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HG10006020 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10006020
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionAcyl-[acyl-carrier-protein] desaturase
Genome locationChr07:11635534..11638079
RNA-Seq ExpressionHG10006020
SyntenyHG10006020
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYK07730.1 stearoyl-(acyl-carrier-protein) 9-desaturase [Cucumis melo var. makuwa]2.8e-0454.24Show/hide
Query:  MALKFNPVVNLPCLNPPSKHQRHRRSPTLLMASTLHSLSKYVLTYLNNYDDLPPKQLQL
        MALK +P V LP  N PS    HRRSPTLLMASTLHSLSK        Y   PP+++ +
Subjt:  MALKFNPVVNLPCLNPPSKHQRHRRSPTLLMASTLHSLSKYVLTYLNNYDDLPPKQLQL

XP_022933162.1 stearoyl-[acyl-carrier-protein] 9-desaturase, chloroplastic-like [Cucurbita moschata]1.2e-0452.54Show/hide
Query:  MALKFNPVVNLPCLNPPSKHQRHRRSPTLLMASTLHSLSKYVLTYLNNYDDLPPKQLQL
        MAL  NP V  P    PS+H R RRSPTLLMASTLHSLSK        Y   PP+++ +
Subjt:  MALKFNPVVNLPCLNPPSKHQRHRRSPTLLMASTLHSLSKYVLTYLNNYDDLPPKQLQL

XP_022996724.1 stearoyl-[acyl-carrier-protein] 9-desaturase, chloroplastic-like [Cucurbita maxima]9.5e-0550.85Show/hide
Query:  MALKFNPVVNLPCLNPPSKHQRHRRSPTLLMASTLHSLSKYVLTYLNNYDDLPPKQLQL
        MAL+ NP V  P    PS+H R RRSPT+LMASTLHSLSK        Y   PP+++ +
Subjt:  MALKFNPVVNLPCLNPPSKHQRHRRSPTLLMASTLHSLSKYVLTYLNNYDDLPPKQLQL

XP_023520913.1 stearoyl-[acyl-carrier-protein] 9-desaturase, chloroplastic-like [Cucurbita pepo subsp. pepo]4.3e-0552.54Show/hide
Query:  MALKFNPVVNLPCLNPPSKHQRHRRSPTLLMASTLHSLSKYVLTYLNNYDDLPPKQLQL
        MAL+ NP V  P    PS+H R RRSPTLLMASTLHSLSK        Y   PP+++ +
Subjt:  MALKFNPVVNLPCLNPPSKHQRHRRSPTLLMASTLHSLSKYVLTYLNNYDDLPPKQLQL

XP_038890737.1 stearoyl-[acyl-carrier-protein] 9-desaturase, chloroplastic-like [Benincasa hispida]1.2e-0473.68Show/hide
Query:  ALKFNPVVNLPCLNPPSKHQRHRRSPTLLMASTLHSLS
        ALK NP +NL   N P  H RHRRSPTLLMASTLHSLS
Subjt:  ALKFNPVVNLPCLNPPSKHQRHRRSPTLLMASTLHSLS

TrEMBL top hitse value%identityAlignment
A0A1S3B4Y7 Acyl-[acyl-carrier-protein] desaturase1.3e-0454.24Show/hide
Query:  MALKFNPVVNLPCLNPPSKHQRHRRSPTLLMASTLHSLSKYVLTYLNNYDDLPPKQLQL
        MALK +P V LP  N PS    HRRSPTLLMASTLHSLSK        Y   PP+++ +
Subjt:  MALKFNPVVNLPCLNPPSKHQRHRRSPTLLMASTLHSLSKYVLTYLNNYDDLPPKQLQL

A0A5A7U7M5 Acyl-[acyl-carrier-protein] desaturase1.3e-0454.24Show/hide
Query:  MALKFNPVVNLPCLNPPSKHQRHRRSPTLLMASTLHSLSKYVLTYLNNYDDLPPKQLQL
        MALK +P V LP  N PS    HRRSPTLLMASTLHSLSK        Y   PP+++ +
Subjt:  MALKFNPVVNLPCLNPPSKHQRHRRSPTLLMASTLHSLSKYVLTYLNNYDDLPPKQLQL

A0A5D3C8R0 Acyl-[acyl-carrier-protein] desaturase1.3e-0454.24Show/hide
Query:  MALKFNPVVNLPCLNPPSKHQRHRRSPTLLMASTLHSLSKYVLTYLNNYDDLPPKQLQL
        MALK +P V LP  N PS    HRRSPTLLMASTLHSLSK        Y   PP+++ +
Subjt:  MALKFNPVVNLPCLNPPSKHQRHRRSPTLLMASTLHSLSKYVLTYLNNYDDLPPKQLQL

A0A6J1EZ03 Acyl-[acyl-carrier-protein] desaturase6.0e-0552.54Show/hide
Query:  MALKFNPVVNLPCLNPPSKHQRHRRSPTLLMASTLHSLSKYVLTYLNNYDDLPPKQLQL
        MAL  NP V  P    PS+H R RRSPTLLMASTLHSLSK        Y   PP+++ +
Subjt:  MALKFNPVVNLPCLNPPSKHQRHRRSPTLLMASTLHSLSKYVLTYLNNYDDLPPKQLQL

A0A6J1K9I0 Acyl-[acyl-carrier-protein] desaturase4.6e-0550.85Show/hide
Query:  MALKFNPVVNLPCLNPPSKHQRHRRSPTLLMASTLHSLSKYVLTYLNNYDDLPPKQLQL
        MAL+ NP V  P    PS+H R RRSPT+LMASTLHSLSK        Y   PP+++ +
Subjt:  MALKFNPVVNLPCLNPPSKHQRHRRSPTLLMASTLHSLSKYVLTYLNNYDDLPPKQLQL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTCTCAAGTTCAATCCAGTAGTGAACCTTCCATGTCTCAATCCCCCTTCCAAACACCAACGCCATCGCAGATCTCCCACTCTTCTCATGGCCTCCACTCTA
CACTCTCTCTCCAAATATGTTCTGACATATTTGAACAATTATGATGATCTACCTCCCAAACAGCTACAATTGATTGGAATAGATGAGATTGGTCTGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCTCTCAAGTTCAATCCAGTAGTGAACCTTCCATGTCTCAATCCCCCTTCCAAACACCAACGCCATCGCAGATCTCCCACTCTTCTCATGGCCTCCACTCTA
CACTCTCTCTCCAAATATGTTCTGACATATTTGAACAATTATGATGATCTACCTCCCAAACAGCTACAATTGATTGGAATAGATGAGATTGGTCTGTAA
Protein sequenceShow/hide protein sequence
MALKFNPVVNLPCLNPPSKHQRHRRSPTLLMASTLHSLSKYVLTYLNNYDDLPPKQLQLIGIDEIGL