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HG10006043 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10006043
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionRetrovirus-related Pol polyprotein from transposon opus
Genome locationChr07:12187034..12188918
RNA-Seq ExpressionHG10006043
SyntenyHG10006043
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0033353.1 putative S-locus lectin protein kinase family protein [Cucumis melo var. makuwa]2.5e-2432.14Show/hide
Query:  MAPKRSKGKGVASSSRPVQPKYDTNRFPPCVAYENFMHSIAIRNLVPERALSLEANYFPHITTEIQWRGWEALAEQPKDVVGPVIKEFYSGMEEDSDVSI
        M+ K  + +   SS    +  ++ ++F    A + +   +   +++PER L+    + P +   I  RGW    +QP+  V  +++EFY+ M E S  S 
Subjt:  MAPKRSKGKGVASSSRPVQPKYDTNRFPPCVAYENFMHSIAIRNLVPERALSLEANYFPHITTEIQWRGWEALAEQPKDVVGPVIKEFYSGMEEDSDVSI

Query:  VREVRVSFSLSPINSLYHLADIVVDEYVKFLTQPFDEIHVAEVLCGPGIDWIRTNGVAVRLRGTNLTVSNKIWHAFMCARFMLVTRLAEVTKADAL
        VR  +VSF    IN  YHL +   DEY  + ++  D   +   LC PG +WI   G  +R + +NLTVSN++WH F+CA+ + V   + VTK  A+
Subjt:  VREVRVSFSLSPINSLYHLADIVVDEYVKFLTQPFDEIHVAEVLCGPGIDWIRTNGVAVRLRGTNLTVSNKIWHAFMCARFMLVTRLAEVTKADAL

KGN46897.1 hypothetical protein Csa_020731 [Cucumis sativus]1.3e-2331.63Show/hide
Query:  MAPKRSKGKGVASSSRPVQPKYDTNRFPPCVAYENFMHSIAIRNLVPERALSLEANYFPHITTEIQWRGWEALAEQPKDVVGPVIKEFYSGMEEDSDVSI
        M+ K  + +   SS    +  ++ ++F    A + +   +   +++PER L+    + P +   I  RGW    +QP+  V  +++EFY+ M E S  S 
Subjt:  MAPKRSKGKGVASSSRPVQPKYDTNRFPPCVAYENFMHSIAIRNLVPERALSLEANYFPHITTEIQWRGWEALAEQPKDVVGPVIKEFYSGMEEDSDVSI

Query:  VREVRVSFSLSPINSLYHLADIVVDEYVKFLTQPFDEIHVAEVLCGPGIDWIRTNGVAVRLRGTNLTVSNKIWHAFMCARFMLVTRLAEVTKADAL
        VR  +VSF    IN  YHL +   DEY  + ++  D   +   LC PG +W+   G  +R + +NLTVSN++WH F+CA+ + V   + VTK  A+
Subjt:  VREVRVSFSLSPINSLYHLADIVVDEYVKFLTQPFDEIHVAEVLCGPGIDWIRTNGVAVRLRGTNLTVSNKIWHAFMCARFMLVTRLAEVTKADAL

PON47308.1 hypothetical protein TorRG33x02_323690 [Trema orientale]2.6e-1331.47Show/hide
Query:  MAPKRSKGKGVASSSRPVQPKYDTNRFPPCVAYENFMHSIAIRNLVPERALSLEANYFPHITTEIQWRGWEALAEQPKDVVGPVIKEFY-SGMEEDSDVS
        MAPKR   K   +S     P +D +RF    A + F +    R ++P++   +  + FP I  EI+ R WE L EQ    +  ++++FY +  E  S ++
Subjt:  MAPKRSKGKGVASSSRPVQPKYDTNRFPPCVAYENFMHSIAIRNLVPERALSLEANYFPHITTEIQWRGWEALAEQPKDVVGPVIKEFY-SGMEEDSDVS

Query:  IVREVRVSFSLSPINSLYHLADIVVDEYVKFLTQPFDEIHVAEVLCGPGIDWIRTNGVAVRLRGTNLTVSNKIWHAFMCARFMLVTRLAEVTKADAL
         V    VSF+   INS + L +I  DE       P D   V +VLC PG DWI        L+   ++VS K W  F+ A  M V+   ++    A+
Subjt:  IVREVRVSFSLSPINSLYHLADIVVDEYVKFLTQPFDEIHVAEVLCGPGIDWIRTNGVAVRLRGTNLTVSNKIWHAFMCARFMLVTRLAEVTKADAL

XP_008458668.1 PREDICTED: uncharacterized protein LOC103497996 [Cucumis melo]1.3e-2039.53Show/hide
Query:  RGWEALAEQPKDVVGPVIKEFYSGMEEDSDVSIVREVRVSFSLSPINSLYHLADIVVDEYVKFLTQPFDEIHVAEVLCGPGIDWIRTNGVAVRLRGTNLT
        RGW    +QP+  V  +++EFY+ M E S  S VR  +VSF    IN  YHL +   DEY  + ++  D   +   LC PG +WI   G  +R + +NLT
Subjt:  RGWEALAEQPKDVVGPVIKEFYSGMEEDSDVSIVREVRVSFSLSPINSLYHLADIVVDEYVKFLTQPFDEIHVAEVLCGPGIDWIRTNGVAVRLRGTNLT

Query:  VSNKIWHAFMCARFMLVTRLAEVTKADAL
        VSN++WH F+CA+ + V   + VTK  A+
Subjt:  VSNKIWHAFMCARFMLVTRLAEVTKADAL

XP_022845662.1 uncharacterized protein LOC111368573 isoform X1 [Olea europaea var. sylvestris]1.4e-1431.28Show/hide
Query:  PKRSKGKGVASSSRPVQPKYDTNRFPPCVAYENFMHSIAIRNLVPERALSLEANYFPHITTEIQWRGWEALAEQPKDVVGPVIKEFYSGMEEDSDVSI-V
        P + K K  ASSS  V   +D  RF    A E +  ++  RN +PER L    N+ P    +I   GWE   EQP  V  P++KEFY    E  +  + V
Subjt:  PKRSKGKGVASSSRPVQPKYDTNRFPPCVAYENFMHSIAIRNLVPERALSLEANYFPHITTEIQWRGWEALAEQPKDVVGPVIKEFYSGMEEDSDVSI-V

Query:  REVRVSFSLSPINSLYHLADIVVDEYVKFLTQPFDEIHVAEVLCGPGIDWIRTNGVAVRLRGTNLTVSNKIWHAFMCARFMLVTRLAEVTKADAL
            + F    IN  YH  DI  D+Y +   +  D   +   +   G +W R+           L  + KIWH F  ++ +  +  +EVTK  AL
Subjt:  REVRVSFSLSPINSLYHLADIVVDEYVKFLTQPFDEIHVAEVLCGPGIDWIRTNGVAVRLRGTNLTVSNKIWHAFMCARFMLVTRLAEVTKADAL

TrEMBL top hitse value%identityAlignment
A0A0A0KER1 Uncharacterized protein6.1e-2431.63Show/hide
Query:  MAPKRSKGKGVASSSRPVQPKYDTNRFPPCVAYENFMHSIAIRNLVPERALSLEANYFPHITTEIQWRGWEALAEQPKDVVGPVIKEFYSGMEEDSDVSI
        M+ K  + +   SS    +  ++ ++F    A + +   +   +++PER L+    + P +   I  RGW    +QP+  V  +++EFY+ M E S  S 
Subjt:  MAPKRSKGKGVASSSRPVQPKYDTNRFPPCVAYENFMHSIAIRNLVPERALSLEANYFPHITTEIQWRGWEALAEQPKDVVGPVIKEFYSGMEEDSDVSI

Query:  VREVRVSFSLSPINSLYHLADIVVDEYVKFLTQPFDEIHVAEVLCGPGIDWIRTNGVAVRLRGTNLTVSNKIWHAFMCARFMLVTRLAEVTKADAL
        VR  +VSF    IN  YHL +   DEY  + ++  D   +   LC PG +W+   G  +R + +NLTVSN++WH F+CA+ + V   + VTK  A+
Subjt:  VREVRVSFSLSPINSLYHLADIVVDEYVKFLTQPFDEIHVAEVLCGPGIDWIRTNGVAVRLRGTNLTVSNKIWHAFMCARFMLVTRLAEVTKADAL

A0A0A0KNI1 AA_kinase domain-containing protein5.9e-1128.95Show/hide
Query:  MAPKRSKGKGVASSSRPVQPKYDTNRFPPCVAYENFMHSIAIRNLVPERALSLEANYFPHITTEIQWRGWEALAEQPKDVVGPVIKEFYSGMEEDSDVSI
        M+ K  + +   SS    +  ++ ++F    A + +   +   +  PER L+    + P +   I  RGW    +QP+  V  +++EFY+ M E S  S 
Subjt:  MAPKRSKGKGVASSSRPVQPKYDTNRFPPCVAYENFMHSIAIRNLVPERALSLEANYFPHITTEIQWRGWEALAEQPKDVVGPVIKEFYSGMEEDSDVSI

Query:  VREVRVSFSLSPINSLYHLADIVVDEYVKFLTQPFDEIHVAEVLCGPGIDWI
        VR  +VSF    IN  YHL +   DEY  + ++  D   +   LC PG +W+
Subjt:  VREVRVSFSLSPINSLYHLADIVVDEYVKFLTQPFDEIHVAEVLCGPGIDWI

A0A1S3C7Y0 uncharacterized protein LOC1034979966.3e-2139.53Show/hide
Query:  RGWEALAEQPKDVVGPVIKEFYSGMEEDSDVSIVREVRVSFSLSPINSLYHLADIVVDEYVKFLTQPFDEIHVAEVLCGPGIDWIRTNGVAVRLRGTNLT
        RGW    +QP+  V  +++EFY+ M E S  S VR  +VSF    IN  YHL +   DEY  + ++  D   +   LC PG +WI   G  +R + +NLT
Subjt:  RGWEALAEQPKDVVGPVIKEFYSGMEEDSDVSIVREVRVSFSLSPINSLYHLADIVVDEYVKFLTQPFDEIHVAEVLCGPGIDWIRTNGVAVRLRGTNLT

Query:  VSNKIWHAFMCARFMLVTRLAEVTKADAL
        VSN++WH F+CA+ + V   + VTK  A+
Subjt:  VSNKIWHAFMCARFMLVTRLAEVTKADAL

A0A2P5BEU1 Uncharacterized protein1.3e-1331.47Show/hide
Query:  MAPKRSKGKGVASSSRPVQPKYDTNRFPPCVAYENFMHSIAIRNLVPERALSLEANYFPHITTEIQWRGWEALAEQPKDVVGPVIKEFY-SGMEEDSDVS
        MAPKR   K   +S     P +D +RF    A + F +    R ++P++   +  + FP I  EI+ R WE L EQ    +  ++++FY +  E  S ++
Subjt:  MAPKRSKGKGVASSSRPVQPKYDTNRFPPCVAYENFMHSIAIRNLVPERALSLEANYFPHITTEIQWRGWEALAEQPKDVVGPVIKEFY-SGMEEDSDVS

Query:  IVREVRVSFSLSPINSLYHLADIVVDEYVKFLTQPFDEIHVAEVLCGPGIDWIRTNGVAVRLRGTNLTVSNKIWHAFMCARFMLVTRLAEVTKADAL
         V    VSF+   INS + L +I  DE       P D   V +VLC PG DWI        L+   ++VS K W  F+ A  M V+   ++    A+
Subjt:  IVREVRVSFSLSPINSLYHLADIVVDEYVKFLTQPFDEIHVAEVLCGPGIDWIRTNGVAVRLRGTNLTVSNKIWHAFMCARFMLVTRLAEVTKADAL

A0A5D3BBY3 Putative S-locus lectin protein kinase family protein1.2e-2432.14Show/hide
Query:  MAPKRSKGKGVASSSRPVQPKYDTNRFPPCVAYENFMHSIAIRNLVPERALSLEANYFPHITTEIQWRGWEALAEQPKDVVGPVIKEFYSGMEEDSDVSI
        M+ K  + +   SS    +  ++ ++F    A + +   +   +++PER L+    + P +   I  RGW    +QP+  V  +++EFY+ M E S  S 
Subjt:  MAPKRSKGKGVASSSRPVQPKYDTNRFPPCVAYENFMHSIAIRNLVPERALSLEANYFPHITTEIQWRGWEALAEQPKDVVGPVIKEFYSGMEEDSDVSI

Query:  VREVRVSFSLSPINSLYHLADIVVDEYVKFLTQPFDEIHVAEVLCGPGIDWIRTNGVAVRLRGTNLTVSNKIWHAFMCARFMLVTRLAEVTKADAL
        VR  +VSF    IN  YHL +   DEY  + ++  D   +   LC PG +WI   G  +R + +NLTVSN++WH F+CA+ + V   + VTK  A+
Subjt:  VREVRVSFSLSPINSLYHLADIVVDEYVKFLTQPFDEIHVAEVLCGPGIDWIRTNGVAVRLRGTNLTVSNKIWHAFMCARFMLVTRLAEVTKADAL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCACCTAAGAGAAGTAAAGGAAAGGGTGTGGCGAGTAGTTCCCGTCCCGTGCAGCCGAAGTACGATACGAATAGATTCCCCCCCTGTGTTGCTTATGAGAACTTTAT
GCACTCCATTGCCATTAGGAACCTAGTTCCTGAGCGAGCCTTGTCATTAGAGGCTAACTATTTCCCCCACATCACCACTGAAATACAGTGGCGTGGTTGGGAGGCATTGG
CAGAGCAGCCAAAAGATGTTGTTGGCCCAGTCATTAAGGAGTTTTACTCTGGGATGGAGGAGGATAGCGATGTCTCCATCGTTAGAGAGGTTAGAGTTTCCTTCTCCCTT
TCTCCAATTAATAGCCTTTATCATTTGGCTGACATAGTAGTGGACGAGTATGTCAAATTTTTAACCCAGCCATTTGATGAGATCCATGTCGCTGAGGTCCTTTGTGGACC
AGGGATAGACTGGATCCGCACTAATGGTGTGGCGGTGCGCCTAAGGGGAACAAATTTGACTGTTTCGAACAAGATCTGGCATGCATTCATGTGTGCTAGATTCATGCTCG
TCACTCGTTTGGCCGAAGTGACCAAAGCGGATGCTTTGCCACCACCAGAGGCTTTGGGCACCCGTGTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCACCTAAGAGAAGTAAAGGAAAGGGTGTGGCGAGTAGTTCCCGTCCCGTGCAGCCGAAGTACGATACGAATAGATTCCCCCCCTGTGTTGCTTATGAGAACTTTAT
GCACTCCATTGCCATTAGGAACCTAGTTCCTGAGCGAGCCTTGTCATTAGAGGCTAACTATTTCCCCCACATCACCACTGAAATACAGTGGCGTGGTTGGGAGGCATTGG
CAGAGCAGCCAAAAGATGTTGTTGGCCCAGTCATTAAGGAGTTTTACTCTGGGATGGAGGAGGATAGCGATGTCTCCATCGTTAGAGAGGTTAGAGTTTCCTTCTCCCTT
TCTCCAATTAATAGCCTTTATCATTTGGCTGACATAGTAGTGGACGAGTATGTCAAATTTTTAACCCAGCCATTTGATGAGATCCATGTCGCTGAGGTCCTTTGTGGACC
AGGGATAGACTGGATCCGCACTAATGGTGTGGCGGTGCGCCTAAGGGGAACAAATTTGACTGTTTCGAACAAGATCTGGCATGCATTCATGTGTGCTAGATTCATGCTCG
TCACTCGTTTGGCCGAAGTGACCAAAGCGGATGCTTTGCCACCACCAGAGGCTTTGGGCACCCGTGTTTGA
Protein sequenceShow/hide protein sequence
MAPKRSKGKGVASSSRPVQPKYDTNRFPPCVAYENFMHSIAIRNLVPERALSLEANYFPHITTEIQWRGWEALAEQPKDVVGPVIKEFYSGMEEDSDVSIVREVRVSFSL
SPINSLYHLADIVVDEYVKFLTQPFDEIHVAEVLCGPGIDWIRTNGVAVRLRGTNLTVSNKIWHAFMCARFMLVTRLAEVTKADALPPPEALGTRV