant protein (LEA) family protein2.5e-0841.25Show/hide
Query:  DKAYSTAEHVSEKTMDMAGMVSANAHEVSAKAKQAMEAAWETTKDTAQRAKNTLVDTANDSKEFVKANAKSVEKSMNTKN
        DKA    + V++K  + A  +S  A  +  KAK   E AW+  KDT ++ K+T+     ++KE +KA AK+VE+SMNTKN
Subjt:  DKAYSTAEHVSEKTMDMAGMVSANAHEVSAKAKQAMEAAWETTKDTAQRAKNTLVDTANDSKEFVKANAKSVEKSMNTKN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAAGCTCCACCCTCTTCAAAAGCTTTGGTGCTGCAATTACAAGAAGATCAGCAATCTCCAACCCTACTCTCATTTTGGCTTCTAATCCTCAATTTATTCATATAAG
TCCACCACAAGATGGGTCAGAAGCTAAAGATGCCATTAACCCAGGAGCAAATGAAGGAATGATGCCCAGTGAAAATATGATGAAAGATAAGGCTTACTCTACTGCAGAAC
ATGTGAGTGAAAAGACAATGGATATGGCAGGAATGGTCAGTGCAAACGCACATGAGGTTTCAGCAAAGGCAAAGCAAGCAATGGAAGCAGCATGGGAAACAACAAAGGAC
ACAGCCCAAAGGGCAAAAAACACATTGGTTGACACTGCCAATGACTCCAAGGAATTTGTCAAAGCAAATGCTAAATCTGTTGAGAAGAGCATGAACACCAAGAACCGTCC
TTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCAAGCTCCACCCTCTTCAAAAGCTTTGGTGCTGCAATTACAAGAAGATCAGCAATCTCCAACCCTACTCTCATTTTGGCTTCTAATCCTCAATTTATTCATATAAG
TCCACCACAAGATGGGTCAGAAGCTAAAGATGCCATTAACCCAGGAGCAAATGAAGGAATGATGCCCAGTGAAAATATGATGAAAGATAAGGCTTACTCTACTGCAGAAC
ATGTGAGTGAAAAGACAATGGATATGGCAGGAATGGTCAGTGCAAACGCACATGAGGTTTCAGCAAAGGCAAAGCAAGCAATGGAAGCAGCATGGGAAACAACAAAGGAC
ACAGCCCAAAGGGCAAAAAACACATTGGTTGACACTGCCAATGACTCCAAGGAATTTGTCAAAGCAAATGCTAAATCTGTTGAGAAGAGCATGAACACCAAGAACCGTCC
TTAA
Protein sequenceShow/hide protein sequence
MASSTLFKSFGAAITRRSAISNPTLILASNPQFIHISPPQDGSEAKDAINPGANEGMMPSENMMKDKAYSTAEHVSEKTMDMAGMVSANAHEVSAKAKQAMEAAWETTKD
TAQRAKNTLVDTANDSKEFVKANAKSVEKSMNTKNRP