CuGenDBv2

Gene ID	HG10006172
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	EAF domain-containing protein
Genome location	Chr07:15191572..15192645
RNA-Seq Expression	HG10006172
Synteny	HG10006172
Gene Ontology terms	GO:0034243 - regulation of transcription elongation from RNA polymerase II promoter (biological process) GO:0045893 - positive regulation of transcription, DNA-templated (biological process) GO:0032783 - ELL-EAF complex (cellular component) GO:0003711 - transcription elongation regulator activity (molecular function)
InterPro domains	IPR019194 - Transcription elongation factor Eaf, N-terminal IPR027093 - EAF family

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6579241.1 Ell-associated factor Eaf, partial [Cucurbita argyrosperma subsp. sororia]

8.6e-134

77.87

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Query:  MANNNKEELKTAPQPDRWYNLSLGPSFKDESSNKFCTLRYEFKPASIDKKKLGSLKKTKENRVTIEFKNDQFGKPNVGFVGSSEDYKENDAVLFFDEETF
        MANNNKEE KTAPQPDRWY+LSLGPSF +ESSNKFCTLRYEFKPASIDK K GSLKKTKENRVTIEF+N+Q GKPNV FVGSSEDYKENDAVLFFD ETF
Subjt:  MANNNKEELKTAPQPDRWYNLSLGPSFKDESSNKFCTLRYEFKPASIDKKKLGSLKKTKENRVTIEFKNDQFGKPNVGFVGSSEDYKENDAVLFFDEETF

Query:  RLERLHWT---------PGESSAAATATTITTTAGMAAPAATSTTASVLHSLTPLEPRLSPPVAKVAKPMHMGRGSFSTMPVEVERKDIGELGNTGAKSG
        RLERLH           PGESSAAA A             A+ST+AS +HSLTP EPRLSPP AKV KPMHMGRGSF ++ VEVE+ DIGE GNTGAK  
Subjt:  RLERLHWT---------PGESSAAATATTITTTAGMAAPAATSTTASVLHSLTPLEPRLSPPVAKVAKPMHMGRGSFSTMPVEVERKDIGELGNTGAKSG

Query:  VASKGITDYSSDPPNVSASSPGLKYDDEHQDIHIDDIFGFVLSNDGNNAEEERVETGFDINIPHQNDTDDEVANVDDSSDEAEKGPNAAEALRAQVNAEG
        VASKG  DYSSDPPNVSA SPG K DDEHQDI IDDIFG V S+D NNAEE++V+ GFDIN+PH NDTDDE+A+VDDS DEAEKGPNAAEALRAQVNAEG
Subjt:  VASKGITDYSSDPPNVSASSPGLKYDDEHQDIHIDDIFGFVLSNDGNNAEEERVETGFDINIPHQNDTDDEVANVDDSSDEAEKGPNAAEALRAQVNAEG

Query:  REGPTTAAALKAQVNAEGRDNQSSSSSISGSGSGSSSGSSSDNSDSEGSDEDSVTSI
        REGPT AAAL+AQVNAEGRD QSSSSS S SGSGSSSGSSS +SDSEG+DEDSVTSI
Subjt:  REGPTTAAALKAQVNAEGRDNQSSSSSISGSGSGSSSGSSSDNSDSEGSDEDSVTSI

XP_008454810.1 PREDICTED: ELL-associated factor 2 [Cucumis melo]

2.8e-132

78.21

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Query:  MANNNKEELKTAPQPDRWYNLSLGPSFKDESSNKFCTLRYEFKPASIDKKKLGSLKKTKENRVTIEFKNDQFGKPNVGFVGSSEDYKENDAVLFFDEETF
        MANN  EE KTAPQPDRWYNLSLGPSFKDESSNKFCT RYEFKPASIDK K G LKKTKENRVT+EF+N Q GKPN+ F+GSSEDYK+NDAVLFFD ETF
Subjt:  MANNNKEELKTAPQPDRWYNLSLGPSFKDESSNKFCTLRYEFKPASIDKKKLGSLKKTKENRVTIEFKNDQFGKPNVGFVGSSEDYKENDAVLFFDEETF

Query:  RLERLHWT---------PGES-SAAATATTITTTAGMAAPAATSTTASVLHSLTPLEPRLSPPVAKVAKPMHMGRGSFSTMPVEVERKDIGELGNTGAKS
        RLERLH           PGES +AAATAT  TTTAG+AAPAAT ++ASVLHSLTP EPRLSPPV KVAKPMHMGR SF TMPVEVER DIGE GN GAK 
Subjt:  RLERLHWT---------PGES-SAAATATTITTTAGMAAPAATSTTASVLHSLTPLEPRLSPPVAKVAKPMHMGRGSFSTMPVEVERKDIGELGNTGAKS

Query:  GVASKGITDYSSDPPNVSASSPGLKYDDEHQDIHIDDIFGFVLSNDGNNAEEERVETGFDINIPHQNDTDDEVANVDDSSDEAEKGPNAAEALRAQVNAE
         VASKG+TDYSSDPPN S SSPGLK DDEHQDI IDDIFG V S+DGNNAEEERVETGFDINIPHQNDTDDE+A+VDDS DEAEKGPNAAEALRAQVNAE
Subjt:  GVASKGITDYSSDPPNVSASSPGLKYDDEHQDIHIDDIFGFVLSNDGNNAEEERVETGFDINIPHQNDTDDEVANVDDSSDEAEKGPNAAEALRAQVNAE

Query:  GREGPTTAAALKAQVNAEGRDNQSSSSSISGSGSGSSSGSSSDNSDSEGSDEDSVTSI
        GR                    QSSSSS SGSGSGSSSGSSS +SDSEGSDEDSVTSI
Subjt:  GREGPTTAAALKAQVNAEGRDNQSSSSSISGSGSGSSSGSSSDNSDSEGSDEDSVTSI

XP_022939831.1 ELL-associated factor 1 [Cucurbita moschata]

1.7e-134

78.43

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Query:  MANNNKEELKTAPQPDRWYNLSLGPSFKDESSNKFCTLRYEFKPASIDKKKLGSLKKTKENRVTIEFKNDQFGKPNVGFVGSSEDYKENDAVLFFDEETF
        MANNNKEE KTAPQPDRWY+LSLGPSF +ESSNKFCTLRYEFKPASIDK K GSLKKTKENRVTIEF+N+Q GKPNV FVGSSEDYKENDAVLFFD ETF
Subjt:  MANNNKEELKTAPQPDRWYNLSLGPSFKDESSNKFCTLRYEFKPASIDKKKLGSLKKTKENRVTIEFKNDQFGKPNVGFVGSSEDYKENDAVLFFDEETF

Query:  RLERLHWT---------PGESSAAATATTITTTAGMAAPAATSTTASVLHSLTPLEPRLSPPVAKVAKPMHMGRGSFSTMPVEVERKDIGELGNTGAKSG
        RLERLH           PGESSAAA A            AA+ST+AS LHSLTP EPRLSPP AKV KPMHMGRGSF ++ VEVE+ DIGE GNTGAK  
Subjt:  RLERLHWT---------PGESSAAATATTITTTAGMAAPAATSTTASVLHSLTPLEPRLSPPVAKVAKPMHMGRGSFSTMPVEVERKDIGELGNTGAKSG

Query:  VASKGITDYSSDPPNVSASSPGLKYDDEHQDIHIDDIFGFVLSNDGNNAEEERVETGFDINIPHQNDTDDEVANVDDSSDEAEKGPNAAEALRAQVNAEG
        VASKG  DYSSDPPNVSA SPG K DDEHQDI IDDIFG V S+D NNAEE++V+ GFDIN+PH NDTDDE+A+VDDS DEAEKGPNAAEALRAQVNAEG
Subjt:  VASKGITDYSSDPPNVSASSPGLKYDDEHQDIHIDDIFGFVLSNDGNNAEEERVETGFDINIPHQNDTDDEVANVDDSSDEAEKGPNAAEALRAQVNAEG

Query:  REGPTTAAALKAQVNAEGRDNQSSSSSISGSGSGSSSGSSSDNSDSEGSDEDSVTSI
        REGPT AAAL+AQVNAEGRD QSSSSS S SGSGSSSGSSS +SDSEG+DEDSVTSI
Subjt:  REGPTTAAALKAQVNAEGRDNQSSSSSISGSGSGSSSGSSSDNSDSEGSDEDSVTSI

XP_022993461.1 ELL-associated factor 1 [Cucurbita maxima]

1.3e-134

78.43

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Query:  MANNNKEELKTAPQPDRWYNLSLGPSFKDESSNKFCTLRYEFKPASIDKKKLGSLKKTKENRVTIEFKNDQFGKPNVGFVGSSEDYKENDAVLFFDEETF
        MANNNKEE KTAPQPDRWY+LSLGPSF +ESSNKFCTLRYEFKPASIDK K GSLKKTKENRVTIEF+N+Q GKPNV FVGSSEDYKENDAVLFFD ETF
Subjt:  MANNNKEELKTAPQPDRWYNLSLGPSFKDESSNKFCTLRYEFKPASIDKKKLGSLKKTKENRVTIEFKNDQFGKPNVGFVGSSEDYKENDAVLFFDEETF

Query:  RLERLHWT---------PGESSAAATATTITTTAGMAAPAATSTTASVLHSLTPLEPRLSPPVAKVAKPMHMGRGSFSTMPVEVERKDIGELGNTGAKSG
        RLERLH           PGESSAA  A            AA+ST+AS LHSLTP EPRLSPP AKV KPMHMGRGSF ++ VEVE+ DIGE GNTGAKS 
Subjt:  RLERLHWT---------PGESSAAATATTITTTAGMAAPAATSTTASVLHSLTPLEPRLSPPVAKVAKPMHMGRGSFSTMPVEVERKDIGELGNTGAKSG

Query:  VASKGITDYSSDPPNVSASSPGLKYDDEHQDIHIDDIFGFVLSNDGNNAEEERVETGFDINIPHQNDTDDEVANVDDSSDEAEKGPNAAEALRAQVNAEG
        VASKG  DYSSDPPNVSA SPG K DDEHQDI IDDIFG V S+D NNAEE++V+ GFDIN+PH NDTDDE+A+VDDS DEAEKGPNAAEALRAQVNAEG
Subjt:  VASKGITDYSSDPPNVSASSPGLKYDDEHQDIHIDDIFGFVLSNDGNNAEEERVETGFDINIPHQNDTDDEVANVDDSSDEAEKGPNAAEALRAQVNAEG

Query:  REGPTTAAALKAQVNAEGRDNQSSSSSISGSGSGSSSGSSSDNSDSEGSDEDSVTSI
        REGPT AAAL+AQVNAEGRD QSSSSS S SGSGSSSGSSS +SDSEG+DEDSVTSI
Subjt:  REGPTTAAALKAQVNAEGRDNQSSSSSISGSGSGSSSGSSSDNSDSEGSDEDSVTSI

XP_038893321.1 ELL-associated factor 2-like [Benincasa hispida]

1.5e-149

85.24

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Query:  MANNNKEELKTAPQPDRWYNLSLGPSFKDESSNKFCTLRYEFKPASIDKKKLGSLKKTKENRVTIEFKNDQFGKPNVGFVGSSEDYKENDAVLFFDEETF
        MANNNKEE KTAPQPDRWYNLSLGPSFKDESSNKFCTLRYEFKPASIDK K GSLKKTKENRVT+EF+N+QFGKPNV FVGSSEDYKENDAVLFFD ETF
Subjt:  MANNNKEELKTAPQPDRWYNLSLGPSFKDESSNKFCTLRYEFKPASIDKKKLGSLKKTKENRVTIEFKNDQFGKPNVGFVGSSEDYKENDAVLFFDEETF

Query:  RLERLHWT---------PGESSAAATATTITTTAGMAAPAATSTT--ASVLHSLTPLEPRLSPPVAKVAKPMHMGRGSFSTMPVEVERKDIGELGNTGAK
        RLERLH           PGES+AAA A   TTT G+AAPA TST+  AS LHSLTP EPRLSPPVAKVAKPMHMGRGSF TMPVEVER DIGE GNTGAK
Subjt:  RLERLHWT---------PGESSAAATATTITTTAGMAAPAATSTT--ASVLHSLTPLEPRLSPPVAKVAKPMHMGRGSFSTMPVEVERKDIGELGNTGAK

Query:  SGVASKGITDYSSDPPNVSASSPGLKYDDEHQDIHIDDIFGFVLSNDGNNAEEERVETGFDINIPHQNDTDDEVANVDDSSDEAEKGPNAAEALRAQVNA
        S VASKG+ DYSSDPPNVSASSPGLK DDEHQDI IDD+FG VLS+DGNNAEEERVETGFDINIPHQNDTDDE+A+VDDS DEAEKGPNAAEALRAQVNA
Subjt:  SGVASKGITDYSSDPPNVSASSPGLKYDDEHQDIHIDDIFGFVLSNDGNNAEEERVETGFDINIPHQNDTDDEVANVDDSSDEAEKGPNAAEALRAQVNA

Query:  EGREGPTTAAALKAQVNAEGRDNQSSSSSISGSGSGSSSGSSSDNSDSEGSDEDSVTSI
        EGREGPT AAAL+AQV+AEGRD+QSSSSS SGSGSGSSSGSSS +SDSEGSDEDSVTSI
Subjt:  EGREGPTTAAALKAQVNAEGRDNQSSSSSISGSGSGSSSGSSSDNSDSEGSDEDSVTSI

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KM56 EAF domain-containing protein

1.2e-128

77.31

Show/hide

Query:  MANNNKEELKTAPQPDRWYNLSLGPSFKDESSNKFCTLRYEFKPASIDKKKLGSLKKTKENRVTIEFKNDQFGKPNVGFVGSSEDYKENDAVLFFDEETF
        MANN  EE KTAPQPDRWYNLSLGPSFKDESSNKFCT RYEFKPASIDK K G LKKTKENRVT+EF+N Q GKPN+ FVGSSEDYKENDAVLFFD ETF
Subjt:  MANNNKEELKTAPQPDRWYNLSLGPSFKDESSNKFCTLRYEFKPASIDKKKLGSLKKTKENRVTIEFKNDQFGKPNVGFVGSSEDYKENDAVLFFDEETF

Query:  RLERLHWT---------PGESSAAATATTITTTAGMAAPAATSTTASVLHSLTPLEPRLSPPVAKVAKPMHMGRGSFSTMPVEVERKDIGELGNTGAKSG
        RLERLH           PGES+AA  A    TTAG+AAPAA  TTASVLHSLTP EPRLSPPV KV+KPMHMGR SF TMPVEVER DIGE GN GAK+ 
Subjt:  RLERLHWT---------PGESSAAATATTITTTAGMAAPAATSTTASVLHSLTPLEPRLSPPVAKVAKPMHMGRGSFSTMPVEVERKDIGELGNTGAKSG

Query:  VASKGITDYSSDPPNVSASSPGLKYDDEHQDIHIDDIFGFVLSNDGNNAEEERVETGFDINIPHQNDTDDEVANVDDSSDEAEKGPNAAEALRAQVNAEG
        VASKG+T+YSSDPPNVS SSPGLK DDEHQDI IDDIFG V S+DGNNAEEERVE GFDINIPHQNDTDDE+A+VDDS DEAEKGPNAAEALRAQVNAEG
Subjt:  VASKGITDYSSDPPNVSASSPGLKYDDEHQDIHIDDIFGFVLSNDGNNAEEERVETGFDINIPHQNDTDDEVANVDDSSDEAEKGPNAAEALRAQVNAEG

Query:  REGPTTAAALKAQVNAEGRDNQSSSSSISGSGSGSSSGSSSDNSDSEGSDEDSVTSI
        R                    QSSSSS SGSGSGSSSGSSS +SDSE SDEDSVTSI
Subjt:  REGPTTAAALKAQVNAEGRDNQSSSSSISGSGSGSSSGSSSDNSDSEGSDEDSVTSI

A0A1S3C0N3 ELL-associated factor 2

1.3e-132

78.21

Show/hide

Query:  MANNNKEELKTAPQPDRWYNLSLGPSFKDESSNKFCTLRYEFKPASIDKKKLGSLKKTKENRVTIEFKNDQFGKPNVGFVGSSEDYKENDAVLFFDEETF
        MANN  EE KTAPQPDRWYNLSLGPSFKDESSNKFCT RYEFKPASIDK K G LKKTKENRVT+EF+N Q GKPN+ F+GSSEDYK+NDAVLFFD ETF
Subjt:  MANNNKEELKTAPQPDRWYNLSLGPSFKDESSNKFCTLRYEFKPASIDKKKLGSLKKTKENRVTIEFKNDQFGKPNVGFVGSSEDYKENDAVLFFDEETF

Query:  RLERLHWT---------PGES-SAAATATTITTTAGMAAPAATSTTASVLHSLTPLEPRLSPPVAKVAKPMHMGRGSFSTMPVEVERKDIGELGNTGAKS
        RLERLH           PGES +AAATAT  TTTAG+AAPAAT ++ASVLHSLTP EPRLSPPV KVAKPMHMGR SF TMPVEVER DIGE GN GAK 
Subjt:  RLERLHWT---------PGES-SAAATATTITTTAGMAAPAATSTTASVLHSLTPLEPRLSPPVAKVAKPMHMGRGSFSTMPVEVERKDIGELGNTGAKS

Query:  GVASKGITDYSSDPPNVSASSPGLKYDDEHQDIHIDDIFGFVLSNDGNNAEEERVETGFDINIPHQNDTDDEVANVDDSSDEAEKGPNAAEALRAQVNAE
         VASKG+TDYSSDPPN S SSPGLK DDEHQDI IDDIFG V S+DGNNAEEERVETGFDINIPHQNDTDDE+A+VDDS DEAEKGPNAAEALRAQVNAE
Subjt:  GVASKGITDYSSDPPNVSASSPGLKYDDEHQDIHIDDIFGFVLSNDGNNAEEERVETGFDINIPHQNDTDDEVANVDDSSDEAEKGPNAAEALRAQVNAE

Query:  GREGPTTAAALKAQVNAEGRDNQSSSSSISGSGSGSSSGSSSDNSDSEGSDEDSVTSI
        GR                    QSSSSS SGSGSGSSSGSSS +SDSEGSDEDSVTSI
Subjt:  GREGPTTAAALKAQVNAEGRDNQSSSSSISGSGSGSSSGSSSDNSDSEGSDEDSVTSI

A0A5A7T0X1 ELL-associated factor 2

5.1e-116

71.55

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Query:  MANNNKEELKTAPQPDRWYNLSLGPSFKDESSNKFCTLRYEFKPASIDKKKLGSLKKTKENRVTIEFKNDQFGKPNVGFVGSSEDYKENDAVLFFDEETF
        MANN  EE KTAPQPDRWYNLSLGPSFKDESSNKFCT RYEFKPASIDK K G LKKTKENRVT+EF+N Q GKPN+ F+GSSEDYK+NDAVLFFD ETF
Subjt:  MANNNKEELKTAPQPDRWYNLSLGPSFKDESSNKFCTLRYEFKPASIDKKKLGSLKKTKENRVTIEFKNDQFGKPNVGFVGSSEDYKENDAVLFFDEETF

Query:  RLERLHWTPGESSAAATATTITTTAGMAAPAATSTTASVLHSLTPLEPRLSPPVAKVAKPMHMGRGSFSTMPVEVERKDIGELGNTGAKSGVASKGITDY
        RLERLH                                         PRLSPPV KVAKPMHMGR SF TMPVEVER DIGE GN GAK  VASKG+TDY
Subjt:  RLERLHWTPGESSAAATATTITTTAGMAAPAATSTTASVLHSLTPLEPRLSPPVAKVAKPMHMGRGSFSTMPVEVERKDIGELGNTGAKSGVASKGITDY

Query:  SSDPPNVSASSPGLKYDDEHQDIHIDDIFGFVLSNDGNNAEEERVETGFDINIPHQNDTDDEVANVDDSSDEAEKGPNAAEALRAQVNAEGREGPTTAAA
        SSDPPN S SSPGLK DDEHQDI IDDIFG V S+DGNNAEEERVETGFDINIPHQNDTDDE+A+VDDS DEAEKGPNAAEALRAQVNAEGR        
Subjt:  SSDPPNVSASSPGLKYDDEHQDIHIDDIFGFVLSNDGNNAEEERVETGFDINIPHQNDTDDEVANVDDSSDEAEKGPNAAEALRAQVNAEGREGPTTAAA

Query:  LKAQVNAEGRDNQSSSSSISGSGSGSSSGSSSDNSDSEGSDEDSVTSI
                    QSSSSS SGSGSGSSSGSSS +SDSEGSDEDSVTSI
Subjt:  LKAQVNAEGRDNQSSSSSISGSGSGSSSGSSSDNSDSEGSDEDSVTSI

A0A6J1FGX9 ELL-associated factor 1

8.4e-135

78.43

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Query:  MANNNKEELKTAPQPDRWYNLSLGPSFKDESSNKFCTLRYEFKPASIDKKKLGSLKKTKENRVTIEFKNDQFGKPNVGFVGSSEDYKENDAVLFFDEETF
        MANNNKEE KTAPQPDRWY+LSLGPSF +ESSNKFCTLRYEFKPASIDK K GSLKKTKENRVTIEF+N+Q GKPNV FVGSSEDYKENDAVLFFD ETF
Subjt:  MANNNKEELKTAPQPDRWYNLSLGPSFKDESSNKFCTLRYEFKPASIDKKKLGSLKKTKENRVTIEFKNDQFGKPNVGFVGSSEDYKENDAVLFFDEETF

Query:  RLERLHWT---------PGESSAAATATTITTTAGMAAPAATSTTASVLHSLTPLEPRLSPPVAKVAKPMHMGRGSFSTMPVEVERKDIGELGNTGAKSG
        RLERLH           PGESSAAA A            AA+ST+AS LHSLTP EPRLSPP AKV KPMHMGRGSF ++ VEVE+ DIGE GNTGAK  
Subjt:  RLERLHWT---------PGESSAAATATTITTTAGMAAPAATSTTASVLHSLTPLEPRLSPPVAKVAKPMHMGRGSFSTMPVEVERKDIGELGNTGAKSG

Query:  VASKGITDYSSDPPNVSASSPGLKYDDEHQDIHIDDIFGFVLSNDGNNAEEERVETGFDINIPHQNDTDDEVANVDDSSDEAEKGPNAAEALRAQVNAEG
        VASKG  DYSSDPPNVSA SPG K DDEHQDI IDDIFG V S+D NNAEE++V+ GFDIN+PH NDTDDE+A+VDDS DEAEKGPNAAEALRAQVNAEG
Subjt:  VASKGITDYSSDPPNVSASSPGLKYDDEHQDIHIDDIFGFVLSNDGNNAEEERVETGFDINIPHQNDTDDEVANVDDSSDEAEKGPNAAEALRAQVNAEG

Query:  REGPTTAAALKAQVNAEGRDNQSSSSSISGSGSGSSSGSSSDNSDSEGSDEDSVTSI
        REGPT AAAL+AQVNAEGRD QSSSSS S SGSGSSSGSSS +SDSEG+DEDSVTSI
Subjt:  REGPTTAAALKAQVNAEGRDNQSSSSSISGSGSGSSSGSSSDNSDSEGSDEDSVTSI

A0A6J1JWD6 ELL-associated factor 1

6.5e-135

78.43

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Query:  MANNNKEELKTAPQPDRWYNLSLGPSFKDESSNKFCTLRYEFKPASIDKKKLGSLKKTKENRVTIEFKNDQFGKPNVGFVGSSEDYKENDAVLFFDEETF
        MANNNKEE KTAPQPDRWY+LSLGPSF +ESSNKFCTLRYEFKPASIDK K GSLKKTKENRVTIEF+N+Q GKPNV FVGSSEDYKENDAVLFFD ETF
Subjt:  MANNNKEELKTAPQPDRWYNLSLGPSFKDESSNKFCTLRYEFKPASIDKKKLGSLKKTKENRVTIEFKNDQFGKPNVGFVGSSEDYKENDAVLFFDEETF

Query:  RLERLHWT---------PGESSAAATATTITTTAGMAAPAATSTTASVLHSLTPLEPRLSPPVAKVAKPMHMGRGSFSTMPVEVERKDIGELGNTGAKSG
        RLERLH           PGESSAA  A            AA+ST+AS LHSLTP EPRLSPP AKV KPMHMGRGSF ++ VEVE+ DIGE GNTGAKS 
Subjt:  RLERLHWT---------PGESSAAATATTITTTAGMAAPAATSTTASVLHSLTPLEPRLSPPVAKVAKPMHMGRGSFSTMPVEVERKDIGELGNTGAKSG

Query:  VASKGITDYSSDPPNVSASSPGLKYDDEHQDIHIDDIFGFVLSNDGNNAEEERVETGFDINIPHQNDTDDEVANVDDSSDEAEKGPNAAEALRAQVNAEG
        VASKG  DYSSDPPNVSA SPG K DDEHQDI IDDIFG V S+D NNAEE++V+ GFDIN+PH NDTDDE+A+VDDS DEAEKGPNAAEALRAQVNAEG
Subjt:  VASKGITDYSSDPPNVSASSPGLKYDDEHQDIHIDDIFGFVLSNDGNNAEEERVETGFDINIPHQNDTDDEVANVDDSSDEAEKGPNAAEALRAQVNAEG

Query:  REGPTTAAALKAQVNAEGRDNQSSSSSISGSGSGSSSGSSSDNSDSEGSDEDSVTSI
        REGPT AAAL+AQVNAEGRD QSSSSS S SGSGSSSGSSS +SDSEG+DEDSVTSI
Subjt:  REGPTTAAALKAQVNAEGRDNQSSSSSISGSGSGSSSGSSSDNSDSEGSDEDSVTSI

SwissProt top hits

e value

%identity

Alignment

B3NA01 Ell-associated factor Eaf

1.0e-04

32.1

Show/hide

Query:  LSLGPSFKDE-SSNKFCTLRYEFKPASIDKKKLGSLKKTKENRVTIEFKN-DQFGKPNVGFVGSSEDYKENDAVLFFDEET
        L LG +F  + +S  F T++Y+FKPAS+D  ++ S+     N+VT+   N +  G P+  + G+  +Y + + ++ +D+ET
Subjt:  LSLGPSFKDE-SSNKFCTLRYEFKPASIDKKKLGSLKKTKENRVTIEFKN-DQFGKPNVGFVGSSEDYKENDAVLFFDEET

B4HQT6 Ell-associated factor Eaf

1.0e-04

32.1

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Query:  LSLGPSFKDE-SSNKFCTLRYEFKPASIDKKKLGSLKKTKENRVTIEFKN-DQFGKPNVGFVGSSEDYKENDAVLFFDEET
        L LG +F  + +S  F T++Y+FKPAS+D  ++ S+     N+VT+   N +  G P+  + G+  +Y + + ++ +D+ET
Subjt:  LSLGPSFKDE-SSNKFCTLRYEFKPASIDKKKLGSLKKTKENRVTIEFKN-DQFGKPNVGFVGSSEDYKENDAVLFFDEET

B4P1N5 Ell-associated factor Eaf

1.0e-04

32.1

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Query:  LSLGPSFKDE-SSNKFCTLRYEFKPASIDKKKLGSLKKTKENRVTIEFKN-DQFGKPNVGFVGSSEDYKENDAVLFFDEET
        L LG +F  + +S  F T++Y+FKPAS+D  ++ S+     N+VT+   N +  G P+  + G+  +Y + + ++ +D+ET
Subjt:  LSLGPSFKDE-SSNKFCTLRYEFKPASIDKKKLGSLKKTKENRVTIEFKN-DQFGKPNVGFVGSSEDYKENDAVLFFDEET

Q7JRJ1 Ell-associated factor Eaf

1.0e-04

32.1

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Query:  LSLGPSFKDE-SSNKFCTLRYEFKPASIDKKKLGSLKKTKENRVTIEFKN-DQFGKPNVGFVGSSEDYKENDAVLFFDEET
        L LG +F  + +S  F T++Y+FKPAS+D  ++ S+     N+VT+   N +  G P+  + G+  +Y + + ++ +D+ET
Subjt:  LSLGPSFKDE-SSNKFCTLRYEFKPASIDKKKLGSLKKTKENRVTIEFKN-DQFGKPNVGFVGSSEDYKENDAVLFFDEET

Q91ZD6 ELL-associated factor 2

6.0e-05

41.38

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Query:  LSLGPSFKDESSNKFCTLRYEFKPASIDKKKLGSLKKTKENRVTIEFKNDQFGKPNVG-FVGSSEDY-KENDAVLFFDEETFRLERL
        L LG SF+ +    F T+RY+FKPASID    G+L+  K  +VTI   N +   P V  F GS   Y KE   ++  D    RLE+L
Subjt:  LSLGPSFKDESSNKFCTLRYEFKPASIDKKKLGSLKKTKENRVTIEFKNDQFGKPNVG-FVGSSEDY-KENDAVLFFDEETFRLERL

Arabidopsis top hits

e value

%identity

Alignment

AT1G71080.1 RNA polymerase II transcription elongation factor

1.1e-54

46.78

Show/hide

Query:  MANNNKEELKTAPQPDRWYNLSLGPSFKDESSNKFCTLRYEFKPASIDKKKLGSLKKTKENRVTIEFKNDQFGKPNVGFVGSSEDYKENDAVLFFDEETF
        M+N++++E  TAP+ D+WY+L LG S KD+SS+KFCTLRYEFKPASIDK + GS+ K K+NRV++EF+N+Q GKP V F GSSEDYKE+DAVLFFD E F
Subjt:  MANNNKEELKTAPQPDRWYNLSLGPSFKDESSNKFCTLRYEFKPASIDKKKLGSLKKTKENRVTIEFKNDQFGKPNVGFVGSSEDYKENDAVLFFDEETF

Query:  RLERLHWTPGESSAAATATTITTTAGMAAPAATSTTASVLHSLTPLEPRLSPPVAKVAKPMHMGRGSFSTMPVEVERKDIGELGNTGAKSGVASKGITDY
        RLERLH        A T      T G +A A+         S  P+E RLS PV + AK   + R     +PVEVER +IG+  N+   +          
Subjt:  RLERLHWTPGESSAAATATTITTTAGMAAPAATSTTASVLHSLTPLEPRLSPPVAKVAKPMHMGRGSFSTMPVEVERKDIGELGNTGAKSGVASKGITDY

Query:  SSDPPNVSASSP-GLKYD--DEHQDIHIDDIFG-FVLSNDGNNAEEERVETGFDINIPHQ--NDTDDEVANV-DDSSDEAEKGPNAAEALRAQVNAEGRE
             NV A+SP   K D  DEHQ+I + +IFG F   ND  NAE+E  + G  +   ++  + T++E+A+V DDS  E EKG NAAEALRAQVNAE ++
Subjt:  SSDPPNVSASSP-GLKYD--DEHQDIHIDDIFG-FVLSNDGNNAEEERVETGFDINIPHQ--NDTDDEVANV-DDSSDEAEKGPNAAEALRAQVNAEGRE

Query:  GPTTAAALKAQVNAEGRDNQSSSSSI-SGSGSGSSSGSSSDNSDSEGS-DEDSVTSI
          T++++  +  ++ G D+   S S+ SGSGSG  S S S +  S GS DED V S+
Subjt:  GPTTAAALKAQVNAEGRDNQSSSSSI-SGSGSGSSSGSSSDNSDSEGS-DEDSVTSI

AT5G38050.1 RNA polymerase II transcription elongation factor

1.6e-37

37.57

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Query:  NNNKEELKTAPQPDRWYNLSLGPSFKDES---SNKFCTLRYEFKPASIDKKKLGSLKKTKENRVTIEFKNDQFGKPNVGFVGSSEDY--KENDAVLFFDE
        +N+ EE K AP+P+RWYN++LGP+  + +   S KFCTLRYEFKPASID  K G L K+K+N+VT+EF+N+Q  KP V F G SEDY  ++ DA+LFFD 
Subjt:  NNNKEELKTAPQPDRWYNLSLGPSFKDES---SNKFCTLRYEFKPASIDKKKLGSLKKTKENRVTIEFKNDQFGKPNVGFVGSSEDY--KENDAVLFFDE

Query:  ETFRLERLHWTPGESSAAATATTITTTAGMAAPAATSTTASVLHSLTPLEPRLSPPVAKVAKPMHMGRGSFSTMPVEVERKDIGELGNTGAKSGVASKGI
        E FRLE+LH             ++     +  P  +++ + V+        ++ PPV K  K  H+   +    PV+ E                     
Subjt:  ETFRLERLHWTPGESSAAATATTITTTAGMAAPAATSTTASVLHSLTPLEPRLSPPVAKVAKPMHMGRGSFSTMPVEVERKDIGELGNTGAKSGVASKGI

Query:  TDYSSDPPNVSASSPGLKYDDEHQDIHIDDIFGFVLSNDGNNAEEERVETG---FDINIPHQND-TDDEVANVDDSSDEAEKGPNAAEALRAQVNAEGRE
                               +D++I+D       N+      +  +TG    DIN+PH  +  DDE+A VD + DE+ KG NAAEALRAQVNAE RE
Subjt:  TDYSSDPPNVSASSPGLKYDDEHQDIHIDDIFGFVLSNDGNNAEEERVETG---FDINIPHQND-TDDEVANVDDSSDEAEKGPNAAEALRAQVNAEGRE

Query:  GPTTAAALKAQVNAEGRDNQSSSSSISGSGSGSSSGSSSDNSDSEG
              + K+  +  GR+++SS S +  SGSGSSS S S  S SEG
Subjt:  GPTTAAALKAQVNAEGRDNQSSSSSISGSGSGSSSGSSSDNSDSEG

Sequences

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CDS sequence

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ATGGCAAACAACAACAAAGAAGAGCTGAAGACCGCGCCCCAGCCCGATCGATGGTATAACCTATCTCTTGGTCCTTCATTCAAGGATGAATCCTCCAACAAATTTTGCAC
TCTTCGATATGAATTTAAACCGGCGTCAATTGATAAAAAGAAGTTGGGATCGCTAAAAAAGACCAAGGAAAATAGGGTTACCATTGAATTTAAGAACGATCAATTTGGGA
AACCCAATGTGGGGTTTGTTGGTAGTAGTGAGGATTATAAGGAGAATGATGCCGTTTTGTTTTTTGATGAAGAGACATTCCGGTTGGAGCGTCTGCATTGGACGCCAGGC
GAATCTTCTGCTGCTGCCACTGCCACTACCATTACCACTACCGCTGGCATGGCTGCCCCCGCCGCCACATCCACCACTGCTTCAGTCCTTCATTCTTTGACGCCGCTGGA
GCCTCGGTTATCTCCTCCAGTGGCTAAAGTTGCCAAACCTATGCATATGGGTCGAGGCAGTTTTTCGACGATGCCAGTAGAGGTGGAAAGAAAAGATATTGGAGAGCTAG
GAAATACAGGTGCAAAATCTGGTGTTGCTAGTAAGGGGATTACGGATTACTCATCAGATCCACCAAATGTATCTGCTTCCTCTCCTGGCCTGAAGTATGATGATGAGCAT
CAAGATATACATATTGATGATATTTTCGGGTTTGTTTTGTCTAATGATGGAAATAATGCCGAAGAAGAAAGAGTTGAGACTGGGTTCGATATAAATATACCACATCAGAA
CGATACAGACGATGAGGTTGCTAATGTGGATGATAGTAGTGATGAAGCTGAGAAGGGACCTAATGCTGCAGAAGCCCTCAGAGCTCAGGTTAATGCAGAGGGCAGGGAGG
GACCTACTACTGCAGCAGCTCTCAAAGCACAGGTTAATGCAGAGGGTAGGGACAACCAGAGCTCGAGTTCTAGCATTAGCGGTTCGGGCAGTGGCAGCAGCAGCGGCAGC
AGTAGTGACAACAGTGATAGTGAAGGTAGTGATGAGGATTCGGTTACCTCAATATGA

mRNA sequence

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Protein sequence

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MANNNKEELKTAPQPDRWYNLSLGPSFKDESSNKFCTLRYEFKPASIDKKKLGSLKKTKENRVTIEFKNDQFGKPNVGFVGSSEDYKENDAVLFFDEETFRLERLHWTPG
ESSAAATATTITTTAGMAAPAATSTTASVLHSLTPLEPRLSPPVAKVAKPMHMGRGSFSTMPVEVERKDIGELGNTGAKSGVASKGITDYSSDPPNVSASSPGLKYDDEH
QDIHIDDIFGFVLSNDGNNAEEERVETGFDINIPHQNDTDDEVANVDDSSDEAEKGPNAAEALRAQVNAEGREGPTTAAALKAQVNAEGRDNQSSSSSISGSGSGSSSGS
SSDNSDSEGSDEDSVTSI

HG10006172 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome