; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10006104 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10006104
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionU3 small nucleolar RNA-associated protein 11
Genome locationChr07:13742547..13745027
RNA-Seq ExpressionHG10006104
SyntenyHG10006104
Gene Ontology termsGO:0006364 - rRNA processing (biological process)
GO:0005730 - nucleolus (cellular component)
GO:0032040 - small-subunit processome (cellular component)
InterPro domainsIPR007144 - Small-subunit processome, Utp11


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8651705.1 hypothetical protein Csa_006293 [Cucumis sativus]3.0e-11193.86Show/hide
Query:  MSSLKNAVPRRPYKERAQPHSRKKFGLLEKHKDYIERAKAFHKKEDTLRKLKEKAAFKNPDEFYFKMIRTRTVDGVHKPESHVNKYTAEQLMLMKTQDAG
        MSSL+NAVPRRPYKERAQP SRKKFGLLEKHKDYI+RAKAFHKKEDTLRKLKEKAAFKNPDEFYFKMIRTRTVDGVHKPESHVNKYTAEQLMLMKTQDAG
Subjt:  MSSLKNAVPRRPYKERAQPHSRKKFGLLEKHKDYIERAKAFHKKEDTLRKLKEKAAFKNPDEFYFKMIRTRTVDGVHKPESHVNKYTAEQLMLMKTQDAG

Query:  YILQKMQSEKRKIEKLTATLHSLDNQPSNKHLYYVEDREEANEILSCSSKGLVASSETVPDSIKRKTIASYKELEARRSRVSELEKLYMDMTLQQELRKK
        YILQKMQSEK+KIEKLTATLHSLDNQPSNKHLY+ EDREEANEILS SSKGLVASSE VPDSI+RKTI+SYKELEARRSRV+ELEKLYMDMTLQQELRKK
Subjt:  YILQKMQSEKRKIEKLTATLHSLDNQPSNKHLYYVEDREEANEILSCSSKGLVASSETVPDSIKRKTIASYKELEARRSRVSELEKLYMDMTLQQELRKK

Query:  GRKRKLREDELANPTSKPVYRWRAERKR
        GRKRKLREDEL+NPT KPVY+WRAERKR
Subjt:  GRKRKLREDELANPTSKPVYRWRAERKR

KAG6586143.1 putative U3 small nucleolar RNA-associated protein 11, partial [Cucurbita argyrosperma subsp. sororia]4.5e-10791.27Show/hide
Query:  MSSLKNAVPRRPYKERAQPHSRKKFGLLEKHKDYIERAKAFHKKEDTLRKLKEKAAFKNPDEFYFKMIRTRTVDGVHKPESHVNKYTAEQLMLMKTQDAG
        MSSLKNAVP+RPYKERAQP+SRKKFGLLEKHKDY+ERAKA+HKKEDTLRKLKEKAAFKNPDEFYFKMI+TRTVDGVH+PES VNKYTAEQLMLMKTQDAG
Subjt:  MSSLKNAVPRRPYKERAQPHSRKKFGLLEKHKDYIERAKAFHKKEDTLRKLKEKAAFKNPDEFYFKMIRTRTVDGVHKPESHVNKYTAEQLMLMKTQDAG

Query:  YILQKMQSEKRKIEKLTATLHSLDNQPSNKHLYYVEDREEANEILSCSSKG-LVASSETVPDSIKRKTIASYKELEARRSRVSELEKLYMDMTLQQELRK
        YILQK+QSEKRKIEKLTATLHSLDNQPSNKH+Y+ EDREEANEI S SSKG  VASSE VPDSIKRKTI+SYKELEARRSRVSELEKLYMDMTLQQEL K
Subjt:  YILQKMQSEKRKIEKLTATLHSLDNQPSNKHLYYVEDREEANEILSCSSKG-LVASSETVPDSIKRKTIASYKELEARRSRVSELEKLYMDMTLQQELRK

Query:  KGRKRKLREDELANPTSKPVYRWRAERKR
        KGRKRKLREDEL NPTSKPVY+WRAERKR
Subjt:  KGRKRKLREDELANPTSKPVYRWRAERKR

XP_004152832.1 probable U3 small nucleolar RNA-associated protein 11 [Cucumis sativus]3.0e-11193.86Show/hide
Query:  MSSLKNAVPRRPYKERAQPHSRKKFGLLEKHKDYIERAKAFHKKEDTLRKLKEKAAFKNPDEFYFKMIRTRTVDGVHKPESHVNKYTAEQLMLMKTQDAG
        MSSL+NAVPRRPYKERAQP SRKKFGLLEKHKDYI+RAKAFHKKEDTLRKLKEKAAFKNPDEFYFKMIRTRTVDGVHKPESHVNKYTAEQLMLMKTQDAG
Subjt:  MSSLKNAVPRRPYKERAQPHSRKKFGLLEKHKDYIERAKAFHKKEDTLRKLKEKAAFKNPDEFYFKMIRTRTVDGVHKPESHVNKYTAEQLMLMKTQDAG

Query:  YILQKMQSEKRKIEKLTATLHSLDNQPSNKHLYYVEDREEANEILSCSSKGLVASSETVPDSIKRKTIASYKELEARRSRVSELEKLYMDMTLQQELRKK
        YILQKMQSEK+KIEKLTATLHSLDNQPSNKHLY+ EDREEANEILS SSKGLVASSE VPDSI+RKTI+SYKELEARRSRV+ELEKLYMDMTLQQELRKK
Subjt:  YILQKMQSEKRKIEKLTATLHSLDNQPSNKHLYYVEDREEANEILSCSSKGLVASSETVPDSIKRKTIASYKELEARRSRVSELEKLYMDMTLQQELRKK

Query:  GRKRKLREDELANPTSKPVYRWRAERKR
        GRKRKLREDEL+NPT KPVY+WRAERKR
Subjt:  GRKRKLREDELANPTSKPVYRWRAERKR

XP_008441892.1 PREDICTED: probable U3 small nucleolar RNA-associated protein 11 [Cucumis melo]6.1e-11294.74Show/hide
Query:  MSSLKNAVPRRPYKERAQPHSRKKFGLLEKHKDYIERAKAFHKKEDTLRKLKEKAAFKNPDEFYFKMIRTRTVDGVHKPESHVNKYTAEQLMLMKTQDAG
        MSSL+NAVPRRPYKERAQP SRKKFGLLEKHKDYIERAKAFHKKEDTLRKLKEKAAFKNPDEFYFKMIRTRTVDGVHKPES VNKYTAEQLMLMKTQDAG
Subjt:  MSSLKNAVPRRPYKERAQPHSRKKFGLLEKHKDYIERAKAFHKKEDTLRKLKEKAAFKNPDEFYFKMIRTRTVDGVHKPESHVNKYTAEQLMLMKTQDAG

Query:  YILQKMQSEKRKIEKLTATLHSLDNQPSNKHLYYVEDREEANEILSCSSKGLVASSETVPDSIKRKTIASYKELEARRSRVSELEKLYMDMTLQQELRKK
        YILQKMQSEK+KIEKLTATLHSLDNQPSNKHLY+ EDREEANEILS SSKGLVASSE VPDSI+RKT+ASYKELEARRSRVSELEKLYMDMTLQQELRKK
Subjt:  YILQKMQSEKRKIEKLTATLHSLDNQPSNKHLYYVEDREEANEILSCSSKGLVASSETVPDSIKRKTIASYKELEARRSRVSELEKLYMDMTLQQELRKK

Query:  GRKRKLREDELANPTSKPVYRWRAERKR
        GRKRKLREDE+ANPTSKPVY+WRAERKR
Subjt:  GRKRKLREDELANPTSKPVYRWRAERKR

XP_038889584.1 probable U3 small nucleolar RNA-associated protein 11 [Benincasa hispida]3.0e-11195.18Show/hide
Query:  MSSLKNAVPRRPYKERAQPHSRKKFGLLEKHKDYIERAKAFHKKEDTLRKLKEKAAFKNPDEFYFKMIRTRTVDGVHKPESHVNKYTAEQLMLMKTQDAG
        MSSL+NAVPRRPYKERAQP SRKKFGLLEKHKDYIERAKAFHKKEDTLRKLKEKAAFKNPDEFYFKMIRTRTVDGVHK ESHVNKYTAE+LMLMKTQDAG
Subjt:  MSSLKNAVPRRPYKERAQPHSRKKFGLLEKHKDYIERAKAFHKKEDTLRKLKEKAAFKNPDEFYFKMIRTRTVDGVHKPESHVNKYTAEQLMLMKTQDAG

Query:  YILQKMQSEKRKIEKLTATLHSLDNQPSNKHLYYVEDREEANEILSCSSKGLVASSETVPDSIKRKTIASYKELEARRSRVSELEKLYMDMTLQQELRKK
        YILQKMQSEKRKIEKLTATLHSLDNQPSNKH Y+ EDREEANEILS SSK LVASSE VPDSIKRKTIASYKELEARRSRVSELEKLYMDMTLQQELRKK
Subjt:  YILQKMQSEKRKIEKLTATLHSLDNQPSNKHLYYVEDREEANEILSCSSKGLVASSETVPDSIKRKTIASYKELEARRSRVSELEKLYMDMTLQQELRKK

Query:  GRKRKLREDELANPTSKPVYRWRAERKR
        GRKRKLREDELANPTSKPVY+WRAERKR
Subjt:  GRKRKLREDELANPTSKPVYRWRAERKR

TrEMBL top hitse value%identityAlignment
A0A0A0LKH7 U3 small nucleolar RNA-associated protein 111.5e-11193.86Show/hide
Query:  MSSLKNAVPRRPYKERAQPHSRKKFGLLEKHKDYIERAKAFHKKEDTLRKLKEKAAFKNPDEFYFKMIRTRTVDGVHKPESHVNKYTAEQLMLMKTQDAG
        MSSL+NAVPRRPYKERAQP SRKKFGLLEKHKDYI+RAKAFHKKEDTLRKLKEKAAFKNPDEFYFKMIRTRTVDGVHKPESHVNKYTAEQLMLMKTQDAG
Subjt:  MSSLKNAVPRRPYKERAQPHSRKKFGLLEKHKDYIERAKAFHKKEDTLRKLKEKAAFKNPDEFYFKMIRTRTVDGVHKPESHVNKYTAEQLMLMKTQDAG

Query:  YILQKMQSEKRKIEKLTATLHSLDNQPSNKHLYYVEDREEANEILSCSSKGLVASSETVPDSIKRKTIASYKELEARRSRVSELEKLYMDMTLQQELRKK
        YILQKMQSEK+KIEKLTATLHSLDNQPSNKHLY+ EDREEANEILS SSKGLVASSE VPDSI+RKTI+SYKELEARRSRV+ELEKLYMDMTLQQELRKK
Subjt:  YILQKMQSEKRKIEKLTATLHSLDNQPSNKHLYYVEDREEANEILSCSSKGLVASSETVPDSIKRKTIASYKELEARRSRVSELEKLYMDMTLQQELRKK

Query:  GRKRKLREDELANPTSKPVYRWRAERKR
        GRKRKLREDEL+NPT KPVY+WRAERKR
Subjt:  GRKRKLREDELANPTSKPVYRWRAERKR

A0A1S3B400 U3 small nucleolar RNA-associated protein 112.9e-11294.74Show/hide
Query:  MSSLKNAVPRRPYKERAQPHSRKKFGLLEKHKDYIERAKAFHKKEDTLRKLKEKAAFKNPDEFYFKMIRTRTVDGVHKPESHVNKYTAEQLMLMKTQDAG
        MSSL+NAVPRRPYKERAQP SRKKFGLLEKHKDYIERAKAFHKKEDTLRKLKEKAAFKNPDEFYFKMIRTRTVDGVHKPES VNKYTAEQLMLMKTQDAG
Subjt:  MSSLKNAVPRRPYKERAQPHSRKKFGLLEKHKDYIERAKAFHKKEDTLRKLKEKAAFKNPDEFYFKMIRTRTVDGVHKPESHVNKYTAEQLMLMKTQDAG

Query:  YILQKMQSEKRKIEKLTATLHSLDNQPSNKHLYYVEDREEANEILSCSSKGLVASSETVPDSIKRKTIASYKELEARRSRVSELEKLYMDMTLQQELRKK
        YILQKMQSEK+KIEKLTATLHSLDNQPSNKHLY+ EDREEANEILS SSKGLVASSE VPDSI+RKT+ASYKELEARRSRVSELEKLYMDMTLQQELRKK
Subjt:  YILQKMQSEKRKIEKLTATLHSLDNQPSNKHLYYVEDREEANEILSCSSKGLVASSETVPDSIKRKTIASYKELEARRSRVSELEKLYMDMTLQQELRKK

Query:  GRKRKLREDELANPTSKPVYRWRAERKR
        GRKRKLREDE+ANPTSKPVY+WRAERKR
Subjt:  GRKRKLREDELANPTSKPVYRWRAERKR

A0A5A7TX11 U3 small nucleolar RNA-associated protein 112.9e-11294.74Show/hide
Query:  MSSLKNAVPRRPYKERAQPHSRKKFGLLEKHKDYIERAKAFHKKEDTLRKLKEKAAFKNPDEFYFKMIRTRTVDGVHKPESHVNKYTAEQLMLMKTQDAG
        MSSL+NAVPRRPYKERAQP SRKKFGLLEKHKDYIERAKAFHKKEDTLRKLKEKAAFKNPDEFYFKMIRTRTVDGVHKPES VNKYTAEQLMLMKTQDAG
Subjt:  MSSLKNAVPRRPYKERAQPHSRKKFGLLEKHKDYIERAKAFHKKEDTLRKLKEKAAFKNPDEFYFKMIRTRTVDGVHKPESHVNKYTAEQLMLMKTQDAG

Query:  YILQKMQSEKRKIEKLTATLHSLDNQPSNKHLYYVEDREEANEILSCSSKGLVASSETVPDSIKRKTIASYKELEARRSRVSELEKLYMDMTLQQELRKK
        YILQKMQSEK+KIEKLTATLHSLDNQPSNKHLY+ EDREEANEILS SSKGLVASSE VPDSI+RKT+ASYKELEARRSRVSELEKLYMDMTLQQELRKK
Subjt:  YILQKMQSEKRKIEKLTATLHSLDNQPSNKHLYYVEDREEANEILSCSSKGLVASSETVPDSIKRKTIASYKELEARRSRVSELEKLYMDMTLQQELRKK

Query:  GRKRKLREDELANPTSKPVYRWRAERKR
        GRKRKLREDE+ANPTSKPVY+WRAERKR
Subjt:  GRKRKLREDELANPTSKPVYRWRAERKR

A0A6J1FGQ3 U3 small nucleolar RNA-associated protein 111.4e-10690.83Show/hide
Query:  MSSLKNAVPRRPYKERAQPHSRKKFGLLEKHKDYIERAKAFHKKEDTLRKLKEKAAFKNPDEFYFKMIRTRTVDGVHKPESHVNKYTAEQLMLMKTQDAG
        MSSLKNAVP+RPYKERAQP+SRKKFGLLEKHKDY+ERAKA+HKKEDTLRKLKEKAAFKNPDEFYFKMI+TRTVDGVH+PES VNKYTAEQLMLMKTQDAG
Subjt:  MSSLKNAVPRRPYKERAQPHSRKKFGLLEKHKDYIERAKAFHKKEDTLRKLKEKAAFKNPDEFYFKMIRTRTVDGVHKPESHVNKYTAEQLMLMKTQDAG

Query:  YILQKMQSEKRKIEKLTATLHSLDNQPSNKHLYYVEDREEANEILSCSSKG-LVASSETVPDSIKRKTIASYKELEARRSRVSELEKLYMDMTLQQELRK
        YILQK+QSEKRKIEKLTATLHSLDNQPSNKH+Y+ EDREEANEI S SSK   VASSE VPDSIKRKTI+SYKELEARRSRVSELEKLYMDMTLQQEL K
Subjt:  YILQKMQSEKRKIEKLTATLHSLDNQPSNKHLYYVEDREEANEILSCSSKG-LVASSETVPDSIKRKTIASYKELEARRSRVSELEKLYMDMTLQQELRK

Query:  KGRKRKLREDELANPTSKPVYRWRAERKR
        KGRKRKLREDEL NPTSKPVY+WRAERKR
Subjt:  KGRKRKLREDELANPTSKPVYRWRAERKR

A0A6J1HNU6 U3 small nucleolar RNA-associated protein 111.9e-10690.83Show/hide
Query:  MSSLKNAVPRRPYKERAQPHSRKKFGLLEKHKDYIERAKAFHKKEDTLRKLKEKAAFKNPDEFYFKMIRTRTVDGVHKPESHVNKYTAEQLMLMKTQDAG
        MSSLKNAVP+RPYKERAQP+SRKKFGLLEKHKDY+ERAKA+HKKEDTLRKLKEKAAFKNPDEFYFKMI+TRTVDGVH+PES VNKYTAEQLMLMKTQDAG
Subjt:  MSSLKNAVPRRPYKERAQPHSRKKFGLLEKHKDYIERAKAFHKKEDTLRKLKEKAAFKNPDEFYFKMIRTRTVDGVHKPESHVNKYTAEQLMLMKTQDAG

Query:  YILQKMQSEKRKIEKLTATLHSLDNQPSNKHLYYVEDREEANEILSCSSKG-LVASSETVPDSIKRKTIASYKELEARRSRVSELEKLYMDMTLQQELRK
        YILQK+QSEKRKIEKLTATLHSLDNQPSNKH+Y+ EDREEANEI S SSKG  VASSE VPDSIKRKTI+SYKELEARRSRVSELEKLYMDMTLQQEL K
Subjt:  YILQKMQSEKRKIEKLTATLHSLDNQPSNKHLYYVEDREEANEILSCSSKG-LVASSETVPDSIKRKTIASYKELEARRSRVSELEKLYMDMTLQQELRK

Query:  KGRKRKLREDELANPTSKPVYRWRAERKR
        KGRKRKLREDEL NPTSK VY+WRAERKR
Subjt:  KGRKRKLREDELANPTSKPVYRWRAERKR

SwissProt top hitse value%identityAlignment
Q55C50 Probable U3 small nucleolar RNA-associated protein 115.7e-2837.44Show/hide
Query:  SLKNAVPRRPYKERAQPHSRKKFGLLEKHKDYIERAKAFHKKEDTLRKLKEKAAFKNPDEFYFKMIRTRTVDGVHKPESHVNKYTAEQLMLMKTQDAGYI
        +L+  +P+R  +ER QP S KK G LE+ KDY+ERAK ++ K DTL+KLK +AAFKNPDEF +KMI ++ VDGVH  E        EQ++ +KTQD  Y+
Subjt:  SLKNAVPRRPYKERAQPHSRKKFGLLEKHKDYIERAKAFHKKEDTLRKLKEKAAFKNPDEFYFKMIRTRTVDGVHKPESHVNKYTAEQLMLMKTQDAGYI

Query:  LQKMQSEKRKIEKLTATLHSLDN--QPSNKHLYYVEDREEAN----------------------EILSCSSKGLVASSETVP--DSIKRKTIASYKELEA
          K +++ +KIE+L ATL  +D+  +P+ + +Y  +++E  N                      +I       LV + +T P    ++  T  SYKEL+ 
Subjt:  LQKMQSEKRKIEKLTATLHSLDN--QPSNKHLYYVEDREEAN----------------------EILSCSSKGLVASSETVP--DSIKRKTIASYKELEA

Query:  RRSRVSELEKLYMDMTLQQELRKKGRK
        R+ R  +L K  MD++  +   K+G K
Subjt:  RRSRVSELEKLYMDMTLQQELRKKGRK

Q8R5K5 Probable U3 small nucleolar RNA-associated protein 113.8e-2433.6Show/hide
Query:  RRPYKERAQPHSRKKFGLLEKHKDYIERAKAFHKKEDTLRKLKEKAAFKNPDEFYFKMIRTRTVDGVHKPESHVNKYTAEQLMLMKTQDAGYILQKMQSE
        +R Y+ER+QP  RK  GLLEK KDY  RA  + KK++ L+ L++KA  KNPDEFY+KM R +  DGVH  +    + T EQL LM+TQD  YI  K  +E
Subjt:  RRPYKERAQPHSRKKFGLLEKHKDYIERAKAFHKKEDTLRKLKEKAAFKNPDEFYFKMIRTRTVDGVHKPESHVNKYTAEQLMLMKTQDAGYILQKMQSE

Query:  KRKIEKLTATLHSLDNQ--PSNKHLYYVEDREEANEILSCSSKGLVASSETVPDSIKR------------------------KTIA-----SYKELEARR
         +KIE+L + LH LD Q    N+H+++ + ++E  +        + A  +T P+ + R                        K IA      Y  L  R 
Subjt:  KRKIEKLTATLHSLDNQ--PSNKHLYYVEDREEANEILSCSSKGLVASSETVPDSIKR------------------------KTIA-----SYKELEARR

Query:  SRVSELEKLYMDMTLQQELRKKGRKRKLREDELANPTSKPVYRWRAERKR
         R  +L  +   +  +++L  K +K K++++ + +P    +Y++++ RKR
Subjt:  SRVSELEKLYMDMTLQQELRKKGRKRKLREDELANPTSKPVYRWRAERKR

Q8S1Z1 Probable U3 small nucleolar RNA-associated protein 112.2e-8066.38Show/hide
Query:  MSSLKNAVPRRPYKERAQPHSRKKFGLLEKHKDYIERAKAFHKKEDTLRKLKEKAAFKNPDEFYFKMIRTRTVDGVHKPESHVNKYTAEQLMLMKTQDAG
        MSSL+NA+ RR +KERAQP SRKKFGLLEKHKDYI RAKAFH+KE+T+RKLKEKA+F+NPDEFYFKMI ++TVDG+H+P+   NKYT ++LML+KT+D G
Subjt:  MSSLKNAVPRRPYKERAQPHSRKKFGLLEKHKDYIERAKAFHKKEDTLRKLKEKAAFKNPDEFYFKMIRTRTVDGVHKPESHVNKYTAEQLMLMKTQDAG

Query:  YILQKMQSEKRKIEKLTATLHSLDNQPSNKHLYYVEDREEANEILS-CSSKGLVASSETVPDSIKRKTIASYKELEARRSRVSELEKLYMDMTLQQELRK
        YILQ +QSEK+KIEKL++ LH LDN+  NKH+Y+ EDREE  EI S    K      + +P  IKRKT +SY+ELE R+ RV +LEKLY DM LQ+EL+K
Subjt:  YILQKMQSEKRKIEKLTATLHSLDNQPSNKHLYYVEDREEANEILS-CSSKGLVASSETVPDSIKRKTIASYKELEARRSRVSELEKLYMDMTLQQELRK

Query:  KGRKRKLREDELANPTSKPVYRWRAERKR
         GRKRKLREDE+ N TS+PVY+WRA+RKR
Subjt:  KGRKRKLREDELANPTSKPVYRWRAERKR

Q9CZJ1 Probable U3 small nucleolar RNA-associated protein 111.5e-2535.25Show/hide
Query:  RRPYKERAQPHSRKKFGLLEKHKDYIERAKAFHKKEDTLRKLKEKAAFKNPDEFYFKMIRTRTVDGVHKPESHVNKYTAEQLMLMKTQDAGYILQKMQSE
        +R ++ER+QP  RK+ GLLEK KDY  RA  +HKK+D LR L++KA  KNPDEFY+KM R +  DGVH  + +  + TAEQL LM+TQD  YI  K  +E
Subjt:  RRPYKERAQPHSRKKFGLLEKHKDYIERAKAFHKKEDTLRKLKEKAAFKNPDEFYFKMIRTRTVDGVHKPESHVNKYTAEQLMLMKTQDAGYILQKMQSE

Query:  KRKIEKLTATLHSLDNQ--PSNKHLYYVEDREEANEI---------------------LSCSSKGLV--ASSETVPDSIKRKTIASYKELEARRSRVSEL
         +KIE+L + LH LD Q     KH+++ + ++E                         +    K  V  A+ +T    I ++    Y  L  R  R  +L
Subjt:  KRKIEKLTATLHSLDNQ--PSNKHLYYVEDREEANEI---------------------LSCSSKGLV--ASSETVPDSIKRKTIASYKELEARRSRVSEL

Query:  EKLYMDMTLQQELRKKGRKRKLREDELANPTSKPVYRWRAERKR
          +   +  +++L  K +K K++++ + +P    +YR++  RKR
Subjt:  EKLYMDMTLQQELRKKGRKRKLREDELANPTSKPVYRWRAERKR

Q9M223 Probable U3 small nucleolar RNA-associated protein 114.4e-7361.57Show/hide
Query:  MSSLKNAVPRRPYKERAQPHSRKKFGLLEKHKDYIERAKAFHKKEDTLRKLKEKAAFKNPDEFYFKMIRTRTVDGVHKPESHVNKYTAEQLMLMKTQDAG
        MSSL+NA+PR  +KER+QP +RK+FG+LEKHKDYI RA A+HKK++TL+ L++KAAFKNPDEF FKMI ++TVDG H+P+  VNKY+AE+LM+MKTQD G
Subjt:  MSSLKNAVPRRPYKERAQPHSRKKFGLLEKHKDYIERAKAFHKKEDTLRKLKEKAAFKNPDEFYFKMIRTRTVDGVHKPESHVNKYTAEQLMLMKTQDAG

Query:  YILQKMQSEKRKIEKLTATLHSLDNQPSNKHLYYVEDREEANEI-LSCSSKGLVASSETVPDSIKRKTIASYKELEARRSRVSELEKLYMDMTLQQELRK
        Y+ QK QSEK KI+KLTA+L    +Q S +H+YY EDREEA E+ +   SK  +++ E +P  IK+K   SY++LE R+SR  +LEKLY DM++Q+EL+K
Subjt:  YILQKMQSEKRKIEKLTATLHSLDNQPSNKHLYYVEDREEANEI-LSCSSKGLVASSETVPDSIKRKTIASYKELEARRSRVSELEKLYMDMTLQQELRK

Query:  KGRKRKLREDELANPTSKPVYRWRAERKR
        KGRKRKLR+DEL NP  K VY+WRA+RKR
Subjt:  KGRKRKLREDELANPTSKPVYRWRAERKR

Arabidopsis top hitse value%identityAlignment
AT3G60360.1 embryo sac development arrest 143.1e-7461.57Show/hide
Query:  MSSLKNAVPRRPYKERAQPHSRKKFGLLEKHKDYIERAKAFHKKEDTLRKLKEKAAFKNPDEFYFKMIRTRTVDGVHKPESHVNKYTAEQLMLMKTQDAG
        MSSL+NA+PR  +KER+QP +RK+FG+LEKHKDYI RA A+HKK++TL+ L++KAAFKNPDEF FKMI ++TVDG H+P+  VNKY+AE+LM+MKTQD G
Subjt:  MSSLKNAVPRRPYKERAQPHSRKKFGLLEKHKDYIERAKAFHKKEDTLRKLKEKAAFKNPDEFYFKMIRTRTVDGVHKPESHVNKYTAEQLMLMKTQDAG

Query:  YILQKMQSEKRKIEKLTATLHSLDNQPSNKHLYYVEDREEANEI-LSCSSKGLVASSETVPDSIKRKTIASYKELEARRSRVSELEKLYMDMTLQQELRK
        Y+ QK QSEK KI+KLTA+L    +Q S +H+YY EDREEA E+ +   SK  +++ E +P  IK+K   SY++LE R+SR  +LEKLY DM++Q+EL+K
Subjt:  YILQKMQSEKRKIEKLTATLHSLDNQPSNKHLYYVEDREEANEI-LSCSSKGLVASSETVPDSIKRKTIASYKELEARRSRVSELEKLYMDMTLQQELRK

Query:  KGRKRKLREDELANPTSKPVYRWRAERKR
        KGRKRKLR+DEL NP  K VY+WRA+RKR
Subjt:  KGRKRKLREDELANPTSKPVYRWRAERKR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGTCCCTAAAGAATGCGGTTCCTAGACGGCCTTACAAGGAGCGAGCTCAGCCGCATTCTCGGAAAAAATTTGGGCTTCTTGAGAAGCACAAAGATTATATCGAGCG
TGCTAAGGCTTTTCATAAGAAGGAAGATACTTTACGGAAACTTAAAGAGAAAGCAGCCTTCAAGAATCCAGATGAATTTTACTTTAAGATGATTAGGACGAGAACAGTTG
ATGGAGTTCATAAACCAGAGAGTCATGTAAATAAGTATACTGCAGAGCAACTCATGCTGATGAAGACCCAAGATGCAGGGTATATACTTCAGAAAATGCAGAGTGAGAAA
AGGAAAATTGAAAAACTGACGGCAACGTTGCATTCACTTGATAATCAACCATCAAATAAGCATCTTTACTATGTCGAAGACAGGGAGGAAGCCAATGAAATTCTATCTTG
TTCTTCTAAAGGATTGGTGGCATCTTCTGAGACAGTTCCTGATAGTATTAAAAGGAAAACCATTGCTTCTTACAAAGAATTGGAGGCAAGGAGGAGTAGAGTCAGTGAAT
TAGAGAAACTTTATATGGATATGACACTGCAACAAGAATTAAGGAAAAAGGGTCGCAAACGTAAACTCCGGGAAGATGAACTTGCCAATCCGACTTCAAAACCTGTATAT
AGATGGCGGGCAGAACGGAAGCGCTAA
mRNA sequenceShow/hide mRNA sequence
ATGTCGTCCCTAAAGAATGCGGTTCCTAGACGGCCTTACAAGGAGCGAGCTCAGCCGCATTCTCGGAAAAAATTTGGGCTTCTTGAGAAGCACAAAGATTATATCGAGCG
TGCTAAGGCTTTTCATAAGAAGGAAGATACTTTACGGAAACTTAAAGAGAAAGCAGCCTTCAAGAATCCAGATGAATTTTACTTTAAGATGATTAGGACGAGAACAGTTG
ATGGAGTTCATAAACCAGAGAGTCATGTAAATAAGTATACTGCAGAGCAACTCATGCTGATGAAGACCCAAGATGCAGGGTATATACTTCAGAAAATGCAGAGTGAGAAA
AGGAAAATTGAAAAACTGACGGCAACGTTGCATTCACTTGATAATCAACCATCAAATAAGCATCTTTACTATGTCGAAGACAGGGAGGAAGCCAATGAAATTCTATCTTG
TTCTTCTAAAGGATTGGTGGCATCTTCTGAGACAGTTCCTGATAGTATTAAAAGGAAAACCATTGCTTCTTACAAAGAATTGGAGGCAAGGAGGAGTAGAGTCAGTGAAT
TAGAGAAACTTTATATGGATATGACACTGCAACAAGAATTAAGGAAAAAGGGTCGCAAACGTAAACTCCGGGAAGATGAACTTGCCAATCCGACTTCAAAACCTGTATAT
AGATGGCGGGCAGAACGGAAGCGCTAA
Protein sequenceShow/hide protein sequence
MSSLKNAVPRRPYKERAQPHSRKKFGLLEKHKDYIERAKAFHKKEDTLRKLKEKAAFKNPDEFYFKMIRTRTVDGVHKPESHVNKYTAEQLMLMKTQDAGYILQKMQSEK
RKIEKLTATLHSLDNQPSNKHLYYVEDREEANEILSCSSKGLVASSETVPDSIKRKTIASYKELEARRSRVSELEKLYMDMTLQQELRKKGRKRKLREDELANPTSKPVY
RWRAERKR