; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10006010 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10006010
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionPentatricopeptide repeat-containing protein
Genome locationChr07:11325878..11326950
RNA-Seq ExpressionHG10006010
SyntenyHG10006010
Gene Ontology termsGO:0005515 - protein binding (molecular function)
InterPro domainsIPR002885 - Pentatricopeptide repeat
IPR011990 - Tetratricopeptide-like helical domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0033642.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa]7.1e-10764.77Show/hide
Query:  MHSLSLVSSRIVCRLFSTSFIVHRTIWNWSFCSDDRFEFVVEHHKKGLEGSEFGDFADENSDSCEIESGRWDDFSFRRGFLKDAKADAEKVIEILKQDGP
        M+SLSLVSSRIVCRLFSTSFIV RTIWN SFCSDDRF+FVVE          F  FAD NSDS E +S RWDDFS RR FLKDAK DAEKVIEILKQDGP
Subjt:  MHSLSLVSSRIVCRLFSTSFIVHRTIWNWSFCSDDRFEFVVEHHKKGLEGSEFGDFADENSDSCEIESGRWDDFSFRRGFLKDAKADAEKVIEILKQDGP

Query:  GFDTFLALDELQLQVSGVLVGEVLKGILKSTSDLNKTSVQNWGTSF---------------SYG---------PEFKAMWRLLDEMTEKGYPVTARTFMI
        GFDTFLALDEL+LQVSGVLVGEVLKGILKSTS LNKT     G  F               SY           EFKAMWRLLDEMTEKGYPVTARTFMI
Subjt:  GFDTFLALDELQLQVSGVLVGEVLKGILKSTSDLNKTSVQNWGTSF---------------SYG---------PEFKAMWRLLDEMTEKGYPVTARTFMI

Query:  LICTCGDAGLARKVVE----------------------------------------------------------RCKLGKLDQFHRLLDGMARNGFSPDF
        LICTCGDAGLA+KVVE                                                          RCKLGKLDQFHRLLD MAR GFSPDF
Subjt:  LICTCGDAGLARKVVE----------------------------------------------------------RCKLGKLDQFHRLLDGMARNGFSPDF

Query:  HTYNILLYVLSKGDKPLAALNLLNHMREVGLGPNVLQFMTLINGLSRAGNLD
        HTYNILLYVL KGDKPLAALNLLNHMREVG GPNVL F TLINGLSRAGNLD
Subjt:  HTYNILLYVLSKGDKPLAALNLLNHMREVGLGPNVLQFMTLINGLSRAGNLD

XP_008439226.1 PREDICTED: pentatricopeptide repeat-containing protein At1g55630-like [Cucumis melo]9.3e-10764.49Show/hide
Query:  MHSLSLVSSRIVCRLFSTSFIVHRTIWNWSFCSDDRFEFVVEHHKKGLEGSEFGDFADENSDSCEIESGRWDDFSFRRGFLKDAKADAEKVIEILKQDGP
        M+SLSLVSSRIVCRLFSTSFIV RTIWN SFCSDDRF+FVVE          F  FAD NSDS E +S RWDDFS RR FLKDAK DAEKVIEILKQDGP
Subjt:  MHSLSLVSSRIVCRLFSTSFIVHRTIWNWSFCSDDRFEFVVEHHKKGLEGSEFGDFADENSDSCEIESGRWDDFSFRRGFLKDAKADAEKVIEILKQDGP

Query:  GFDTFLALDELQLQVSGVLVGEVLKGILKSTSDLNKTSVQNWGTSF---------------SYG---------PEFKAMWRLLDEMTEKGYPVTARTFMI
        GFDTFLALDEL+LQVSGVLVGEVLKGILKSTS LNKT     G  F               SY           EFKAMWRLLDEMTEKGYPVTARTFMI
Subjt:  GFDTFLALDELQLQVSGVLVGEVLKGILKSTSDLNKTSVQNWGTSF---------------SYG---------PEFKAMWRLLDEMTEKGYPVTARTFMI

Query:  LICTCGDAGLARKVVE----------------------------------------------------------RCKLGKLDQFHRLLDGMARNGFSPDF
        LICTCGDAGLA+KVVE                                                          RCKLGKLDQFHRLLD MAR GFSPDF
Subjt:  LICTCGDAGLARKVVE----------------------------------------------------------RCKLGKLDQFHRLLDGMARNGFSPDF

Query:  HTYNILLYVLSKGDKPLAALNLLNHMREVGLGPNVLQFMTLINGLSRAGNLD
        HTYNILLYVL KGDKPLAALNLLNHMREVG GPN+L F TLINGLSRAGNLD
Subjt:  HTYNILLYVLSKGDKPLAALNLLNHMREVGLGPNVLQFMTLINGLSRAGNLD

XP_023552266.1 pentatricopeptide repeat-containing protein At1g55630-like isoform X1 [Cucurbita pepo subsp. pepo]2.5e-10463.64Show/hide
Query:  MHSLSLVSSRIVCRLFSTSFIVHRTIWNWSFCSDDRFEFVVEHHKKGLEGSEFGDFADENSDSCEIESGRWDDFSFRRGFLKDAKADAEKVIEILKQDGP
        M+SLSLVSSRIVCRLFSTSFIV RTI N SF  DDRFEFVVE +KK LEGSEFG F DENSDSCEI S R DD S RRGFL+ AK  AEKVIEILKQDGP
Subjt:  MHSLSLVSSRIVCRLFSTSFIVHRTIWNWSFCSDDRFEFVVEHHKKGLEGSEFGDFADENSDSCEIESGRWDDFSFRRGFLKDAKADAEKVIEILKQDGP

Query:  GFDTFLALDELQLQVSGVLVGEVLKGILKSTSDLNKTSVQNWG---------------TSFSYG---------PEFKAMWRLLDEMTEKGYPVTARTFMI
        GFDT LALDELQLQVSGVLV EVLKGIL+S + LNKT     G               T+ SY           EFKAMWRLLDEMTEKGYPVTARTFMI
Subjt:  GFDTFLALDELQLQVSGVLVGEVLKGILKSTSDLNKTSVQNWG---------------TSFSYG---------PEFKAMWRLLDEMTEKGYPVTARTFMI

Query:  LICTCGDAGLARKVVE----------------------------------------------------------RCKLGKLDQFHRLLDGMARNGFSPDF
        LICTCGDAGLARKVVE                                                          RCKLGKLDQFHRLLD MARNGFSPD+
Subjt:  LICTCGDAGLARKVVE----------------------------------------------------------RCKLGKLDQFHRLLDGMARNGFSPDF

Query:  HTYNILLYVLSKGDKPLAALNLLNHMREVGLGPNVLQFMTLINGLSRAGNLD
        HTYNILL+VL KGDKPLAALNLLNHMREVG  P++L F TLI+GLSRAGNLD
Subjt:  HTYNILLYVLSKGDKPLAALNLLNHMREVGLGPNVLQFMTLINGLSRAGNLD

XP_023552269.1 pentatricopeptide repeat-containing protein At1g55630-like isoform X4 [Cucurbita pepo subsp. pepo]2.5e-10463.92Show/hide
Query:  MHSLSLVSSRIVCRLFSTSFIVHRTIWNWSFCSDDRFEFVVEHHKKGLEGSEFGDFADENSDSCEIESGRWDDFSFRRGFLKDAKADAEKVIEILKQDGP
        M+SLSLVSSRIVCRLFSTSFIV RTI N SF  DDRFEFVVE +KK LEGSEFG F DENSDSCEI S R DD S RRGFL+ AK  AEKVIEILKQDGP
Subjt:  MHSLSLVSSRIVCRLFSTSFIVHRTIWNWSFCSDDRFEFVVEHHKKGLEGSEFGDFADENSDSCEIESGRWDDFSFRRGFLKDAKADAEKVIEILKQDGP

Query:  GFDTFLALDELQLQVSGVLVGEVLKGILKSTSDLNKT--------------SVQNW-GTSFSYG---------PEFKAMWRLLDEMTEKGYPVTARTFMI
        GFDT LALDELQLQVSGVLV EVLKGIL+S + LNKT               V+N+  T+ SY           EFKAMWRLLDEMTEKGYPVTARTFMI
Subjt:  GFDTFLALDELQLQVSGVLVGEVLKGILKSTSDLNKT--------------SVQNW-GTSFSYG---------PEFKAMWRLLDEMTEKGYPVTARTFMI

Query:  LICTCGDAGLARKVVE----------------------------------------------------------RCKLGKLDQFHRLLDGMARNGFSPDF
        LICTCGDAGLARKVVE                                                          RCKLGKLDQFHRLLD MARNGFSPD+
Subjt:  LICTCGDAGLARKVVE----------------------------------------------------------RCKLGKLDQFHRLLDGMARNGFSPDF

Query:  HTYNILLYVLSKGDKPLAALNLLNHMREVGLGPNVLQFMTLINGLSRAGNLD
        HTYNILL+VL KGDKPLAALNLLNHMREVG  P++L F TLI+GLSRAGNLD
Subjt:  HTYNILLYVLSKGDKPLAALNLLNHMREVGLGPNVLQFMTLINGLSRAGNLD

XP_038878012.1 pentatricopeptide repeat-containing protein At3g60050-like [Benincasa hispida]1.1e-11267.05Show/hide
Query:  MHSLSLVSSRIVCRLFSTSFIVHRTIWNWSFCSDDRFEFVVEHHKKGLEGSEFGDFADENSDSCEIESGRWDDFSFRRGFLKDAKADAEKVIEILKQDGP
        M+SLSLVSSRIVCRLF+TSFIV RTIWN +F SDDRFEFVVE HKKG+EGSEFG FADENSDS +IESGR D FS RRGFL+DAK DAEKVIEILKQDGP
Subjt:  MHSLSLVSSRIVCRLFSTSFIVHRTIWNWSFCSDDRFEFVVEHHKKGLEGSEFGDFADENSDSCEIESGRWDDFSFRRGFLKDAKADAEKVIEILKQDGP

Query:  GFDTFLALDELQLQVSGVLVGEVLKGILKSTSDLNKTSVQNWGTSF---------------SYG---------PEFKAMWRLLDEMTEKGYPVTARTFMI
        GFDTFLALDELQLQVSGVLVGEVLKGILKSTS LNKT     G  F               SY           EFKAMWRLLDEMTEKGYPVTARTFMI
Subjt:  GFDTFLALDELQLQVSGVLVGEVLKGILKSTSDLNKTSVQNWGTSF---------------SYG---------PEFKAMWRLLDEMTEKGYPVTARTFMI

Query:  LICTCGDAGLARKVVE----------------------------------------------------------RCKLGKLDQFHRLLDGMARNGFSPDF
        LICTCGDAGLARKVVE                                                          RCKLGKLDQFHRLLD MA NGFSPDF
Subjt:  LICTCGDAGLARKVVE----------------------------------------------------------RCKLGKLDQFHRLLDGMARNGFSPDF

Query:  HTYNILLYVLSKGDKPLAALNLLNHMREVGLGPNVLQFMTLINGLSRAGNLD
        HTYNILLYVL KGDKPLAALNLLNHMREVG  PNV  F TLINGLSRAGNLD
Subjt:  HTYNILLYVLSKGDKPLAALNLLNHMREVGLGPNVLQFMTLINGLSRAGNLD

TrEMBL top hitse value%identityAlignment
A0A0A0L8P4 Uncharacterized protein2.1e-10463.07Show/hide
Query:  MHSLSLVSSRIVCRLFSTSFIVHRTIWNWSFCSDDRFEFVVEHHKKGLEGSEFGDFADENSDSCEIESGRWDDFSFRRGFLKDAKADAEKVIEILKQDGP
        M+SLSLVSSRIVCRLFSTSFIV RTIWN +FCSDDRF+F VE          F   AD NSDS E +S RWDDFSFRR FLKDAK DAEKVIEILKQDGP
Subjt:  MHSLSLVSSRIVCRLFSTSFIVHRTIWNWSFCSDDRFEFVVEHHKKGLEGSEFGDFADENSDSCEIESGRWDDFSFRRGFLKDAKADAEKVIEILKQDGP

Query:  GFDTFLALDELQLQVSGVLVGEVLKGILKSTSDLNKTSVQNWGTSF---------------SYG---------PEFKAMWRLLDEMTEKGYPVTARTFMI
        GFDTFLALDELQL+VSGVLVGEVLKGILKS S LNKT     G  F               SY           EFKAMWR+LDEMTEKGYPVTARTFMI
Subjt:  GFDTFLALDELQLQVSGVLVGEVLKGILKSTSDLNKTSVQNWGTSF---------------SYG---------PEFKAMWRLLDEMTEKGYPVTARTFMI

Query:  LICTCGDAGLARKVVER----------------------------------------------------------CKLGKLDQFHRLLDGMARNGFSPDF
        LICTCG+AGLA++VVER                                                          CKLGKLDQFHRLLD MAR GFSPDF
Subjt:  LICTCGDAGLARKVVER----------------------------------------------------------CKLGKLDQFHRLLDGMARNGFSPDF

Query:  HTYNILLYVLSKGDKPLAALNLLNHMREVGLGPNVLQFMTLINGLSRAGNLD
        HTYNILLYVL KGDKPLAALNLLNHMREVG GPNVL F TLINGLSRAGNLD
Subjt:  HTYNILLYVLSKGDKPLAALNLLNHMREVGLGPNVLQFMTLINGLSRAGNLD

A0A1S3AYB3 pentatricopeptide repeat-containing protein At1g55630-like4.5e-10764.49Show/hide
Query:  MHSLSLVSSRIVCRLFSTSFIVHRTIWNWSFCSDDRFEFVVEHHKKGLEGSEFGDFADENSDSCEIESGRWDDFSFRRGFLKDAKADAEKVIEILKQDGP
        M+SLSLVSSRIVCRLFSTSFIV RTIWN SFCSDDRF+FVVE          F  FAD NSDS E +S RWDDFS RR FLKDAK DAEKVIEILKQDGP
Subjt:  MHSLSLVSSRIVCRLFSTSFIVHRTIWNWSFCSDDRFEFVVEHHKKGLEGSEFGDFADENSDSCEIESGRWDDFSFRRGFLKDAKADAEKVIEILKQDGP

Query:  GFDTFLALDELQLQVSGVLVGEVLKGILKSTSDLNKTSVQNWGTSF---------------SYG---------PEFKAMWRLLDEMTEKGYPVTARTFMI
        GFDTFLALDEL+LQVSGVLVGEVLKGILKSTS LNKT     G  F               SY           EFKAMWRLLDEMTEKGYPVTARTFMI
Subjt:  GFDTFLALDELQLQVSGVLVGEVLKGILKSTSDLNKTSVQNWGTSF---------------SYG---------PEFKAMWRLLDEMTEKGYPVTARTFMI

Query:  LICTCGDAGLARKVVE----------------------------------------------------------RCKLGKLDQFHRLLDGMARNGFSPDF
        LICTCGDAGLA+KVVE                                                          RCKLGKLDQFHRLLD MAR GFSPDF
Subjt:  LICTCGDAGLARKVVE----------------------------------------------------------RCKLGKLDQFHRLLDGMARNGFSPDF

Query:  HTYNILLYVLSKGDKPLAALNLLNHMREVGLGPNVLQFMTLINGLSRAGNLD
        HTYNILLYVL KGDKPLAALNLLNHMREVG GPN+L F TLINGLSRAGNLD
Subjt:  HTYNILLYVLSKGDKPLAALNLLNHMREVGLGPNVLQFMTLINGLSRAGNLD

A0A5D3DH12 Pentatricopeptide repeat-containing protein3.4e-10764.77Show/hide
Query:  MHSLSLVSSRIVCRLFSTSFIVHRTIWNWSFCSDDRFEFVVEHHKKGLEGSEFGDFADENSDSCEIESGRWDDFSFRRGFLKDAKADAEKVIEILKQDGP
        M+SLSLVSSRIVCRLFSTSFIV RTIWN SFCSDDRF+FVVE          F  FAD NSDS E +S RWDDFS RR FLKDAK DAEKVIEILKQDGP
Subjt:  MHSLSLVSSRIVCRLFSTSFIVHRTIWNWSFCSDDRFEFVVEHHKKGLEGSEFGDFADENSDSCEIESGRWDDFSFRRGFLKDAKADAEKVIEILKQDGP

Query:  GFDTFLALDELQLQVSGVLVGEVLKGILKSTSDLNKTSVQNWGTSF---------------SYG---------PEFKAMWRLLDEMTEKGYPVTARTFMI
        GFDTFLALDEL+LQVSGVLVGEVLKGILKSTS LNKT     G  F               SY           EFKAMWRLLDEMTEKGYPVTARTFMI
Subjt:  GFDTFLALDELQLQVSGVLVGEVLKGILKSTSDLNKTSVQNWGTSF---------------SYG---------PEFKAMWRLLDEMTEKGYPVTARTFMI

Query:  LICTCGDAGLARKVVE----------------------------------------------------------RCKLGKLDQFHRLLDGMARNGFSPDF
        LICTCGDAGLA+KVVE                                                          RCKLGKLDQFHRLLD MAR GFSPDF
Subjt:  LICTCGDAGLARKVVE----------------------------------------------------------RCKLGKLDQFHRLLDGMARNGFSPDF

Query:  HTYNILLYVLSKGDKPLAALNLLNHMREVGLGPNVLQFMTLINGLSRAGNLD
        HTYNILLYVL KGDKPLAALNLLNHMREVG GPNVL F TLINGLSRAGNLD
Subjt:  HTYNILLYVLSKGDKPLAALNLLNHMREVGLGPNVLQFMTLINGLSRAGNLD

A0A6J1E6P6 pentatricopeptide repeat-containing protein At1g55630-like1.1e-10262.5Show/hide
Query:  MHSLSLVSSRIVCRLFSTSFIVHRTIWNWSFCSDDRFEFVVEHHKKGLEGSEFGDFADENSDSCEIESGRWDDFSFRRGFLKDAKADAEKVIEILKQDGP
        M+SLSLVSSRIVCRL STSFIV R I N SF  DDRFEFVVE +KK LEGSEFG F DEN DSCEI S R DD S R+ FL++AK DAEKVIEILKQDGP
Subjt:  MHSLSLVSSRIVCRLFSTSFIVHRTIWNWSFCSDDRFEFVVEHHKKGLEGSEFGDFADENSDSCEIESGRWDDFSFRRGFLKDAKADAEKVIEILKQDGP

Query:  GFDTFLALDELQLQVSGVLVGEVLKGILKSTSDLNKTSVQNWG---------------TSFSYG---------PEFKAMWRLLDEMTEKGYPVTARTFMI
        GFDT LALDELQLQVSGVLV EVLKGIL+S + LNKT     G               T+ SY           EFKAMWRLLDEMTEKGYPVTARTFMI
Subjt:  GFDTFLALDELQLQVSGVLVGEVLKGILKSTSDLNKTSVQNWG---------------TSFSYG---------PEFKAMWRLLDEMTEKGYPVTARTFMI

Query:  LICTCGDAGLARKVVE----------------------------------------------------------RCKLGKLDQFHRLLDGMARNGFSPDF
        LICTCGDAGLARKVVE                                                          RCKLGKLDQFHRLLD MARNGFSPD+
Subjt:  LICTCGDAGLARKVVE----------------------------------------------------------RCKLGKLDQFHRLLDGMARNGFSPDF

Query:  HTYNILLYVLSKGDKPLAALNLLNHMREVGLGPNVLQFMTLINGLSRAGNLD
        HTYNILL+VL KGDKPLAALNLLNHMREVG  P++L F TLI+GLSRAGNLD
Subjt:  HTYNILLYVLSKGDKPLAALNLLNHMREVGLGPNVLQFMTLINGLSRAGNLD

A0A6J1JDA6 pentatricopeptide repeat-containing protein At1g55630-like1.6e-10162.5Show/hide
Query:  MHSLSLVSSRIVCRLFSTSFIVHRTIWNWSFCSDDRFEFVVEHHKKGLEGSEFGDFADENSDSCEIESGRWDDFSFRRGFLKDAKADAEKVIEILKQDGP
        M+SLSLVSSRIVCRL   SFIV R I N SF  DDRFEFVVE +KK LEGSEFG F DENSDSCEI S R DD S RRGF + AK DAEKVIEILKQDGP
Subjt:  MHSLSLVSSRIVCRLFSTSFIVHRTIWNWSFCSDDRFEFVVEHHKKGLEGSEFGDFADENSDSCEIESGRWDDFSFRRGFLKDAKADAEKVIEILKQDGP

Query:  GFDTFLALDELQLQVSGVLVGEVLKGILKSTSDLNKTSVQNWG---------------TSFSYG---------PEFKAMWRLLDEMTEKGYPVTARTFMI
        GFDT LALDELQLQVSGVLV EVLKGIL+S + LNKT     G               T+ SY           EFKAMWRLLDEMTEKGYPVTARTFMI
Subjt:  GFDTFLALDELQLQVSGVLVGEVLKGILKSTSDLNKTSVQNWG---------------TSFSYG---------PEFKAMWRLLDEMTEKGYPVTARTFMI

Query:  LICTCGDAGLARKVVE----------------------------------------------------------RCKLGKLDQFHRLLDGMARNGFSPDF
        LICTCGDAGLARKVVE                                                          RCKLGKLDQFHRLLD MARNGFSPD 
Subjt:  LICTCGDAGLARKVVE----------------------------------------------------------RCKLGKLDQFHRLLDGMARNGFSPDF

Query:  HTYNILLYVLSKGDKPLAALNLLNHMREVGLGPNVLQFMTLINGLSRAGNLD
        HTYNILL+VL KGDKPLAALNLLNHMREVG  P++L F TLI+GLSRAGNLD
Subjt:  HTYNILLYVLSKGDKPLAALNLLNHMREVGLGPNVLQFMTLINGLSRAGNLD

SwissProt top hitse value%identityAlignment
O04491 Putative pentatricopeptide repeat-containing protein At1g096804.2e-0931.65Show/hide
Query:  MWRLLDEMTEKGYPVTARTFMILI---CTCGDAGLARKVVER--------------------CKLGKLDQFHRLLDGMARNGFSPDFHTYNILLYVLSKG
        +W    E+ + G+P+    F IL+   C  G+   A+KV +                     CK+G LD+  RL   M ++   PD  TY+ L+  L K 
Subjt:  MWRLLDEMTEKGYPVTARTFMILI---CTCGDAGLARKVVER--------------------CKLGKLDQFHRLLDGMARNGFSPDFHTYNILLYVLSKG

Query:  DKPLAALNLLNHMREVGLGPNVLQFMTLINGLSRAGNLD
        +K   A  L + M + GL PN + F TLI+G SR G +D
Subjt:  DKPLAALNLLNHMREVGLGPNVLQFMTLINGLSRAGNLD

Q3EDF8 Pentatricopeptide repeat-containing protein At1g099005.4e-0930.94Show/hide
Query:  RLLDEMTEKGYPVTARTFMILI---CTCGDAGLARKVVER--------------------CKLGKLDQFHRLLDGMARNGFSPDFHTYNILLYVLSKGDK
        +LL +M  KG+  +  TF ILI   C  G  G A  ++E+                    CK  K+D+    L+ M   G  PD  TYN +L  L K  K
Subjt:  RLLDEMTEKGYPVTARTFMILI---CTCGDAGLARKVVER--------------------CKLGKLDQFHRLLDGMARNGFSPDFHTYNILLYVLSKGDK

Query:  PLAALNLLNHMREVGLGPNVLQFMTLINGLSRAGNLDDA
           A+ +LN +   G  P ++ + T+I+GL++AG    A
Subjt:  PLAALNLLNHMREVGLGPNVLQFMTLINGLSRAGNLDDA

Q76C99 Protein Rf1, mitochondrial5.4e-0931.36Show/hide
Query:  RLLDEMTEKGYPVTARTFMILICTCGDAGLARKVVERCKLGKLDQFHRLLDGMARNGFSPDFHTYNILLYVLSKGDKPLAALNLLNHMREVGLGPNVLQF
        ++ D MT++G      T+  L+      G A K       G L + H LLD M RNG  PD + ++IL+   +K  K   A+ + + MR+ GL PN + +
Subjt:  RLLDEMTEKGYPVTARTFMILICTCGDAGLARKVVERCKLGKLDQFHRLLDGMARNGFSPDFHTYNILLYVLSKGDKPLAALNLLNHMREVGLGPNVLQF

Query:  MTLINGLSRAGNLDDARM
          +I  L ++G ++DA +
Subjt:  MTLINGLSRAGNLDDARM

Q7X6A5 Pentatricopeptide repeat-containing protein At1g556305.5e-4637.5Show/hide
Query:  MHSLSLVSSRIVCRLFSTSFIVHRTIWNWSFCSDDRFEFVVEHHKKGLEGSEFGDFADENSDSCEIESGRWDDFSFRRGFLKDAKADAEKVIEILKQDGP
        M+S+   S+ +  R  S      R   N S   D       E  K   E SE     D+       E+G  +  S R+ F++  K  A +V++ L+QD P
Subjt:  MHSLSLVSSRIVCRLFSTSFIVHRTIWNWSFCSDDRFEFVVEHHKKGLEGSEFGDFADENSDSCEIESGRWDDFSFRRGFLKDAKADAEKVIEILKQDGP

Query:  GFDTFLALDELQLQVSGVLVGEVLKGILKSTSDLNKT--------------SVQNWGTS----------FSYGPEFKAMWRLLDEMTEKGYPVTARTFMI
        GF+T  ALDEL + +SG+LV EVL GIL++ S  NKT                +N+  +          F+   E+KAM RL+DEM + GYP TA TF +
Subjt:  GFDTFLALDELQLQVSGVLVGEVLKGILKSTSDLNKT--------------SVQNWGTS----------FSYGPEFKAMWRLLDEMTEKGYPVTARTFMI

Query:  LICTCGDAGLARKVVER----------------------------------------------------------CKLGKLDQFHRLLDGMARNGFSPDF
        LICTCG+AGLAR VVE+                                                           +LGK D+ +RLLD M ++GFSPD 
Subjt:  LICTCGDAGLARKVVER----------------------------------------------------------CKLGKLDQFHRLLDGMARNGFSPDF

Query:  HTYNILLYVLSKGDKPLAALNLLNHMREVGLGPNVLQFMTLINGLSRAGNLD
        +TYNILL+ L+ G+KPLAALNLLNHMREVG+ P V+ F TLI+GLSRAG L+
Subjt:  HTYNILLYVLSKGDKPLAALNLLNHMREVGLGPNVLQFMTLINGLSRAGNLD

Q9M1D8 Pentatricopeptide repeat-containing protein At3g600501.2e-4538.98Show/hide
Query:  DENSDSCEIESGRWDDFSFRRGFLKDAKADAEKVIEILKQDGPGFDTFLALDELQLQVSGVLVGEVLKGILKSTSDLNKTSVQN-------WGTS-----
        DE+S+  E+ S   +  S R  FL+ A   A +V+  L+ D  GF++   LDEL ++VSG+LV EVL GIL++ S  NK            W        
Subjt:  DENSDSCEIESGRWDDFSFRRGFLKDAKADAEKVIEILKQDGPGFDTFLALDELQLQVSGVLVGEVLKGILKSTSDLNKTSVQN-------WGTS-----

Query:  ------------FSYGPEFKAMWRLLDEMTEKGYPVTARTFMILICTCGDAGLARKVV------------------------------------------
                    F+   E+KAMWRL+DEM + G+P TARTF +LIC+CG+AGLA++ V                                          
Subjt:  ------------FSYGPEFKAMWRLLDEMTEKGYPVTARTFMILICTCGDAGLARKVV------------------------------------------

Query:  ----------------ERCKLGKLDQFHRLLDGMARNGFSPDFHTYNILLYVLSKGDKPLAALNLLNHMREVGLGPNVLQFMTLINGLSRAGNLD
                           +LGK+D+F RL D MAR+GFSPD +TYNILL++L KG+KPLAAL  LNHM+EVG+ P+VL + TLI+GLSRAGNL+
Subjt:  ----------------ERCKLGKLDQFHRLLDGMARNGFSPDFHTYNILLYVLSKGDKPLAALNLLNHMREVGLGPNVLQFMTLINGLSRAGNLD

Arabidopsis top hitse value%identityAlignment
AT1G09680.1 Pentatricopeptide repeat (PPR) superfamily protein3.0e-1031.65Show/hide
Query:  MWRLLDEMTEKGYPVTARTFMILI---CTCGDAGLARKVVER--------------------CKLGKLDQFHRLLDGMARNGFSPDFHTYNILLYVLSKG
        +W    E+ + G+P+    F IL+   C  G+   A+KV +                     CK+G LD+  RL   M ++   PD  TY+ L+  L K 
Subjt:  MWRLLDEMTEKGYPVTARTFMILI---CTCGDAGLARKVVER--------------------CKLGKLDQFHRLLDGMARNGFSPDFHTYNILLYVLSKG

Query:  DKPLAALNLLNHMREVGLGPNVLQFMTLINGLSRAGNLD
        +K   A  L + M + GL PN + F TLI+G SR G +D
Subjt:  DKPLAALNLLNHMREVGLGPNVLQFMTLINGLSRAGNLD

AT1G09900.1 Pentatricopeptide repeat (PPR-like) superfamily protein3.9e-1030.94Show/hide
Query:  RLLDEMTEKGYPVTARTFMILI---CTCGDAGLARKVVER--------------------CKLGKLDQFHRLLDGMARNGFSPDFHTYNILLYVLSKGDK
        +LL +M  KG+  +  TF ILI   C  G  G A  ++E+                    CK  K+D+    L+ M   G  PD  TYN +L  L K  K
Subjt:  RLLDEMTEKGYPVTARTFMILI---CTCGDAGLARKVVER--------------------CKLGKLDQFHRLLDGMARNGFSPDFHTYNILLYVLSKGDK

Query:  PLAALNLLNHMREVGLGPNVLQFMTLINGLSRAGNLDDA
           A+ +LN +   G  P ++ + T+I+GL++AG    A
Subjt:  PLAALNLLNHMREVGLGPNVLQFMTLINGLSRAGNLDDA

AT1G55630.1 Pentatricopeptide repeat (PPR) superfamily protein3.9e-4737.5Show/hide
Query:  MHSLSLVSSRIVCRLFSTSFIVHRTIWNWSFCSDDRFEFVVEHHKKGLEGSEFGDFADENSDSCEIESGRWDDFSFRRGFLKDAKADAEKVIEILKQDGP
        M+S+   S+ +  R  S      R   N S   D       E  K   E SE     D+       E+G  +  S R+ F++  K  A +V++ L+QD P
Subjt:  MHSLSLVSSRIVCRLFSTSFIVHRTIWNWSFCSDDRFEFVVEHHKKGLEGSEFGDFADENSDSCEIESGRWDDFSFRRGFLKDAKADAEKVIEILKQDGP

Query:  GFDTFLALDELQLQVSGVLVGEVLKGILKSTSDLNKT--------------SVQNWGTS----------FSYGPEFKAMWRLLDEMTEKGYPVTARTFMI
        GF+T  ALDEL + +SG+LV EVL GIL++ S  NKT                +N+  +          F+   E+KAM RL+DEM + GYP TA TF +
Subjt:  GFDTFLALDELQLQVSGVLVGEVLKGILKSTSDLNKT--------------SVQNWGTS----------FSYGPEFKAMWRLLDEMTEKGYPVTARTFMI

Query:  LICTCGDAGLARKVVER----------------------------------------------------------CKLGKLDQFHRLLDGMARNGFSPDF
        LICTCG+AGLAR VVE+                                                           +LGK D+ +RLLD M ++GFSPD 
Subjt:  LICTCGDAGLARKVVER----------------------------------------------------------CKLGKLDQFHRLLDGMARNGFSPDF

Query:  HTYNILLYVLSKGDKPLAALNLLNHMREVGLGPNVLQFMTLINGLSRAGNLD
        +TYNILL+ L+ G+KPLAALNLLNHMREVG+ P V+ F TLI+GLSRAG L+
Subjt:  HTYNILLYVLSKGDKPLAALNLLNHMREVGLGPNVLQFMTLINGLSRAGNLD

AT3G60040.1 F-box family protein1.7e-1058.82Show/hide
Query:  ILLYVLSKGDKPLAALNLLNHMREVGLGPNVLQFMTLINGLSRAGNLDDAR
        ILL++L KG+KPLAAL  LNHM+EVG+ P+VL + TLI+G   +G LD A+
Subjt:  ILLYVLSKGDKPLAALNLLNHMREVGLGPNVLQFMTLINGLSRAGNLDDAR

AT3G60050.1 Pentatricopeptide repeat (PPR) superfamily protein8.8e-4738.98Show/hide
Query:  DENSDSCEIESGRWDDFSFRRGFLKDAKADAEKVIEILKQDGPGFDTFLALDELQLQVSGVLVGEVLKGILKSTSDLNKTSVQN-------WGTS-----
        DE+S+  E+ S   +  S R  FL+ A   A +V+  L+ D  GF++   LDEL ++VSG+LV EVL GIL++ S  NK            W        
Subjt:  DENSDSCEIESGRWDDFSFRRGFLKDAKADAEKVIEILKQDGPGFDTFLALDELQLQVSGVLVGEVLKGILKSTSDLNKTSVQN-------WGTS-----

Query:  ------------FSYGPEFKAMWRLLDEMTEKGYPVTARTFMILICTCGDAGLARKVV------------------------------------------
                    F+   E+KAMWRL+DEM + G+P TARTF +LIC+CG+AGLA++ V                                          
Subjt:  ------------FSYGPEFKAMWRLLDEMTEKGYPVTARTFMILICTCGDAGLARKVV------------------------------------------

Query:  ----------------ERCKLGKLDQFHRLLDGMARNGFSPDFHTYNILLYVLSKGDKPLAALNLLNHMREVGLGPNVLQFMTLINGLSRAGNLD
                           +LGK+D+F RL D MAR+GFSPD +TYNILL++L KG+KPLAAL  LNHM+EVG+ P+VL + TLI+GLSRAGNL+
Subjt:  ----------------ERCKLGKLDQFHRLLDGMARNGFSPDFHTYNILLYVLSKGDKPLAALNLLNHMREVGLGPNVLQFMTLINGLSRAGNLD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCACTCTTTATCGCTTGTGAGTTCGCGGATAGTCTGCAGATTATTTTCAACTTCTTTTATTGTGCATCGAACAATTTGGAATTGGAGCTTTTGTAGTGATGATCGATT
TGAGTTTGTTGTGGAACACCATAAGAAGGGGTTGGAGGGATCAGAGTTTGGTGACTTTGCTGATGAAAATTCAGATTCTTGTGAGATTGAGAGTGGTAGATGGGATGATT
TTTCATTTAGAAGGGGTTTTCTAAAGGATGCGAAAGCTGATGCTGAAAAAGTTATTGAGATTCTCAAACAGGATGGTCCTGGATTTGACACATTTTTGGCTTTGGATGAA
CTGCAACTACAGGTCTCAGGGGTACTTGTTGGGGAAGTTTTGAAGGGTATTTTGAAAAGCACAAGTGATCTAAACAAAACTAGTGTGCAAAATTGGGGTACAAGTTTTTC
GTATGGTCCGGAGTTCAAGGCTATGTGGAGGTTACTTGATGAGATGACTGAGAAAGGGTATCCCGTCACTGCAAGGACATTTATGATATTGATATGTACTTGTGGTGATG
CAGGCTTGGCTAGGAAAGTTGTTGAGAGGTGCAAATTGGGGAAATTGGATCAGTTTCACAGATTGCTTGATGGAATGGCCAGGAATGGGTTTTCCCCTGATTTCCATACT
TATAACATTCTTCTTTACGTTCTTAGCAAAGGAGACAAACCCCTTGCTGCTCTAAATCTTTTGAACCACATGAGGGAAGTGGGCCTTGGTCCGAACGTTCTTCAATTCAT
GACGCTTATAAATGGGCTTAGTCGGGCTGGAAATTTGGATGATGCAAGGATGTAG
mRNA sequenceShow/hide mRNA sequence
ATGCACTCTTTATCGCTTGTGAGTTCGCGGATAGTCTGCAGATTATTTTCAACTTCTTTTATTGTGCATCGAACAATTTGGAATTGGAGCTTTTGTAGTGATGATCGATT
TGAGTTTGTTGTGGAACACCATAAGAAGGGGTTGGAGGGATCAGAGTTTGGTGACTTTGCTGATGAAAATTCAGATTCTTGTGAGATTGAGAGTGGTAGATGGGATGATT
TTTCATTTAGAAGGGGTTTTCTAAAGGATGCGAAAGCTGATGCTGAAAAAGTTATTGAGATTCTCAAACAGGATGGTCCTGGATTTGACACATTTTTGGCTTTGGATGAA
CTGCAACTACAGGTCTCAGGGGTACTTGTTGGGGAAGTTTTGAAGGGTATTTTGAAAAGCACAAGTGATCTAAACAAAACTAGTGTGCAAAATTGGGGTACAAGTTTTTC
GTATGGTCCGGAGTTCAAGGCTATGTGGAGGTTACTTGATGAGATGACTGAGAAAGGGTATCCCGTCACTGCAAGGACATTTATGATATTGATATGTACTTGTGGTGATG
CAGGCTTGGCTAGGAAAGTTGTTGAGAGGTGCAAATTGGGGAAATTGGATCAGTTTCACAGATTGCTTGATGGAATGGCCAGGAATGGGTTTTCCCCTGATTTCCATACT
TATAACATTCTTCTTTACGTTCTTAGCAAAGGAGACAAACCCCTTGCTGCTCTAAATCTTTTGAACCACATGAGGGAAGTGGGCCTTGGTCCGAACGTTCTTCAATTCAT
GACGCTTATAAATGGGCTTAGTCGGGCTGGAAATTTGGATGATGCAAGGATGTAG
Protein sequenceShow/hide protein sequence
MHSLSLVSSRIVCRLFSTSFIVHRTIWNWSFCSDDRFEFVVEHHKKGLEGSEFGDFADENSDSCEIESGRWDDFSFRRGFLKDAKADAEKVIEILKQDGPGFDTFLALDE
LQLQVSGVLVGEVLKGILKSTSDLNKTSVQNWGTSFSYGPEFKAMWRLLDEMTEKGYPVTARTFMILICTCGDAGLARKVVERCKLGKLDQFHRLLDGMARNGFSPDFHT
YNILLYVLSKGDKPLAALNLLNHMREVGLGPNVLQFMTLINGLSRAGNLDDARM