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HG10006109 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10006109
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionHAD hydrolase, subfamily IA
Genome locationChr07:13831963..13832151
RNA-Seq ExpressionHG10006109
SyntenyHG10006109
Gene Ontology termsNA
InterPro domainsIPR006439 - HAD hydrolase, subfamily IA
IPR023214 - HAD superfamily
IPR036412 - HAD-like superfamily
IPR041492 - Haloacid dehalogenase-like hydrolase


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN61249.1 hypothetical protein Csa_006768 [Cucumis sativus]2.9e-0890.32Show/hide
Query:  SGKRKPDPEFYLEALRHLKVEPASCIFIDDR
        +GKRKPDPEFYLEALRHLKVEPA+CIF+DDR
Subjt:  SGKRKPDPEFYLEALRHLKVEPASCIFIDDR
XP_008441879.1 PREDICTED: uncharacterized protein LOC103485900 isoform X1 [Cucumis melo]2.9e-0890.32Show/hide
Query:  SGKRKPDPEFYLEALRHLKVEPASCIFIDDR
        +GKRKPDPEFYLEALRHLKVEPA+CIF+DDR
Subjt:  SGKRKPDPEFYLEALRHLKVEPASCIFIDDR
XP_008463344.1 PREDICTED: uncharacterized protein LOC103501525 [Cucumis melo]5.9e-0990.62Show/hide
Query:  SGKRKPDPEFYLEALRHLKVEPASCIFIDDRF
        +GKRKPDPEFYLEALRHLKVEPA+CIF+DDRF
Subjt:  SGKRKPDPEFYLEALRHLKVEPASCIFIDDRF
XP_031737125.1 LOW QUALITY PROTEIN: flavin mononucleotide hydrolase 1, chloroplatic [Cucumis sativus]2.9e-0890.32Show/hide
Query:  SGKRKPDPEFYLEALRHLKVEPASCIFIDDR
        +GKRKPDPEFYLEALRHLKVEPA+CIF+DDR
Subjt:  SGKRKPDPEFYLEALRHLKVEPASCIFIDDR
XP_038889795.1 flavin mononucleotide hydrolase 1, chloroplatic [Benincasa hispida]1.3e-0893.55Show/hide
Query:  SGKRKPDPEFYLEALRHLKVEPASCIFIDDR
        +GKRKPDPEFYLEALRHLKVEPASCIF+DDR
Subjt:  SGKRKPDPEFYLEALRHLKVEPASCIFIDDR
TrEMBL top hitse value%identityAlignment
A0A0A0LJI0 Uncharacterized protein1.4e-0890.32Show/hide
Query:  SGKRKPDPEFYLEALRHLKVEPASCIFIDDR
        +GKRKPDPEFYLEALRHLKVEPA+CIF+DDR
Subjt:  SGKRKPDPEFYLEALRHLKVEPASCIFIDDR
A0A1S3B4F3 uncharacterized protein LOC103485900 isoform X11.4e-0890.32Show/hide
Query:  SGKRKPDPEFYLEALRHLKVEPASCIFIDDR
        +GKRKPDPEFYLEALRHLKVEPA+CIF+DDR
Subjt:  SGKRKPDPEFYLEALRHLKVEPASCIFIDDR
A0A1S3CJE8 uncharacterized protein LOC1035015252.8e-0990.62Show/hide
Query:  SGKRKPDPEFYLEALRHLKVEPASCIFIDDRF
        +GKRKPDPEFYLEALRHLKVEPA+CIF+DDRF
Subjt:  SGKRKPDPEFYLEALRHLKVEPASCIFIDDRF
A0A5C7GVU0 Uncharacterized protein1.8e-0887.5Show/hide
Query:  VSGKRKPDPEFYLEALRHLKVEPASCIFIDDR
        VSGKRKPDP+FYLEA+RHLKV+PA CIFIDDR
Subjt:  VSGKRKPDPEFYLEALRHLKVEPASCIFIDDR
A0A6J1HR46 flavin mononucleotide hydrolase 1, chloroplatic3.1e-0890.32Show/hide
Query:  SGKRKPDPEFYLEALRHLKVEPASCIFIDDR
        +GKRKPDP+FYLEALRHL+VEPASCIFIDDR
Subjt:  SGKRKPDPEFYLEALRHLKVEPASCIFIDDR
SwissProt top hitse value%identityAlignment
Q84VZ1 Flavin mononucleotide hydrolase 1, chloroplatic1.0e-0875Show/hide
Query:  VSGKRKPDPEFYLEALRHLKVEPASCIFIDDR
        ++GKRKPDPEFYLE + HL VEP  CIFIDDR
Subjt:  VSGKRKPDPEFYLEALRHLKVEPASCIFIDDR
Arabidopsis top hitse value%identityAlignment
AT1G79790.1 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein7.4e-1075Show/hide
Query:  VSGKRKPDPEFYLEALRHLKVEPASCIFIDDR
        ++GKRKPDPEFYLE + HL VEP  CIFIDDR
Subjt:  VSGKRKPDPEFYLEALRHLKVEPASCIFIDDR
AT1G79790.2 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein7.4e-1075Show/hide
Query:  VSGKRKPDPEFYLEALRHLKVEPASCIFIDDR
        ++GKRKPDPEFYLE + HL VEP  CIFIDDR
Subjt:  VSGKRKPDPEFYLEALRHLKVEPASCIFIDDR

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCAATATTCAGAGATGTCAAAAAAGTAGCCAAGTTGGATATGTGTTGCCTTTTTCATTGTGTTGAATCCTGTTTGCCATATGTTTCAGGAAAGAGGAAGCCAGATCC
GGAGTTCTACTTAGAAGCCTTGAGACATCTCAAAGTTGAACCAGCTAGCTGTATTTTCATTGATGACAGGTTCGATTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCAATATTCAGAGATGTCAAAAAAGTAGCCAAGTTGGATATGTGTTGCCTTTTTCATTGTGTTGAATCCTGTTTGCCATATGTTTCAGGAAAGAGGAAGCCAGATCC
GGAGTTCTACTTAGAAGCCTTGAGACATCTCAAAGTTGAACCAGCTAGCTGTATTTTCATTGATGACAGGTTCGATTGA
Protein sequenceShow/hide protein sequence
MSIFRDVKKVAKLDMCCLFHCVESCLPYVSGKRKPDPEFYLEALRHLKVEPASCIFIDDRFD