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HG10006035 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10006035
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationChr07:11912279..11913796
RNA-Seq ExpressionHG10006035
SyntenyHG10006035
Gene Ontology termsGO:0006464 - cellular protein modification process (biological process)
GO:0006796 - phosphate-containing compound metabolic process (biological process)
GO:0016020 - membrane (cellular component)
GO:0032991 - protein-containing complex (cellular component)
GO:0043231 - intracellular membrane-bounded organelle (cellular component)
GO:0008233 - peptidase activity (molecular function)
GO:0097159 - organic cyclic compound binding (molecular function)
GO:1901363 - heterocyclic compound binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0035739.1 hypothetical protein E6C27_scaffold403G00100 [Cucumis melo var. makuwa]1.3e-2150.98Show/hide
Query:  WHRLFSIFNLCRGFDYSSSNNVLQILIGPSLKKGPKTPWHTVVKALLVEMWFERNQRVFHDNATPWLERFKIARLNASTWCTQSKSLVDFSIQDISLNWR
        W R+FS+FNL   FD S S +V+Q+L G +L K P+  W  + KALL+E+W ERNQR+FHD A    E    A LNA+ WC+  K  V++SIQDI LNW 
Subjt:  WHRLFSIFNLCRGFDYSSSNNVLQILIGPSLKKGPKTPWHTVVKALLVEMWFERNQRVFHDNATPWLERFKIARLNASTWCTQSKSLVDFSIQDISLNWR

Query:  AL
        A+
Subjt:  AL

KAA0062564.1 GPI-anchor transamidase isoform X1 [Cucumis melo var. makuwa]7.1e-2348.57Show/hide
Query:  RCWHRLFSIFNLCRGFDYSSSNNVLQILIGPSLKKGPKTPWHTVVKALLVEMWFERNQRVFHDNATPWLERFKIARLNASTWCTQSKSLVDFSIQDISLN
        +CW  L S+F +   FD S ++N+ QIL+G SLK+GP+  W  + KALL ++WFE NQR+F      W ER  IA+ NA+TWC  +K  +D+SIQD+S+N
Subjt:  RCWHRLFSIFNLCRGFDYSSSNNVLQILIGPSLKKGPKTPWHTVVKALLVEMWFERNQRVFHDNATPWLERFKIARLNASTWCTQSKSLVDFSIQDISLN

Query:  WRALI
        W A I
Subjt:  WRALI

KAA0068192.1 mediator of RNA polymerase II transcription subunit 8 isoform X2 [Cucumis melo var. makuwa]7.6e-1732.39Show/hide
Query:  ENKVLSVAAKLSCKVEQLPIIYL--GLPLGGYP----------------KKVSFWQPVINKVHGK-LDRW-----------------RRCWHRL--FSIF
        E+ +L  AA++ CK E LPIIYL  GL LGG                  +  +FW+ +I+++HGK    W                  R W  +   ++ 
Subjt:  ENKVLSVAAKLSCKVEQLPIIYL--GLPLGGYP----------------KKVSFWQPVINKVHGK-LDRW-----------------RRCWHRL--FSIF

Query:  NLCRGFDYSSSNNVLQ------------------ILIGPSLKKGPKTPWHTVVKALLVEMWFERNQRVFHDNATPWLERFKIARLNA-STWCTQSKSLVD
         L  G   S   ++LQ                  +  GP L K P+  W  + KALL E+WFERNQ +FH    P LE    A+ NA   WC+ +K   D
Subjt:  NLCRGFDYSSSNNVLQ------------------ILIGPSLKKGPKTPWHTVVKALLVEMWFERNQRVFHDNATPWLERFKIARLNA-STWCTQSKSLVD

Query:  FSIQDISLNWRAL
        +SIQ+I LNW  L
Subjt:  FSIQDISLNWRAL

TYK21876.1 hypothetical protein E5676_scaffold494G00090 [Cucumis melo var. makuwa]3.9e-2149.51Show/hide
Query:  WHRLFSIFNLCRGFDYSSSNNVLQILIGPSLKKGPKTPWHTVVKALLVEMWFERNQRVFHDNATPWLERFKIARLNASTWCTQSKSLVDFSIQDISLNWR
        W R+FS+FNL   FD S S +V+Q+L G +L K P+  W  + KALL+E+W ERNQR+FHD A    E    A LNA+ WC+  K  V++SIQDI LNW 
Subjt:  WHRLFSIFNLCRGFDYSSSNNVLQILIGPSLKKGPKTPWHTVVKALLVEMWFERNQRVFHDNATPWLERFKIARLNASTWCTQSKSLVDFSIQDISLNWR

Query:  ALI
          +
Subjt:  ALI

XP_038880332.1 uncharacterized protein LOC120071973 [Benincasa hispida]9.0e-1868.12Show/hide
Query:  MEENKVLSVAAKLSCKVEQLPIIYLGLPLGGYPKKVSFWQPVINKVHGKLDRWRRCWHRLFSIFNLCRG
        +EENK+LSVAA+L+CKV+ LP++YLGLPLGGYPK VSFWQPVI+K+ GKLD+WRR        FNL RG
Subjt:  MEENKVLSVAAKLSCKVEQLPIIYLGLPLGGYPKKVSFWQPVINKVHGKLDRWRRCWHRLFSIFNLCRG

TrEMBL top hitse value%identityAlignment
A0A5A7T2Y0 zf-RVT domain-containing protein6.5e-2250.98Show/hide
Query:  WHRLFSIFNLCRGFDYSSSNNVLQILIGPSLKKGPKTPWHTVVKALLVEMWFERNQRVFHDNATPWLERFKIARLNASTWCTQSKSLVDFSIQDISLNWR
        W R+FS+FNL   FD S S +V+Q+L G +L K P+  W  + KALL+E+W ERNQR+FHD A    E    A LNA+ WC+  K  V++SIQDI LNW 
Subjt:  WHRLFSIFNLCRGFDYSSSNNVLQILIGPSLKKGPKTPWHTVVKALLVEMWFERNQRVFHDNATPWLERFKIARLNASTWCTQSKSLVDFSIQDISLNWR

Query:  AL
        A+
Subjt:  AL

A0A5A7V5N8 GPI-anchor transamidase isoform X13.4e-2348.57Show/hide
Query:  RCWHRLFSIFNLCRGFDYSSSNNVLQILIGPSLKKGPKTPWHTVVKALLVEMWFERNQRVFHDNATPWLERFKIARLNASTWCTQSKSLVDFSIQDISLN
        +CW  L S+F +   FD S ++N+ QIL+G SLK+GP+  W  + KALL ++WFE NQR+F      W ER  IA+ NA+TWC  +K  +D+SIQD+S+N
Subjt:  RCWHRLFSIFNLCRGFDYSSSNNVLQILIGPSLKKGPKTPWHTVVKALLVEMWFERNQRVFHDNATPWLERFKIARLNASTWCTQSKSLVDFSIQDISLN

Query:  WRALI
        W A I
Subjt:  WRALI

A0A5D3DC06 Mediator of RNA polymerase II transcription subunit 8 isoform X23.7e-1732.39Show/hide
Query:  ENKVLSVAAKLSCKVEQLPIIYL--GLPLGGYP----------------KKVSFWQPVINKVHGK-LDRW-----------------RRCWHRL--FSIF
        E+ +L  AA++ CK E LPIIYL  GL LGG                  +  +FW+ +I+++HGK    W                  R W  +   ++ 
Subjt:  ENKVLSVAAKLSCKVEQLPIIYL--GLPLGGYP----------------KKVSFWQPVINKVHGK-LDRW-----------------RRCWHRL--FSIF

Query:  NLCRGFDYSSSNNVLQ------------------ILIGPSLKKGPKTPWHTVVKALLVEMWFERNQRVFHDNATPWLERFKIARLNA-STWCTQSKSLVD
         L  G   S   ++LQ                  +  GP L K P+  W  + KALL E+WFERNQ +FH    P LE    A+ NA   WC+ +K   D
Subjt:  NLCRGFDYSSSNNVLQ------------------ILIGPSLKKGPKTPWHTVVKALLVEMWFERNQRVFHDNATPWLERFKIARLNA-STWCTQSKSLVD

Query:  FSIQDISLNWRAL
        +SIQ+I LNW  L
Subjt:  FSIQDISLNWRAL

A0A5D3DE60 zf-RVT domain-containing protein1.9e-2149.51Show/hide
Query:  WHRLFSIFNLCRGFDYSSSNNVLQILIGPSLKKGPKTPWHTVVKALLVEMWFERNQRVFHDNATPWLERFKIARLNASTWCTQSKSLVDFSIQDISLNWR
        W R+FS+FNL   FD S S +V+Q+L G +L K P+  W  + KALL+E+W ERNQR+FHD A    E    A LNA+ WC+  K  V++SIQDI LNW 
Subjt:  WHRLFSIFNLCRGFDYSSSNNVLQILIGPSLKKGPKTPWHTVVKALLVEMWFERNQRVFHDNATPWLERFKIARLNASTWCTQSKSLVDFSIQDISLNWR

Query:  ALI
          +
Subjt:  ALI

A0A5D3DZ52 GPI-anchor transamidase isoform X19.4e-1350Show/hide
Query:  GPKTPWHTVVKALLVEMWFERNQRVFHDNATPWLERFKIARLNASTWCTQSKSLVDFSIQDISLNWRALI
        GP+  W  + KALL ++WFE NQR+F      W ER  IA+ NA+TWC  +K  +D+SIQD+S+NW A I
Subjt:  GPKTPWHTVVKALLVEMWFERNQRVFHDNATPWLERFKIARLNASTWCTQSKSLVDFSIQDISLNWRALI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGAAAATAAAGTACTTTCTGTGGCAGCAAAGCTGAGTTGTAAAGTCGAGCAGTTGCCAATCATATACCTTGGGTTACCTTTGGGTGGATACCCCAAAAAAGTCTC
CTTTTGGCAGCCGGTTATTAATAAAGTCCATGGCAAGTTAGATAGATGGAGAAGGTGTTGGCATCGCTTGTTCTCCATTTTCAATCTTTGCCGGGGGTTTGATTATAGTT
CTAGTAACAATGTACTGCAGATTCTGATTGGTCCTTCTCTTAAGAAAGGGCCTAAGACACCATGGCATACTGTGGTTAAAGCTTTGCTTGTTGAAATGTGGTTTGAAAGA
AACCAAAGAGTGTTCCATGATAACGCAACTCCTTGGCTTGAGCGTTTCAAGATTGCACGACTTAACGCTTCCACTTGGTGCACACAATCTAAATCATTAGTGGACTTCTC
TATCCAGGATATAAGTTTAAATTGGAGGGCCCTCATTTTTTCCAGCTTAGTAGTCCTTGTTTGTAACAATGTTTGTAGCACTTATATGTATTGGGTGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAGGAAAATAAAGTACTTTCTGTGGCAGCAAAGCTGAGTTGTAAAGTCGAGCAGTTGCCAATCATATACCTTGGGTTACCTTTGGGTGGATACCCCAAAAAAGTCTC
CTTTTGGCAGCCGGTTATTAATAAAGTCCATGGCAAGTTAGATAGATGGAGAAGGTGTTGGCATCGCTTGTTCTCCATTTTCAATCTTTGCCGGGGGTTTGATTATAGTT
CTAGTAACAATGTACTGCAGATTCTGATTGGTCCTTCTCTTAAGAAAGGGCCTAAGACACCATGGCATACTGTGGTTAAAGCTTTGCTTGTTGAAATGTGGTTTGAAAGA
AACCAAAGAGTGTTCCATGATAACGCAACTCCTTGGCTTGAGCGTTTCAAGATTGCACGACTTAACGCTTCCACTTGGTGCACACAATCTAAATCATTAGTGGACTTCTC
TATCCAGGATATAAGTTTAAATTGGAGGGCCCTCATTTTTTCCAGCTTAGTAGTCCTTGTTTGTAACAATGTTTGTAGCACTTATATGTATTGGGTGTAA
Protein sequenceShow/hide protein sequence
MEENKVLSVAAKLSCKVEQLPIIYLGLPLGGYPKKVSFWQPVINKVHGKLDRWRRCWHRLFSIFNLCRGFDYSSSNNVLQILIGPSLKKGPKTPWHTVVKALLVEMWFER
NQRVFHDNATPWLERFKIARLNASTWCTQSKSLVDFSIQDISLNWRALIFSSLVVLVCNNVCSTYMYWV