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HG10005989 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10005989
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationChr07:10704321..10704473
RNA-Seq ExpressionHG10005989
SyntenyHG10005989
Gene Ontology termsGO:0090304 - nucleic acid metabolic process (biological process)
GO:0140640 - catalytic activity, acting on a nucleic acid (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_010682691.2 PREDICTED: uncharacterized protein LOC104897505 [Beta vulgaris subsp. vulgaris]2.4e-0550Show/hide
Query:  MLANRLKGILKDIVHPSQPAFVPHLLISDKALIGCECFHVIKNGKKGKVG
        +LANR+K +L D++H SQ  FVP  LI+D  L+  ECFH ++  K GK G
Subjt:  MLANRLKGILKDIVHPSQPAFVPHLLISDKALIGCECFHVIKNGKKGKVG
XP_022155286.1 uncharacterized protein LOC111022423 [Momordica charantia]3.2e-0550Show/hide
Query:  MLANRLKGILKDIVHPSQPAFVPHLLISDKALIGCECFHVIKNGKKGKVG
        +LANRLK +L +++ P+Q AFVP  LI+D A++G EC H +    KGK+G
Subjt:  MLANRLKGILKDIVHPSQPAFVPHLLISDKALIGCECFHVIKNGKKGKVG
XP_022157437.1 uncharacterized protein LOC111024135 [Momordica charantia]2.4e-0551.02Show/hide
Query:  LANRLKGILKDIVHPSQPAFVPHLLISDKALIGCECFHVIKNGKKGKVG
        LANRLK ++  ++ P+Q AFVP   I+D A+IG EC + IKN + GK+G
Subjt:  LANRLKGILKDIVHPSQPAFVPHLLISDKALIGCECFHVIKNGKKGKVG
XP_035544594.1 uncharacterized protein LOC118347987 [Juglans regia]8.3e-0654Show/hide
Query:  MLANRLKGILKDIVHPSQPAFVPHLLISDKALIGCECFHVIKNGKKGKVG
        +LANRLKG+L +I+ P+Q AF+P  LISD  L+  E  H +K  KKGK+G
Subjt:  MLANRLKGILKDIVHPSQPAFVPHLLISDKALIGCECFHVIKNGKKGKVG
XP_035546588.1 uncharacterized protein LOC118348634 [Juglans regia]8.3e-0654Show/hide
Query:  MLANRLKGILKDIVHPSQPAFVPHLLISDKALIGCECFHVIKNGKKGKVG
        +LANRLKG+L +I+ P+Q AF+P  LISD  L+  E  H +K  KKGK+G
Subjt:  MLANRLKGILKDIVHPSQPAFVPHLLISDKALIGCECFHVIKNGKKGKVG
TrEMBL top hitse value%identityAlignment
A0A2K3LQD7 Ribonuclease H (Fragment)1.5e-0556Show/hide
Query:  MLANRLKGILKDIVHPSQPAFVPHLLISDKALIGCECFHVIKNGKKGKVG
        ++ANR+K IL DI+   Q AFV   LI+D ALI  ECFH +K  KKGK G
Subjt:  MLANRLKGILKDIVHPSQPAFVPHLLISDKALIGCECFHVIKNGKKGKVG
A0A5B7AER2 Reverse transcriptase domain-containing protein9.0e-0658Show/hide
Query:  MLANRLKGILKDIVHPSQPAFVPHLLISDKALIGCECFHVIKNGKKGKVG
        MLANRLK IL DI+  SQ AFVP  LIS   L+  E  H +KN +KGK+G
Subjt:  MLANRLKGILKDIVHPSQPAFVPHLLISDKALIGCECFHVIKNGKKGKVG
A0A6J1DUG8 uncharacterized protein LOC1110241351.2e-0551.02Show/hide
Query:  LANRLKGILKDIVHPSQPAFVPHLLISDKALIGCECFHVIKNGKKGKVG
        LANRLK ++  ++ P+Q AFVP   I+D A+IG EC + IKN + GK+G
Subjt:  LANRLKGILKDIVHPSQPAFVPHLLISDKALIGCECFHVIKNGKKGKVG
A0A6P9EAZ3 uncharacterized protein LOC1183479874.0e-0654Show/hide
Query:  MLANRLKGILKDIVHPSQPAFVPHLLISDKALIGCECFHVIKNGKKGKVG
        +LANRLKG+L +I+ P+Q AF+P  LISD  L+  E  H +K  KKGK+G
Subjt:  MLANRLKGILKDIVHPSQPAFVPHLLISDKALIGCECFHVIKNGKKGKVG
A0A6P9ERU8 uncharacterized protein LOC1183486344.0e-0654Show/hide
Query:  MLANRLKGILKDIVHPSQPAFVPHLLISDKALIGCECFHVIKNGKKGKVG
        +LANRLKG+L +I+ P+Q AF+P  LISD  L+  E  H +K  KKGK+G
Subjt:  MLANRLKGILKDIVHPSQPAFVPHLLISDKALIGCECFHVIKNGKKGKVG
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGGCTAATAGATTGAAAGGAATTCTTAAGGATATTGTCCATCCCTCTCAGCCTGCGTTTGTCCCTCATCTTCTTATCTCGGATAAAGCTCTAATTGGTTGTGAGTG
CTTCCATGTGATTAAAAATGGAAAGAAAGGCAAGGTGGGTTAG
mRNA sequenceShow/hide mRNA sequence
ATGTTGGCTAATAGATTGAAAGGAATTCTTAAGGATATTGTCCATCCCTCTCAGCCTGCGTTTGTCCCTCATCTTCTTATCTCGGATAAAGCTCTAATTGGTTGTGAGTG
CTTCCATGTGATTAAAAATGGAAAGAAAGGCAAGGTGGGTTAG
Protein sequenceShow/hide protein sequence
MLANRLKGILKDIVHPSQPAFVPHLLISDKALIGCECFHVIKNGKKGKVG