; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10006027 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10006027
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Descriptiontranscription factor MYB90-like
Genome locationChr07:11851006..11851491
RNA-Seq ExpressionHG10006027
SyntenyHG10006027
Gene Ontology termsNA
InterPro domainsIPR001005 - SANT/Myb domain
IPR009057 - Homeobox-like domain superfamily
IPR017930 - Myb domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0051303.1 transcription factor MYB90-like [Cucumis melo var. makuwa]4.1e-5482.07Show/hide
Query:  GRLPGRTANDIKNYWNCHLSKKLNGQGVEKPNSTKEGAIFGKPPKWKPFQEEESSKSKGKEYV--DEQNGEISQGILVQ-NQNQNLPIVVEKNSSMSSGN
        GRLPGRTANDIKNYWNCHLSKKLNGQ VEK NS K+G+IFGKP KWKP Q EESSKSKGKEYV  D+QN   SQGILV+ NQNQN PIV+E+NSSMS G 
Subjt:  GRLPGRTANDIKNYWNCHLSKKLNGQGVEKPNSTKEGAIFGKPPKWKPFQEEESSKSKGKEYV--DEQNGEISQGILVQ-NQNQNLPIVVEKNSSMSSGN

Query:  NIQMD-FQFDQQEAVVKAMEDEDGCNKRELWDDWISEMDLWIDSL
        N+QMD FQFDQQ  V+KAMEDEDGCNKRELWDDWISEMDLWIDSL
Subjt:  NIQMD-FQFDQQEAVVKAMEDEDGCNKRELWDDWISEMDLWIDSL

XP_004138976.1 transcription factor MYB1-like [Cucumis sativus]6.1e-5884Show/hide
Query:  RWSIIAGRLPGRTANDIKNYWNCHLSKKLNGQGVEKPNSTKEGAIFGKPPKWKPFQEEESSKSKGKEYVDEQNGEISQGILVQ-NQNQNL-PIVVEKNSS
        RWSIIAGRLPGRTANDIKNYWNCHLSKKLNGQGVEKPNSTKEG+ FGK  KWKP Q EESSKSKGKEYVD+     SQGILVQ NQNQN  PIVVE+NSS
Subjt:  RWSIIAGRLPGRTANDIKNYWNCHLSKKLNGQGVEKPNSTKEGAIFGKPPKWKPFQEEESSKSKGKEYVDEQNGEISQGILVQ-NQNQNL-PIVVEKNSS

Query:  MSSGNNIQMD-FQFDQQEAVVKAMEDEDGCNKRELWDDWISEMDLWIDSL
        MS G N+QMD FQFDQQ  V+KAMEDEDGC+KRELWDDWISEMDLWIDSL
Subjt:  MSSGNNIQMD-FQFDQQEAVVKAMEDEDGCNKRELWDDWISEMDLWIDSL

XP_008441809.1 PREDICTED: transcription factor MYB90-like [Cucumis melo]7.2e-5983.44Show/hide
Query:  RWSIIAGRLPGRTANDIKNYWNCHLSKKLNGQGVEKPNSTKEGAIFGKPPKWKPFQEEESSKSKGKEYV--DEQNGEISQGILVQ-NQNQNLPIVVEKNS
        RWSIIAGRLPGRTANDIKNYWNCHLSKKLNGQ VEKPNS K+G+IFGKP KWKP Q EESSKSKGKEYV  D+QN   SQGILV+ NQNQN PIV+E+NS
Subjt:  RWSIIAGRLPGRTANDIKNYWNCHLSKKLNGQGVEKPNSTKEGAIFGKPPKWKPFQEEESSKSKGKEYV--DEQNGEISQGILVQ-NQNQNLPIVVEKNS

Query:  SMSSGNNIQMD-FQFDQQEAVVKAMEDEDGCNKRELWDDWISEMDLWIDSL
        SMS G N+QMD FQFDQQ  V+KAMEDEDGCNKRELWDDWISEMDLWIDSL
Subjt:  SMSSGNNIQMD-FQFDQQEAVVKAMEDEDGCNKRELWDDWISEMDLWIDSL

XP_022997553.1 transcription factor MYB1-like [Cucurbita maxima]2.0e-4569.8Show/hide
Query:  RWSIIAGRLPGRTANDIKNYWNCHLSKKLNGQ--GVEKPNSTKEGAIFGKPPKWKPFQEEESSKSKGKEYVDEQNGEISQGILVQNQNQNLPIVVEKNSS
        RWSIIAGRLPGRTANDIKNYWNCHLSKK+NG   G +KPNST          KWKP Q EESSKSK KEY+++QNGE  QGIL+QNQNQN+PIV +  S 
Subjt:  RWSIIAGRLPGRTANDIKNYWNCHLSKKLNGQ--GVEKPNSTKEGAIFGKPPKWKPFQEEESSKSKGKEYVDEQNGEISQGILVQNQNQNLPIVVEKNSS

Query:  MSSGNNIQMDFQFDQQEAVVKAMEDEDGCNKRELWDDWISEMDLWIDSL
             NIQMD+QFDQ+   V AM D DGCNKRELWDDW+SEMDLWIDSL
Subjt:  MSSGNNIQMDFQFDQQEAVVKAMEDEDGCNKRELWDDWISEMDLWIDSL

XP_038891035.1 transcription factor MYB1-like [Benincasa hispida]2.8e-6387.84Show/hide
Query:  RWSIIAGRLPGRTANDIKNYWNCHLSKKLNGQGVEKPNSTKEGAIFGKPPKWKPFQEEESSKSKGKEYVDEQNGEISQGILVQ-NQNQNLPIVVEKNSSM
        RWSIIAGRLPGRTANDIKNYWNCHLSK+LNGQGVEK NSTKE  IFGKPPKWKP Q EESSKSKGKEYVD+QNGEISQGILVQ N NQNLPIVVE+NSSM
Subjt:  RWSIIAGRLPGRTANDIKNYWNCHLSKKLNGQGVEKPNSTKEGAIFGKPPKWKPFQEEESSKSKGKEYVDEQNGEISQGILVQ-NQNQNLPIVVEKNSSM

Query:  SSGNNIQMDFQFDQQEAVVKAMEDEDGCNKRELWDDWISEMDLWIDSL
        S G ++QMDF+FDQQ  VVKAMEDEDG NKRELWDDWISEMDLWIDSL
Subjt:  SSGNNIQMDFQFDQQEAVVKAMEDEDGCNKRELWDDWISEMDLWIDSL

TrEMBL top hitse value%identityAlignment
A0A1S3B4A4 transcription factor MYB90-like3.5e-5983.44Show/hide
Query:  RWSIIAGRLPGRTANDIKNYWNCHLSKKLNGQGVEKPNSTKEGAIFGKPPKWKPFQEEESSKSKGKEYV--DEQNGEISQGILVQ-NQNQNLPIVVEKNS
        RWSIIAGRLPGRTANDIKNYWNCHLSKKLNGQ VEKPNS K+G+IFGKP KWKP Q EESSKSKGKEYV  D+QN   SQGILV+ NQNQN PIV+E+NS
Subjt:  RWSIIAGRLPGRTANDIKNYWNCHLSKKLNGQGVEKPNSTKEGAIFGKPPKWKPFQEEESSKSKGKEYV--DEQNGEISQGILVQ-NQNQNLPIVVEKNS

Query:  SMSSGNNIQMD-FQFDQQEAVVKAMEDEDGCNKRELWDDWISEMDLWIDSL
        SMS G N+QMD FQFDQQ  V+KAMEDEDGCNKRELWDDWISEMDLWIDSL
Subjt:  SMSSGNNIQMD-FQFDQQEAVVKAMEDEDGCNKRELWDDWISEMDLWIDSL

A0A5A7U600 Transcription factor MYB90-like2.0e-5482.07Show/hide
Query:  GRLPGRTANDIKNYWNCHLSKKLNGQGVEKPNSTKEGAIFGKPPKWKPFQEEESSKSKGKEYV--DEQNGEISQGILVQ-NQNQNLPIVVEKNSSMSSGN
        GRLPGRTANDIKNYWNCHLSKKLNGQ VEK NS K+G+IFGKP KWKP Q EESSKSKGKEYV  D+QN   SQGILV+ NQNQN PIV+E+NSSMS G 
Subjt:  GRLPGRTANDIKNYWNCHLSKKLNGQGVEKPNSTKEGAIFGKPPKWKPFQEEESSKSKGKEYV--DEQNGEISQGILVQ-NQNQNLPIVVEKNSSMSSGN

Query:  NIQMD-FQFDQQEAVVKAMEDEDGCNKRELWDDWISEMDLWIDSL
        N+QMD FQFDQQ  V+KAMEDEDGCNKRELWDDWISEMDLWIDSL
Subjt:  NIQMD-FQFDQQEAVVKAMEDEDGCNKRELWDDWISEMDLWIDSL

A0A6J1CTG0 transcription factor WER-like9.5e-4164.6Show/hide
Query:  RWSIIAGRLPGRTANDIKNYWNCHLSKKLNGQ--GVE--KPNSTKEGAIFGKPPKWKPFQEEES-SKSKGK----EYVDEQNGEISQG-ILVQNQNQNLP
        RWS+IAGRLPGRTANDIKNYWNCHLSKKLNGQ  GVE  + N TKE A FGKP  W+  QEE S S++KGK    ++    NGE SQ  ILVQNQNQNLP
Subjt:  RWSIIAGRLPGRTANDIKNYWNCHLSKKLNGQ--GVE--KPNSTKEGAIFGKPPKWKPFQEEES-SKSKGK----EYVDEQNGEISQG-ILVQNQNQNLP

Query:  IVVEKNS-SMSSGNNIQMDFQFDQQEAVVKAMED---EDGCNKRELWDDWISEMDLWIDSL
        I+VE+ S SM S  N+QM+F         KA+ED   + GCNKRE+WDDWISEMDLWIDSL
Subjt:  IVVEKNS-SMSSGNNIQMDFQFDQQEAVVKAMED---EDGCNKRELWDDWISEMDLWIDSL

A0A6J1EYC9 transcription factor MYB1-like9.9e-4669.8Show/hide
Query:  RWSIIAGRLPGRTANDIKNYWNCHLSKKLNGQ--GVEKPNSTKEGAIFGKPPKWKPFQEEESSKSKGKEYVDEQNGEISQGILVQNQNQNLPIVVEKNSS
        RWSIIAGRLPGRTANDIKNYWNCHLSKK+NG   G +KPNST          KWKP Q EESSKSK KEYV++QNGE  QGIL+QNQNQN+PI+ +  S 
Subjt:  RWSIIAGRLPGRTANDIKNYWNCHLSKKLNGQ--GVEKPNSTKEGAIFGKPPKWKPFQEEESSKSKGKEYVDEQNGEISQGILVQNQNQNLPIVVEKNSS

Query:  MSSGNNIQMDFQFDQQEAVVKAMEDEDGCNKRELWDDWISEMDLWIDSL
             NIQMD+QFDQ+   V AM D DGCNKRELWDDW+SEMDLWIDSL
Subjt:  MSSGNNIQMDFQFDQQEAVVKAMEDEDGCNKRELWDDWISEMDLWIDSL

A0A6J1KE93 transcription factor MYB1-like9.9e-4669.8Show/hide
Query:  RWSIIAGRLPGRTANDIKNYWNCHLSKKLNGQ--GVEKPNSTKEGAIFGKPPKWKPFQEEESSKSKGKEYVDEQNGEISQGILVQNQNQNLPIVVEKNSS
        RWSIIAGRLPGRTANDIKNYWNCHLSKK+NG   G +KPNST          KWKP Q EESSKSK KEY+++QNGE  QGIL+QNQNQN+PIV +  S 
Subjt:  RWSIIAGRLPGRTANDIKNYWNCHLSKKLNGQ--GVEKPNSTKEGAIFGKPPKWKPFQEEESSKSKGKEYVDEQNGEISQGILVQNQNQNLPIVVEKNSS

Query:  MSSGNNIQMDFQFDQQEAVVKAMEDEDGCNKRELWDDWISEMDLWIDSL
             NIQMD+QFDQ+   V AM D DGCNKRELWDDW+SEMDLWIDSL
Subjt:  MSSGNNIQMDFQFDQQEAVVKAMEDEDGCNKRELWDDWISEMDLWIDSL

SwissProt top hitse value%identityAlignment
Q9FE25 Transcription factor MYB753.2e-0989.29Show/hide
Query:  RWSIIAGRLPGRTANDIKNYWNCHLSKK
        RWS+IAGRLPGRTAND+KNYWN HLSKK
Subjt:  RWSIIAGRLPGRTANDIKNYWNCHLSKK

Q9FNV8 Transcription factor MYB1143.2e-0989.29Show/hide
Query:  RWSIIAGRLPGRTANDIKNYWNCHLSKK
        RWS+IAGRLPGRTAND+KNYWN HLSKK
Subjt:  RWSIIAGRLPGRTANDIKNYWNCHLSKK

Q9FNV9 Transcription factor MYB1133.2e-0989.29Show/hide
Query:  RWSIIAGRLPGRTANDIKNYWNCHLSKK
        RWS+IAGRLPGRTAND+KNYWN HLSKK
Subjt:  RWSIIAGRLPGRTANDIKNYWNCHLSKK

Q9LTF7 Transcription factor MYB823.2e-0945.21Show/hide
Query:  RWSIIAGRLPGRTANDIKNYWNCHLSKKLNGQGVEKPNSTKEGAIFGKPPKWKPFQEEESSKSKGKEYVDEQN
        RWS+IAGRLPGRT N++KNYWN HL+KK N +    P    E  +   P   KP    E  +S G+   +E N
Subjt:  RWSIIAGRLPGRTANDIKNYWNCHLSKKLNGQGVEKPNSTKEGAIFGKPPKWKPFQEEESSKSKGKEYVDEQN

Q9ZTC3 Transcription factor MYB903.2e-0989.29Show/hide
Query:  RWSIIAGRLPGRTANDIKNYWNCHLSKK
        RWS+IAGRLPGRTAND+KNYWN HLSKK
Subjt:  RWSIIAGRLPGRTANDIKNYWNCHLSKK

Arabidopsis top hitse value%identityAlignment
AT1G56650.1 production of anthocyanin pigment 12.3e-1089.29Show/hide
Query:  RWSIIAGRLPGRTANDIKNYWNCHLSKK
        RWS+IAGRLPGRTAND+KNYWN HLSKK
Subjt:  RWSIIAGRLPGRTANDIKNYWNCHLSKK

AT1G66370.1 myb domain protein 1132.3e-1089.29Show/hide
Query:  RWSIIAGRLPGRTANDIKNYWNCHLSKK
        RWS+IAGRLPGRTAND+KNYWN HLSKK
Subjt:  RWSIIAGRLPGRTANDIKNYWNCHLSKK

AT1G66380.1 myb domain protein 1142.3e-1089.29Show/hide
Query:  RWSIIAGRLPGRTANDIKNYWNCHLSKK
        RWS+IAGRLPGRTAND+KNYWN HLSKK
Subjt:  RWSIIAGRLPGRTANDIKNYWNCHLSKK

AT1G66390.1 myb domain protein 902.3e-1089.29Show/hide
Query:  RWSIIAGRLPGRTANDIKNYWNCHLSKK
        RWS+IAGRLPGRTAND+KNYWN HLSKK
Subjt:  RWSIIAGRLPGRTANDIKNYWNCHLSKK

AT5G52600.1 myb domain protein 822.3e-1045.21Show/hide
Query:  RWSIIAGRLPGRTANDIKNYWNCHLSKKLNGQGVEKPNSTKEGAIFGKPPKWKPFQEEESSKSKGKEYVDEQN
        RWS+IAGRLPGRT N++KNYWN HL+KK N +    P    E  +   P   KP    E  +S G+   +E N
Subjt:  RWSIIAGRLPGRTANDIKNYWNCHLSKKLNGQGVEKPNSTKEGAIFGKPPKWKPFQEEESSKSKGKEYVDEQN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTAGATTTTTGCAACTATCCTTTTTGTTTTTGGTGTGTTAGGTGGTCAATCATTGCTGGAAGATTACCAGGAAGAACAGCAAATGACATAAAGAACTATTGGAATTG
CCATTTGAGCAAAAAGTTGAATGGTCAAGGAGTTGAGAAGCCAAATTCGACAAAAGAAGGAGCCATTTTTGGCAAACCACCAAAGTGGAAGCCTTTTCAAGAAGAAGAGA
GCAGCAAATCAAAAGGAAAAGAATATGTTGATGAGCAAAATGGAGAAATTAGCCAAGGAATATTGGTACAAAATCAGAATCAAAACTTACCAATTGTTGTTGAAAAAAAT
AGTAGCATGAGTTCGGGAAATAATATTCAAATGGACTTCCAATTTGATCAACAAGAAGCTGTGGTCAAAGCAATGGAGGATGAAGATGGCTGCAACAAGAGGGAGCTTTG
GGATGATTGGATCTCAGAGATGGATCTTTGGATTGATTCTTTGTGA
mRNA sequenceShow/hide mRNA sequence
ATGCTAGATTTTTGCAACTATCCTTTTTGTTTTTGGTGTGTTAGGTGGTCAATCATTGCTGGAAGATTACCAGGAAGAACAGCAAATGACATAAAGAACTATTGGAATTG
CCATTTGAGCAAAAAGTTGAATGGTCAAGGAGTTGAGAAGCCAAATTCGACAAAAGAAGGAGCCATTTTTGGCAAACCACCAAAGTGGAAGCCTTTTCAAGAAGAAGAGA
GCAGCAAATCAAAAGGAAAAGAATATGTTGATGAGCAAAATGGAGAAATTAGCCAAGGAATATTGGTACAAAATCAGAATCAAAACTTACCAATTGTTGTTGAAAAAAAT
AGTAGCATGAGTTCGGGAAATAATATTCAAATGGACTTCCAATTTGATCAACAAGAAGCTGTGGTCAAAGCAATGGAGGATGAAGATGGCTGCAACAAGAGGGAGCTTTG
GGATGATTGGATCTCAGAGATGGATCTTTGGATTGATTCTTTGTGA
Protein sequenceShow/hide protein sequence
MLDFCNYPFCFWCVRWSIIAGRLPGRTANDIKNYWNCHLSKKLNGQGVEKPNSTKEGAIFGKPPKWKPFQEEESSKSKGKEYVDEQNGEISQGILVQNQNQNLPIVVEKN
SSMSSGNNIQMDFQFDQQEAVVKAMEDEDGCNKRELWDDWISEMDLWIDSL