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HG10005998 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10005998
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionEnzymatic polyprotein
Genome locationChr07:11022133..11022540
RNA-Seq ExpressionHG10005998
SyntenyHG10005998
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0050194.1 polyprotein [Cucumis melo var. makuwa]2.7e-0635.04Show/hide
Query:  SSENEIPKEGVRTCGGKCINVLTDEQEVLFQAIDHIDNDELKTTVLRTLKQSLESSSSKPPPKRKEIVQLSLAEI--LQRKEFQKTTSIEDLQNEINSLK
        SSENE   +    C G CINVLT  QE L   I+ +D++ ++  +L  L++ LE+    P  K K+ +  S   +  L  KE      + DLQ+EI  LK
Subjt:  SSENEIPKEGVRTCGGKCINVLTDEQEVLFQAIDHIDNDELKTTVLRTLKQSLESSSSKPPPKRKEIVQLSLAEI--LQRKEFQKTTSIEDLQNEINSLK

Query:  KGVSQNRFEIQEIKNSL
        K +++NR +I  ++N++
Subjt:  KGVSQNRFEIQEIKNSL

KAA0052109.1 Enzymatic polyprotein [Cucumis melo var. makuwa]7.7e-0633.33Show/hide
Query:  EENFNFSSENEIPKEGVRTCGGKC-------INVLTDEQEVLFQAIDHIDNDELKTTVLRTLKQSLESSSSKPPPKRKEIVQLSLAEILQR--KEFQKTT
        EE F +S  +    EG   C G+C       INV+T +QE LF  I+ I ++E K T L  LKQSLE  +  P    +  +  S  +IL R   E +   
Subjt:  EENFNFSSENEIPKEGVRTCGGKC-------INVLTDEQEVLFQAIDHIDNDELKTTVLRTLKQSLESSSSKPPPKRKEIVQLSLAEILQR--KEFQKTT

Query:  SIEDLQNEINSLKKGVSQNRFEIQEIKNSLNS
         +EDL +E+ +LK+ V++N+  +  ++N+  +
Subjt:  SIEDLQNEINSLKKGVSQNRFEIQEIKNSLNS

KAA0059217.1 Enzymatic polyprotein [Cucumis melo var. makuwa]1.3e-0535.83Show/hide
Query:  EENFNFSSENEIPKEGVRTCGGKC-------INVLTDEQEVLFQAIDHIDNDELKTTVLRTLKQSLESSSSKPPPKRKEIVQLSLAEILQR--KEFQKTT
        EE F +S  +    EG   C G+C       INV+T +QE LF  I+ I ++E K T L  LKQSLE  +  P    +  +  S  +IL R   E +   
Subjt:  EENFNFSSENEIPKEGVRTCGGKC-------INVLTDEQEVLFQAIDHIDNDELKTTVLRTLKQSLESSSSKPPPKRKEIVQLSLAEILQR--KEFQKTT

Query:  SIEDLQNEINSLKKGVSQNR
         +EDL +E+ +LK+ V++N+
Subjt:  SIEDLQNEINSLKKGVSQNR

TYJ98087.1 Enzymatic polyprotein [Cucumis melo var. makuwa]7.7e-0633.33Show/hide
Query:  EENFNFSSENEIPKEGVRTCGGKC-------INVLTDEQEVLFQAIDHIDNDELKTTVLRTLKQSLESSSSKPPPKRKEIVQLSLAEILQR--KEFQKTT
        EE F +S  +    EG   C G+C       INV+T +QE LF  I+ I ++E K T L  LKQSLE  +  P    +  +  S  +IL R   E +   
Subjt:  EENFNFSSENEIPKEGVRTCGGKC-------INVLTDEQEVLFQAIDHIDNDELKTTVLRTLKQSLESSSSKPPPKRKEIVQLSLAEILQR--KEFQKTT

Query:  SIEDLQNEINSLKKGVSQNRFEIQEIKNSLNS
         +EDL +E+ +LK+ V++N+  +  ++N+  +
Subjt:  SIEDLQNEINSLKKGVSQNRFEIQEIKNSLNS

TYJ98215.1 polyprotein [Cucumis melo var. makuwa]2.7e-0635.04Show/hide
Query:  SSENEIPKEGVRTCGGKCINVLTDEQEVLFQAIDHIDNDELKTTVLRTLKQSLESSSSKPPPKRKEIVQLSLAEI--LQRKEFQKTTSIEDLQNEINSLK
        SSENE   +    C G CINVLT  QE L   I+ +D++ ++  +L  L++ LE+    P  K K+ +  S   +  L  KE      + DLQ+EI  LK
Subjt:  SSENEIPKEGVRTCGGKCINVLTDEQEVLFQAIDHIDNDELKTTVLRTLKQSLESSSSKPPPKRKEIVQLSLAEI--LQRKEFQKTTSIEDLQNEINSLK

Query:  KGVSQNRFEIQEIKNSL
        K +++NR +I  ++N++
Subjt:  KGVSQNRFEIQEIKNSL

TrEMBL top hitse value%identityAlignment
A0A5A7U4M8 Polyprotein1.3e-0635.04Show/hide
Query:  SSENEIPKEGVRTCGGKCINVLTDEQEVLFQAIDHIDNDELKTTVLRTLKQSLESSSSKPPPKRKEIVQLSLAEI--LQRKEFQKTTSIEDLQNEINSLK
        SSENE   +    C G CINVLT  QE L   I+ +D++ ++  +L  L++ LE+    P  K K+ +  S   +  L  KE      + DLQ+EI  LK
Subjt:  SSENEIPKEGVRTCGGKCINVLTDEQEVLFQAIDHIDNDELKTTVLRTLKQSLESSSSKPPPKRKEIVQLSLAEI--LQRKEFQKTTSIEDLQNEINSLK

Query:  KGVSQNRFEIQEIKNSL
        K +++NR +I  ++N++
Subjt:  KGVSQNRFEIQEIKNSL

A0A5A7UF59 Enzymatic polyprotein3.8e-0633.33Show/hide
Query:  EENFNFSSENEIPKEGVRTCGGKC-------INVLTDEQEVLFQAIDHIDNDELKTTVLRTLKQSLESSSSKPPPKRKEIVQLSLAEILQR--KEFQKTT
        EE F +S  +    EG   C G+C       INV+T +QE LF  I+ I ++E K T L  LKQSLE  +  P    +  +  S  +IL R   E +   
Subjt:  EENFNFSSENEIPKEGVRTCGGKC-------INVLTDEQEVLFQAIDHIDNDELKTTVLRTLKQSLESSSSKPPPKRKEIVQLSLAEILQR--KEFQKTT

Query:  SIEDLQNEINSLKKGVSQNRFEIQEIKNSLNS
         +EDL +E+ +LK+ V++N+  +  ++N+  +
Subjt:  SIEDLQNEINSLKKGVSQNRFEIQEIKNSLNS

A0A5D3BEY3 Enzymatic polyprotein6.4e-0635.83Show/hide
Query:  EENFNFSSENEIPKEGVRTCGGKC-------INVLTDEQEVLFQAIDHIDNDELKTTVLRTLKQSLESSSSKPPPKRKEIVQLSLAEILQR--KEFQKTT
        EE F +S  +    EG   C G+C       INV+T +QE LF  I+ I ++E K T L  LKQSLE  +  P    +  +  S  +IL R   E +   
Subjt:  EENFNFSSENEIPKEGVRTCGGKC-------INVLTDEQEVLFQAIDHIDNDELKTTVLRTLKQSLESSSSKPPPKRKEIVQLSLAEILQR--KEFQKTT

Query:  SIEDLQNEINSLKKGVSQNR
         +EDL +E+ +LK+ V++N+
Subjt:  SIEDLQNEINSLKKGVSQNR

A0A5D3BG41 Enzymatic polyprotein3.8e-0633.33Show/hide
Query:  EENFNFSSENEIPKEGVRTCGGKC-------INVLTDEQEVLFQAIDHIDNDELKTTVLRTLKQSLESSSSKPPPKRKEIVQLSLAEILQR--KEFQKTT
        EE F +S  +    EG   C G+C       INV+T +QE LF  I+ I ++E K T L  LKQSLE  +  P    +  +  S  +IL R   E +   
Subjt:  EENFNFSSENEIPKEGVRTCGGKC-------INVLTDEQEVLFQAIDHIDNDELKTTVLRTLKQSLESSSSKPPPKRKEIVQLSLAEILQR--KEFQKTT

Query:  SIEDLQNEINSLKKGVSQNRFEIQEIKNSLNS
         +EDL +E+ +LK+ V++N+  +  ++N+  +
Subjt:  SIEDLQNEINSLKKGVSQNRFEIQEIKNSLNS

A0A5D3BI97 Polyprotein1.3e-0635.04Show/hide
Query:  SSENEIPKEGVRTCGGKCINVLTDEQEVLFQAIDHIDNDELKTTVLRTLKQSLESSSSKPPPKRKEIVQLSLAEI--LQRKEFQKTTSIEDLQNEINSLK
        SSENE   +    C G CINVLT  QE L   I+ +D++ ++  +L  L++ LE+    P  K K+ +  S   +  L  KE      + DLQ+EI  LK
Subjt:  SSENEIPKEGVRTCGGKCINVLTDEQEVLFQAIDHIDNDELKTTVLRTLKQSLESSSSKPPPKRKEIVQLSLAEI--LQRKEFQKTTSIEDLQNEINSLK

Query:  KGVSQNRFEIQEIKNSL
        K +++NR +I  ++N++
Subjt:  KGVSQNRFEIQEIKNSL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATGAAGAAAATTTCAATTTTTCAAGTGAAAATGAGATTCCTAAAGAAGGAGTTAGAACCTGTGGAGGAAAATGTATAAATGTTCTCACAGATGAACAAGAAGTTTT
ATTTCAAGCCATAGACCATATCGATAACGATGAATTAAAAACAACAGTTCTAAGAACTCTTAAGCAATCCCTTGAAAGTTCTAGTTCAAAACCTCCTCCTAAGAGAAAAG
AAATAGTCCAATTATCTCTTGCTGAGATTTTACAAAGAAAAGAATTTCAAAAAACCACTTCTATTGAAGATTTACAAAATGAAATAAATTCTTTGAAAAAAGGAGTTTCT
CAAAATCGTTTTGAAATCCAAGAAATTAAGAACAGTTTAAATTCACTAATTTTCAAAAAGAAGATTCTTCTGATGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGATGAAGAAAATTTCAATTTTTCAAGTGAAAATGAGATTCCTAAAGAAGGAGTTAGAACCTGTGGAGGAAAATGTATAAATGTTCTCACAGATGAACAAGAAGTTTT
ATTTCAAGCCATAGACCATATCGATAACGATGAATTAAAAACAACAGTTCTAAGAACTCTTAAGCAATCCCTTGAAAGTTCTAGTTCAAAACCTCCTCCTAAGAGAAAAG
AAATAGTCCAATTATCTCTTGCTGAGATTTTACAAAGAAAAGAATTTCAAAAAACCACTTCTATTGAAGATTTACAAAATGAAATAAATTCTTTGAAAAAAGGAGTTTCT
CAAAATCGTTTTGAAATCCAAGAAATTAAGAACAGTTTAAATTCACTAATTTTCAAAAAGAAGATTCTTCTGATGTAG
Protein sequenceShow/hide protein sequence
MDEENFNFSSENEIPKEGVRTCGGKCINVLTDEQEVLFQAIDHIDNDELKTTVLRTLKQSLESSSSKPPPKRKEIVQLSLAEILQRKEFQKTTSIEDLQNEINSLKKGVS
QNRFEIQEIKNSLNSLIFKKKILLM