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HG10006054 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10006054
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionAnkyrin repeat-containing protein
Genome locationChr07:12447461..12447658
RNA-Seq ExpressionHG10006054
SyntenyHG10006054
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0055387.1 ankyrin repeat-containing protein [Cucumis melo var. makuwa]6.3e-1477.59Show/hide
Query:  MRKSKSFPSIPIQHGLSL---TSTSAHHEQVQVVVQGQPIIPPPSMAADDSQSPLTLA
        MRKSKSFPSIPIQ GLSL   T+TS+HHEQV++VV+GQPIIPPPS AADDSQ P T A
Subjt:  MRKSKSFPSIPIQHGLSL---TSTSAHHEQVQVVVQGQPIIPPPSMAADDSQSPLTLA
KGN64482.2 hypothetical protein Csa_013492 [Cucumis sativus]1.7e-1173.33Show/hide
Query:  MRKSKSFPSIPIQHG-LSL----TSTSAHHEQVQVVVQGQPIIPPPSMAADDSQSPLTLA
        MRKSKS PSIPIQ G LSL    T+TS+HHEQV++VV+GQPIIPPPS AADDSQ P T A
Subjt:  MRKSKSFPSIPIQHG-LSL----TSTSAHHEQVQVVVQGQPIIPPPSMAADDSQSPLTLA
XP_004153067.1 ankyrin repeat-containing protein ITN1 isoform X1 [Cucumis sativus]1.7e-1173.33Show/hide
Query:  MRKSKSFPSIPIQHG-LSL----TSTSAHHEQVQVVVQGQPIIPPPSMAADDSQSPLTLA
        MRKSKS PSIPIQ G LSL    T+TS+HHEQV++VV+GQPIIPPPS AADDSQ P T A
Subjt:  MRKSKSFPSIPIQHG-LSL----TSTSAHHEQVQVVVQGQPIIPPPSMAADDSQSPLTLA
XP_008440652.1 PREDICTED: ankyrin repeat-containing protein At3g12360-like [Cucumis melo]6.3e-1477.59Show/hide
Query:  MRKSKSFPSIPIQHGLSL---TSTSAHHEQVQVVVQGQPIIPPPSMAADDSQSPLTLA
        MRKSKSFPSIPIQ GLSL   T+TS+HHEQV++VV+GQPIIPPPS AADDSQ P T A
Subjt:  MRKSKSFPSIPIQHGLSL---TSTSAHHEQVQVVVQGQPIIPPPSMAADDSQSPLTLA
TrEMBL top hitse value%identityAlignment
A0A0A0LWX0 Uncharacterized protein8.4e-1273.33Show/hide
Query:  MRKSKSFPSIPIQHG-LSL----TSTSAHHEQVQVVVQGQPIIPPPSMAADDSQSPLTLA
        MRKSKS PSIPIQ G LSL    T+TS+HHEQV++VV+GQPIIPPPS AADDSQ P T A
Subjt:  MRKSKSFPSIPIQHG-LSL----TSTSAHHEQVQVVVQGQPIIPPPSMAADDSQSPLTLA
A0A1S3B281 ankyrin repeat-containing protein At3g12360-like3.1e-1477.59Show/hide
Query:  MRKSKSFPSIPIQHGLSL---TSTSAHHEQVQVVVQGQPIIPPPSMAADDSQSPLTLA
        MRKSKSFPSIPIQ GLSL   T+TS+HHEQV++VV+GQPIIPPPS AADDSQ P T A
Subjt:  MRKSKSFPSIPIQHGLSL---TSTSAHHEQVQVVVQGQPIIPPPSMAADDSQSPLTLA
A0A5A7ULD5 Ankyrin repeat-containing protein3.1e-1477.59Show/hide
Query:  MRKSKSFPSIPIQHGLSL---TSTSAHHEQVQVVVQGQPIIPPPSMAADDSQSPLTLA
        MRKSKSFPSIPIQ GLSL   T+TS+HHEQV++VV+GQPIIPPPS AADDSQ P T A
Subjt:  MRKSKSFPSIPIQHGLSL---TSTSAHHEQVQVVVQGQPIIPPPSMAADDSQSPLTLA
A0A5D3BJL1 Ankyrin repeat-containing protein3.1e-1477.59Show/hide
Query:  MRKSKSFPSIPIQHGLSL---TSTSAHHEQVQVVVQGQPIIPPPSMAADDSQSPLTLA
        MRKSKSFPSIPIQ GLSL   T+TS+HHEQV++VV+GQPIIPPPS AADDSQ P T A
Subjt:  MRKSKSFPSIPIQHGLSL---TSTSAHHEQVQVVVQGQPIIPPPSMAADDSQSPLTLA
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGAAAGTCAAAGAGTTTCCCTTCAATTCCAATTCAACATGGTTTAAGCCTAACTTCTACATCTGCACATCATGAGCAAGTACAGGTTGTTGTTCAAGGCCAACCCAT
TATTCCTCCGCCGTCTATGGCGGCCGACGACTCCCAATCTCCCCTCACTCTTGCTCAGTTGTTCAATAAGGCGGATATAAAGATTTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGAAAGTCAAAGAGTTTCCCTTCAATTCCAATTCAACATGGTTTAAGCCTAACTTCTACATCTGCACATCATGAGCAAGTACAGGTTGTTGTTCAAGGCCAACCCAT
TATTCCTCCGCCGTCTATGGCGGCCGACGACTCCCAATCTCCCCTCACTCTTGCTCAGTTGTTCAATAAGGCGGATATAAAGATTTGA
Protein sequenceShow/hide protein sequence
MRKSKSFPSIPIQHGLSLTSTSAHHEQVQVVVQGQPIIPPPSMAADDSQSPLTLAQLFNKADIKI