CuGenDBv2

Gene ID	HG10006011
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	RBR-type E3 ubiquitin transferase
Genome location	Chr07:11327842..11329035
RNA-Seq Expression	HG10006011
Synteny	HG10006011
Gene Ontology terms	GO:0000209 - protein polyubiquitination (biological process) GO:0032436 - positive regulation of proteasomal ubiquitin-dependent protein catabolic process (biological process) GO:0000151 - ubiquitin ligase complex (cellular component) GO:0005737 - cytoplasm (cellular component) GO:0031624 - ubiquitin conjugating enzyme binding (molecular function) GO:0046872 - metal ion binding (molecular function) GO:0061630 - ubiquitin protein ligase activity (molecular function)
InterPro domains	IPR001876 - Zinc finger, RanBP2-type IPR031127 - E3 ubiquitin ligase RBR family IPR036443 - Zinc finger, RanBP2-type superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

TYK23880.1 putative E3 ubiquitin-protein ligase ARI8 isoform X1 [Cucumis melo var. makuwa]

1.8e-87

96.99

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Query:  KIVECRRVLKWTYAYGYYLPEREHAKRQFFEYLQGEAESGLERLHQCAEKELHAYLNAADGPSKDFNEFRTKLAGLTSVTRNYFENLVRSLENGLSDVDS
        +IVECRRVLKWTYAYGYYLPEREHAKRQFFEYLQGEAESGLERLHQCAEKELHAYLNAADGPSKDFNEFRTKLAGLTSVTRNYFENLVR+LENGLSDVDS
Subjt:  KIVECRRVLKWTYAYGYYLPEREHAKRQFFEYLQGEAESGLERLHQCAEKELHAYLNAADGPSKDFNEFRTKLAGLTSVTRNYFENLVRSLENGLSDVDS

Query:  HGTCSKTASSKSTGGCRSKGGKGKMSAFRASGSSRNIDDSDHWSCEHCTFANVKSATFCQMCQQRR
        HGTCSKTASSKSTGGCRSKGGKGKMSAFR SGSSRNIDD+DHWSCEHCTFAN+KSATFCQMCQQRR
Subjt:  HGTCSKTASSKSTGGCRSKGGKGKMSAFRASGSSRNIDDSDHWSCEHCTFANVKSATFCQMCQQRR

XP_004138892.1 probable E3 ubiquitin-protein ligase ARI8 isoform X2 [Cucumis sativus]

3.5e-86

96.39

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Query:  KIVECRRVLKWTYAYGYYLPEREHAKRQFFEYLQGEAESGLERLHQCAEKELHAYLNAADGPSKDFNEFRTKLAGLTSVTRNYFENLVRSLENGLSDVDS
        +IVECRRVLKWTYAYGYYLPEREHAKRQFFEYLQGEAESGLERLHQCAEKELHAYLNAADGPSKDFNEFRTKLAGLTSVTRNYFENLVR+LENGLSDVDS
Subjt:  KIVECRRVLKWTYAYGYYLPEREHAKRQFFEYLQGEAESGLERLHQCAEKELHAYLNAADGPSKDFNEFRTKLAGLTSVTRNYFENLVRSLENGLSDVDS

Query:  HGTCSKTASSKSTGGCRSKGGKGKMSAFRASGSSRNIDDSDHWSCEHCTFANVKSATFCQMCQQRR
         GTCSKT+SSKSTGGCRSKGGKGKMSAFR SGSSRNIDD+DHWSCEHCTFANVKSATFCQMCQQRR
Subjt:  HGTCSKTASSKSTGGCRSKGGKGKMSAFRASGSSRNIDDSDHWSCEHCTFANVKSATFCQMCQQRR

XP_008441769.1 PREDICTED: probable E3 ubiquitin-protein ligase ARI8 isoform X1 [Cucumis melo]

1.8e-87

96.99

Show/hide

Query:  KIVECRRVLKWTYAYGYYLPEREHAKRQFFEYLQGEAESGLERLHQCAEKELHAYLNAADGPSKDFNEFRTKLAGLTSVTRNYFENLVRSLENGLSDVDS
        +IVECRRVLKWTYAYGYYLPEREHAKRQFFEYLQGEAESGLERLHQCAEKELHAYLNAADGPSKDFNEFRTKLAGLTSVTRNYFENLVR+LENGLSDVDS
Subjt:  KIVECRRVLKWTYAYGYYLPEREHAKRQFFEYLQGEAESGLERLHQCAEKELHAYLNAADGPSKDFNEFRTKLAGLTSVTRNYFENLVRSLENGLSDVDS

Query:  HGTCSKTASSKSTGGCRSKGGKGKMSAFRASGSSRNIDDSDHWSCEHCTFANVKSATFCQMCQQRR
        HGTCSKTASSKSTGGCRSKGGKGKMSAFR SGSSRNIDD+DHWSCEHCTFAN+KSATFCQMCQQRR
Subjt:  HGTCSKTASSKSTGGCRSKGGKGKMSAFRASGSSRNIDDSDHWSCEHCTFANVKSATFCQMCQQRR

XP_022144490.1 probable E3 ubiquitin-protein ligase ARI8 [Momordica charantia]

6.1e-83

93.98

Show/hide

Query:  KIVECRRVLKWTYAYGYYLPEREHAKRQFFEYLQGEAESGLERLHQCAEKELHAYLNAADGPSKDFNEFRTKLAGLTSVTRNYFENLVRSLENGLSDVDS
        +IVECRRVLKWTYAYGYYLPEREHAKRQFFEYLQGEAESGLERLHQCAEKEL  YLN ADGPSKDFNEFRTKLAGLTSVTRNYFENLVR+LENGL+DVDS
Subjt:  KIVECRRVLKWTYAYGYYLPEREHAKRQFFEYLQGEAESGLERLHQCAEKELHAYLNAADGPSKDFNEFRTKLAGLTSVTRNYFENLVRSLENGLSDVDS

Query:  HGTCSKTASSKSTGGCRSKGGKGKMSAFRASGSSRNIDDSDHWSCEHCTFANVKSATFCQMCQQRR
        HGTCS+TASSKSTG CRSKGGKGKMSAFRASGSSRNIDD+DHWSCEHCTFANVKSAT CQMCQQRR
Subjt:  HGTCSKTASSKSTGGCRSKGGKGKMSAFRASGSSRNIDDSDHWSCEHCTFANVKSATFCQMCQQRR

XP_031736773.1 probable E3 ubiquitin-protein ligase ARI8 isoform X1 [Cucumis sativus]

3.5e-86

96.39

Show/hide

Query:  KIVECRRVLKWTYAYGYYLPEREHAKRQFFEYLQGEAESGLERLHQCAEKELHAYLNAADGPSKDFNEFRTKLAGLTSVTRNYFENLVRSLENGLSDVDS
        +IVECRRVLKWTYAYGYYLPEREHAKRQFFEYLQGEAESGLERLHQCAEKELHAYLNAADGPSKDFNEFRTKLAGLTSVTRNYFENLVR+LENGLSDVDS
Subjt:  KIVECRRVLKWTYAYGYYLPEREHAKRQFFEYLQGEAESGLERLHQCAEKELHAYLNAADGPSKDFNEFRTKLAGLTSVTRNYFENLVRSLENGLSDVDS

Query:  HGTCSKTASSKSTGGCRSKGGKGKMSAFRASGSSRNIDDSDHWSCEHCTFANVKSATFCQMCQQRR
         GTCSKT+SSKSTGGCRSKGGKGKMSAFR SGSSRNIDD+DHWSCEHCTFANVKSATFCQMCQQRR
Subjt:  HGTCSKTASSKSTGGCRSKGGKGKMSAFRASGSSRNIDDSDHWSCEHCTFANVKSATFCQMCQQRR

TrEMBL top hits

e value

%identity

Alignment

A0A1S3B4U8 RBR-type E3 ubiquitin transferase

8.9e-88

96.99

Show/hide

Query:  KIVECRRVLKWTYAYGYYLPEREHAKRQFFEYLQGEAESGLERLHQCAEKELHAYLNAADGPSKDFNEFRTKLAGLTSVTRNYFENLVRSLENGLSDVDS
        +IVECRRVLKWTYAYGYYLPEREHAKRQFFEYLQGEAESGLERLHQCAEKELHAYLNAADGPSKDFNEFRTKLAGLTSVTRNYFENLVR+LENGLSDVDS
Subjt:  KIVECRRVLKWTYAYGYYLPEREHAKRQFFEYLQGEAESGLERLHQCAEKELHAYLNAADGPSKDFNEFRTKLAGLTSVTRNYFENLVRSLENGLSDVDS

Query:  HGTCSKTASSKSTGGCRSKGGKGKMSAFRASGSSRNIDDSDHWSCEHCTFANVKSATFCQMCQQRR
        HGTCSKTASSKSTGGCRSKGGKGKMSAFR SGSSRNIDD+DHWSCEHCTFAN+KSATFCQMCQQRR
Subjt:  HGTCSKTASSKSTGGCRSKGGKGKMSAFRASGSSRNIDDSDHWSCEHCTFANVKSATFCQMCQQRR

A0A5D3DKE3 Putative E3 ubiquitin-protein ligase ARI8 isoform X1

8.9e-88

96.99

Show/hide

Query:  KIVECRRVLKWTYAYGYYLPEREHAKRQFFEYLQGEAESGLERLHQCAEKELHAYLNAADGPSKDFNEFRTKLAGLTSVTRNYFENLVRSLENGLSDVDS
        +IVECRRVLKWTYAYGYYLPEREHAKRQFFEYLQGEAESGLERLHQCAEKELHAYLNAADGPSKDFNEFRTKLAGLTSVTRNYFENLVR+LENGLSDVDS
Subjt:  KIVECRRVLKWTYAYGYYLPEREHAKRQFFEYLQGEAESGLERLHQCAEKELHAYLNAADGPSKDFNEFRTKLAGLTSVTRNYFENLVRSLENGLSDVDS

Query:  HGTCSKTASSKSTGGCRSKGGKGKMSAFRASGSSRNIDDSDHWSCEHCTFANVKSATFCQMCQQRR
        HGTCSKTASSKSTGGCRSKGGKGKMSAFR SGSSRNIDD+DHWSCEHCTFAN+KSATFCQMCQQRR
Subjt:  HGTCSKTASSKSTGGCRSKGGKGKMSAFRASGSSRNIDDSDHWSCEHCTFANVKSATFCQMCQQRR

A0A6J1CRR9 RBR-type E3 ubiquitin transferase

3.0e-83

93.98

Show/hide

Query:  KIVECRRVLKWTYAYGYYLPEREHAKRQFFEYLQGEAESGLERLHQCAEKELHAYLNAADGPSKDFNEFRTKLAGLTSVTRNYFENLVRSLENGLSDVDS
        +IVECRRVLKWTYAYGYYLPEREHAKRQFFEYLQGEAESGLERLHQCAEKEL  YLN ADGPSKDFNEFRTKLAGLTSVTRNYFENLVR+LENGL+DVDS
Subjt:  KIVECRRVLKWTYAYGYYLPEREHAKRQFFEYLQGEAESGLERLHQCAEKELHAYLNAADGPSKDFNEFRTKLAGLTSVTRNYFENLVRSLENGLSDVDS

Query:  HGTCSKTASSKSTGGCRSKGGKGKMSAFRASGSSRNIDDSDHWSCEHCTFANVKSATFCQMCQQRR
        HGTCS+TASSKSTG CRSKGGKGKMSAFRASGSSRNIDD+DHWSCEHCTFANVKSAT CQMCQQRR
Subjt:  HGTCSKTASSKSTGGCRSKGGKGKMSAFRASGSSRNIDDSDHWSCEHCTFANVKSATFCQMCQQRR

A0A6J1FIK3 RBR-type E3 ubiquitin transferase

4.9e-78

89.76

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Query:  KIVECRRVLKWTYAYGYYLPEREHAKRQFFEYLQGEAESGLERLHQCAEKELHAYLNAADGPSKDFNEFRTKLAGLTSVTRNYFENLVRSLENGLSDVDS
        +IVECRRVLKWTYAYGYYLPEREHAKR FFEYLQGEAESGLERLHQCAEKEL AY+  ADGPS++FNEFRTKLAGLTSVTRNYFENLVR+LENGLSDVDS
Subjt:  KIVECRRVLKWTYAYGYYLPEREHAKRQFFEYLQGEAESGLERLHQCAEKELHAYLNAADGPSKDFNEFRTKLAGLTSVTRNYFENLVRSLENGLSDVDS

Query:  HGTCSKTASSKSTGGCRSKGGKGKMSAFRASGSSRNIDDSDHWSCEHCTFANVKSATFCQMCQQRR
         GTCS+TASSKS GG RSKGGKGKMSAFRASGSSR IDD+DHWSCEHCTFANVKS T CQMCQQRR
Subjt:  HGTCSKTASSKSTGGCRSKGGKGKMSAFRASGSSRNIDDSDHWSCEHCTFANVKSATFCQMCQQRR

A0A6J1HPL6 RBR-type E3 ubiquitin transferase

8.4e-78

89.76

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Query:  KIVECRRVLKWTYAYGYYLPEREHAKRQFFEYLQGEAESGLERLHQCAEKELHAYLNAADGPSKDFNEFRTKLAGLTSVTRNYFENLVRSLENGLSDVDS
        +IVECRRVLKWTYAYGYYLPEREHAKR FFEYLQGEAESGLERLHQCAEKEL AY+  ADGPS++FNEFRTKLAGLTSVTRNYFENLVR+LENGLSDVDS
Subjt:  KIVECRRVLKWTYAYGYYLPEREHAKRQFFEYLQGEAESGLERLHQCAEKELHAYLNAADGPSKDFNEFRTKLAGLTSVTRNYFENLVRSLENGLSDVDS

Query:  HGTCSKTASSKSTGGCRSKGGKGKMSAFRASGSSRNIDDSDHWSCEHCTFANVKSATFCQMCQQRR
         GTCS+TASSKS GG RSKGGKGKMSAFRASGSSR IDD+DHWSCEHCTFANVKS T CQMCQQRR
Subjt:  HGTCSKTASSKSTGGCRSKGGKGKMSAFRASGSSRNIDDSDHWSCEHCTFANVKSATFCQMCQQRR

SwissProt top hits

e value

%identity

Alignment

P0C8K8 Putative E3 ubiquitin-protein ligase ARI6

2.1e-38

58.96

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Query:  KIVECRRVLKWTYAYGYYLPEREHAKRQFFEYLQGEAESGLERLHQCAEKELHAYLNAADGPSKDFNEFRTKLAGLTSVTRNYFENLVRSLENGLSDVDS
        +I+ECRRVLKWTYAYGYY+P+ +H K+QFFEYLQGEAESGLERLH+C E ++  +    +GPS++FN FRTKL  LTS+T+ +F+NLV++LENGL+DVDS
Subjt:  KIVECRRVLKWTYAYGYYLPEREHAKRQFFEYLQGEAESGLERLHQCAEKELHAYLNAADGPSKDFNEFRTKLAGLTSVTRNYFENLVRSLENGLSDVDS

Query:  HGTCSKTASSKSTGGCRSKGGKGKMSAFRASGSS
        H   SK A+ K +   +  GGKGK  A   +GS+
Subjt:  HGTCSKTASSKSTGGCRSKGGKGKMSAFRASGSS

Q84RR0 Probable E3 ubiquitin-protein ligase ARI7

3.8e-51

75.89

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Query:  KIVECRRVLKWTYAYGYYLPEREHAKRQFFEYLQGEAESGLERLHQCAEKELHAYLNAADGPSKDFNEFRTKLAGLTSVTRNYFENLVRSLENGLSDVDS
        +I+ECRRVLKWTYAYGYYLPE EHAKRQFFEYLQGEAESGLERLHQC EK+L  +L  A+GPSKDFN+FRTKLAGLTSVT+NYFENLV++LENGL+DVDS
Subjt:  KIVECRRVLKWTYAYGYYLPEREHAKRQFFEYLQGEAESGLERLHQCAEKELHAYLNAADGPSKDFNEFRTKLAGLTSVTRNYFENLVRSLENGLSDVDS

Query:  HGTC-SKTASSKSTGGCRSKGGKGKMSAFRASGSSRNIDDS
        H  C SK+ SSKSTG      GKGK S+ R  GSSRN DD+
Subjt:  HGTC-SKTASSKSTGGCRSKGGKGKMSAFRASGSSRNIDDS

Q8L829 Probable E3 ubiquitin-protein ligase ARI5

1.1e-39

63.04

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Query:  KIVECRRVLKWTYAYGYYLPEREHAKRQFFEYLQGEAESGLERLHQCAEKELHAYLNAADGPSKDFNEFRTKLAGLTSVTRNYFENLVRSLENGLSDVDS
        +I+ECRRVLKWTYAYGYYL  ++HAK+ FFEYLQGEAESGLERLH+C EK++  +   A+GPS++FN FRTKL GLTS+T+ +FENLV++LENGL+DVDS
Subjt:  KIVECRRVLKWTYAYGYYLPEREHAKRQFFEYLQGEAESGLERLHQCAEKELHAYLNAADGPSKDFNEFRTKLAGLTSVTRNYFENLVRSLENGLSDVDS

Query:  HGTCSKTASSKSTGGCRSKGGKGKMSAFRASGSSRNID
            SK A+SK +   +  GGKGK S+ +  GSSRN D
Subjt:  HGTCSKTASSKSTGGCRSKGGKGKMSAFRASGSSRNID

Q8W468 Probable E3 ubiquitin-protein ligase ARI8

2.3e-56

67.47

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Query:  KIVECRRVLKWTYAYGYYLPEREHAKRQFFEYLQGEAESGLERLHQCAEKELHAYLNAADGPSKDFNEFRTKLAGLTSVTRNYFENLVRSLENGLSDVDS
        +IVECRRVLKWTYAYG+Y+P++EH KR FFEYLQGEAESGLERLHQCAEKEL  YL+ A GPS+DFNEFRTKLAGLTSVT+NYFENLVR+LENGLSDV+S
Subjt:  KIVECRRVLKWTYAYGYYLPEREHAKRQFFEYLQGEAESGLERLHQCAEKELHAYLNAADGPSKDFNEFRTKLAGLTSVTRNYFENLVRSLENGLSDVDS

Query:  HGTCSKTASSKSTGGCRSKGGKGKMSAFRASGSSRNIDDSDHWSCEHCTFANVKSATFCQMCQQRR
        H    +T+SSKS GG ++KG   K S+           DS HW CE+CT+ N +S T CQMC+  R
Subjt:  HGTCSKTASSKSTGGCRSKGGKGKMSAFRASGSSRNIDDSDHWSCEHCTFANVKSATFCQMCQQRR

Q9SKC3 Probable E3 ubiquitin-protein ligase ARI9

2.5e-31

62.83

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Query:  KIVECRRVLKWTYAYGYYLPEREHAKRQFFEYLQGEAESGLERLHQCAEKELHAYLNAADGPSKDFNEFRTKLAGLTSVTRNYFENLVRSLENGLSDVDS
        +I+ECRRVLKWTYAYGYYL  ++  KR+FFEYLQGEAESGLERLH CAE EL  +   ++ PS  FN FR KL GLT+VT+ YFENLV++LENGL DV +
Subjt:  KIVECRRVLKWTYAYGYYLPEREHAKRQFFEYLQGEAESGLERLHQCAEKELHAYLNAADGPSKDFNEFRTKLAGLTSVTRNYFENLVRSLENGLSDVDS

Query:  HGTCSKTASSKST
        H        +KST
Subjt:  HGTCSKTASSKST

Arabidopsis top hits

e value

%identity

Alignment

AT1G05890.1 RING/U-box superfamily protein

8.1e-41

63.04

Show/hide

Query:  KIVECRRVLKWTYAYGYYLPEREHAKRQFFEYLQGEAESGLERLHQCAEKELHAYLNAADGPSKDFNEFRTKLAGLTSVTRNYFENLVRSLENGLSDVDS
        +I+ECRRVLKWTYAYGYYL  ++HAK+ FFEYLQGEAESGLERLH+C EK++  +   A+GPS++FN FRTKL GLTS+T+ +FENLV++LENGL+DVDS
Subjt:  KIVECRRVLKWTYAYGYYLPEREHAKRQFFEYLQGEAESGLERLHQCAEKELHAYLNAADGPSKDFNEFRTKLAGLTSVTRNYFENLVRSLENGLSDVDS

Query:  HGTCSKTASSKSTGGCRSKGGKGKMSAFRASGSSRNID
            SK A+SK +   +  GGKGK S+ +  GSSRN D
Subjt:  HGTCSKTASSKSTGGCRSKGGKGKMSAFRASGSSRNID

AT1G05890.2 RING/U-box superfamily protein

8.1e-41

63.04

Show/hide

Query:  KIVECRRVLKWTYAYGYYLPEREHAKRQFFEYLQGEAESGLERLHQCAEKELHAYLNAADGPSKDFNEFRTKLAGLTSVTRNYFENLVRSLENGLSDVDS
        +I+ECRRVLKWTYAYGYYL  ++HAK+ FFEYLQGEAESGLERLH+C EK++  +   A+GPS++FN FRTKL GLTS+T+ +FENLV++LENGL+DVDS
Subjt:  KIVECRRVLKWTYAYGYYLPEREHAKRQFFEYLQGEAESGLERLHQCAEKELHAYLNAADGPSKDFNEFRTKLAGLTSVTRNYFENLVRSLENGLSDVDS

Query:  HGTCSKTASSKSTGGCRSKGGKGKMSAFRASGSSRNID
            SK A+SK +   +  GGKGK S+ +  GSSRN D
Subjt:  HGTCSKTASSKSTGGCRSKGGKGKMSAFRASGSSRNID

AT1G65430.1 IBR domain-containing protein

1.6e-57

67.47

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Query:  KIVECRRVLKWTYAYGYYLPEREHAKRQFFEYLQGEAESGLERLHQCAEKELHAYLNAADGPSKDFNEFRTKLAGLTSVTRNYFENLVRSLENGLSDVDS
        +IVECRRVLKWTYAYG+Y+P++EH KR FFEYLQGEAESGLERLHQCAEKEL  YL+ A GPS+DFNEFRTKLAGLTSVT+NYFENLVR+LENGLSDV+S
Subjt:  KIVECRRVLKWTYAYGYYLPEREHAKRQFFEYLQGEAESGLERLHQCAEKELHAYLNAADGPSKDFNEFRTKLAGLTSVTRNYFENLVRSLENGLSDVDS

Query:  HGTCSKTASSKSTGGCRSKGGKGKMSAFRASGSSRNIDDSDHWSCEHCTFANVKSATFCQMCQQRR
        H    +T+SSKS GG ++KG   K S+           DS HW CE+CT+ N +S T CQMC+  R
Subjt:  HGTCSKTASSKSTGGCRSKGGKGKMSAFRASGSSRNIDDSDHWSCEHCTFANVKSATFCQMCQQRR

AT2G31510.1 IBR domain-containing protein

2.7e-52

75.89

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Query:  KIVECRRVLKWTYAYGYYLPEREHAKRQFFEYLQGEAESGLERLHQCAEKELHAYLNAADGPSKDFNEFRTKLAGLTSVTRNYFENLVRSLENGLSDVDS
        +I+ECRRVLKWTYAYGYYLPE EHAKRQFFEYLQGEAESGLERLHQC EK+L  +L  A+GPSKDFN+FRTKLAGLTSVT+NYFENLV++LENGL+DVDS
Subjt:  KIVECRRVLKWTYAYGYYLPEREHAKRQFFEYLQGEAESGLERLHQCAEKELHAYLNAADGPSKDFNEFRTKLAGLTSVTRNYFENLVRSLENGLSDVDS

Query:  HGTC-SKTASSKSTGGCRSKGGKGKMSAFRASGSSRNIDDS
        H  C SK+ SSKSTG      GKGK S+ R  GSSRN DD+
Subjt:  HGTC-SKTASSKSTGGCRSKGGKGKMSAFRASGSSRNIDDS

AT2G31770.1 RING/U-box superfamily protein

1.8e-32

62.83

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Query:  KIVECRRVLKWTYAYGYYLPEREHAKRQFFEYLQGEAESGLERLHQCAEKELHAYLNAADGPSKDFNEFRTKLAGLTSVTRNYFENLVRSLENGLSDVDS
        +I+ECRRVLKWTYAYGYYL  ++  KR+FFEYLQGEAESGLERLH CAE EL  +   ++ PS  FN FR KL GLT+VT+ YFENLV++LENGL DV +
Subjt:  KIVECRRVLKWTYAYGYYLPEREHAKRQFFEYLQGEAESGLERLHQCAEKELHAYLNAADGPSKDFNEFRTKLAGLTSVTRNYFENLVRSLENGLSDVDS

Query:  HGTCSKTASSKST
        H        +KST
Subjt:  HGTCSKTASSKST

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGAAGATATCCCTGACATAATTCTTGATATTGTAGCTGGAAAGATTGTTGAGTGTAGGCGAGTTCTTAAATGGACTTATGCCTATGGATATTATCTACCTGAGCGTGA
ACATGCCAAGAGACAATTCTTTGAATACTTGCAAGGTGAGGCTGAATCTGGGTTGGAACGACTCCACCAATGTGCAGAAAAGGAGTTGCATGCTTACCTAAATGCTGCCG
ATGGTCCTTCAAAAGATTTTAATGAGTTCCGTACCAAACTTGCTGGACTAACCAGTGTAACTCGGAATTACTTTGAGAATTTAGTACGTTCGCTTGAGAATGGTCTGTCG
GATGTGGATTCCCATGGTACCTGCAGCAAAACAGCAAGCTCAAAGAGTACCGGTGGCTGTAGGAGTAAAGGTGGGAAAGGCAAGATGAGTGCATTCAGAGCTAGCGGTTC
GAGCCGAAACATTGATGATTCTGACCATTGGTCTTGTGAACATTGCACCTTTGCAAATGTTAAGTCAGCTACCTTCTGCCAGATGTGCCAGCAACGGCGATAA

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MEDIPDIILDIVAGKIVECRRVLKWTYAYGYYLPEREHAKRQFFEYLQGEAESGLERLHQCAEKELHAYLNAADGPSKDFNEFRTKLAGLTSVTRNYFENLVRSLENGLS
DVDSHGTCSKTASSKSTGGCRSKGGKGKMSAFRASGSSRNIDDSDHWSCEHCTFANVKSATFCQMCQQRR

HG10006011 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome