; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10006192 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10006192
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Descriptionpentatricopeptide repeat-containing protein At2g34400
Genome locationChr07:15549580..15550383
RNA-Seq ExpressionHG10006192
SyntenyHG10006192
Gene Ontology termsGO:0005515 - protein binding (molecular function)
InterPro domainsIPR002885 - Pentatricopeptide repeat
IPR011990 - Tetratricopeptide-like helical domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7029836.1 Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma]9.0e-13192Show/hide
Query:  MLTNSIHKPSSFLYKIVDLKDFAYASDFFSNILDPTEYSFNVMIRGLSTTWNKSSLALEFYSRMKFLGLKPNKLTYPFLFIACSNLLAVEDGRVGHCSVI
        MLTNSIHKP+SFLYK+VDLKDFAYAS FFS IL+PTEY+FNVMIRGLSTTWNKSSLALEFYSRMKFLGLKPNKLTYPFLFIACSNLLAVE+GRVGH SVI
Subjt:  MLTNSIHKPSSFLYKIVDLKDFAYASDFFSNILDPTEYSFNVMIRGLSTTWNKSSLALEFYSRMKFLGLKPNKLTYPFLFIACSNLLAVEDGRVGHCSVI

Query:  KRGLDEDGHVSHSLITMYARCGQVSHARKVFDEIPEKDLVSWNSMISGYSKMRHAGEAVGLFREMMEAGFQPNEMTLVSVLGACGELGDLELGTWVEEFV
        KRGLDEDGHVSHSLITMYARCG+V  ARKVFDEIPEKDLVSWNSMISGYSKMRHA EAVGLFR+MM+AGF PNEMTLVSVLGACGELGDL+LGTWVEEFV
Subjt:  KRGLDEDGHVSHSLITMYARCGQVSHARKVFDEIPEKDLVSWNSMISGYSKMRHAGEAVGLFREMMEAGFQPNEMTLVSVLGACGELGDLELGTWVEEFV

Query:  VENKMVLNSFIGSALIHMYGKCGDLVSARRIFDSMKKKDKVTWNAMITGQ
        V+N+MVLNS++GSALIHMYGKCGDLVSARRIFDSMKKKDKVTWNAMITGQ
Subjt:  VENKMVLNSFIGSALIHMYGKCGDLVSARRIFDSMKKKDKVTWNAMITGQ

XP_022929625.1 pentatricopeptide repeat-containing protein At2g34400 [Cucurbita moschata]1.8e-13189.23Show/hide
Query:  MLTNSIHKPSSFLYKIVDLKDFAYASDFFSNILDPTEYSFNVMIRGLSTTWNKSSLALEFYSRMKFLGLKPNKLTYPFLFIACSNLLAVEDGRVGHCSVI
        MLTNSIHKP+SFLYK+VDLKDFAYASDFFS IL+PTEY+FNVMIRGLSTTWNKSSLALEFYSRMKFLGLKPNKLTYPFLFIACSNLLAVE+GRVGH SVI
Subjt:  MLTNSIHKPSSFLYKIVDLKDFAYASDFFSNILDPTEYSFNVMIRGLSTTWNKSSLALEFYSRMKFLGLKPNKLTYPFLFIACSNLLAVEDGRVGHCSVI

Query:  KRGLDEDGHVSHSLITMYARCGQVSHARKVFDEIPEKDLVSWNSMISGYSKMRHAGEAVGLFREMMEAGFQPNEMTLVSVLGACGELGDLELGTWVEEFV
        KRGLDEDGHVSHSLITMYARCG+V  ARKVFDEIPEKDLVSWNSMISGYSKMRHA EAVGLFR+MM+AGF PNEMTLVSVLGACGELGDL+LGTWVEEFV
Subjt:  KRGLDEDGHVSHSLITMYARCGQVSHARKVFDEIPEKDLVSWNSMISGYSKMRHAGEAVGLFREMMEAGFQPNEMTLVSVLGACGELGDLELGTWVEEFV

Query:  VENKMVLNSFIGSALIHMYGKCGDLVSARRIFDSMKKKDKVTWNAMITGQVNDHLLFEPI
        V+N+MVLNS++GSALIHMYGKCGDLVSARRIFDSMKKKDKVTWNAMITG   + +  E I
Subjt:  VENKMVLNSFIGSALIHMYGKCGDLVSARRIFDSMKKKDKVTWNAMITGQVNDHLLFEPI

XP_022997564.1 pentatricopeptide repeat-containing protein At2g34400 [Cucurbita maxima]1.2e-13088.46Show/hide
Query:  MLTNSIHKPSSFLYKIVDLKDFAYASDFFSNILDPTEYSFNVMIRGLSTTWNKSSLALEFYSRMKFLGLKPNKLTYPFLFIACSNLLAVEDGRVGHCSVI
        MLTNSIHKP+SFLYK+VDLKDFAYASDFFS IL+PTEY+FNVMIRGLSTTWNKSSLALEFYSRMKFLGLKPNKLTYPFLFIACSNLLAVE+GRVGH SVI
Subjt:  MLTNSIHKPSSFLYKIVDLKDFAYASDFFSNILDPTEYSFNVMIRGLSTTWNKSSLALEFYSRMKFLGLKPNKLTYPFLFIACSNLLAVEDGRVGHCSVI

Query:  KRGLDEDGHVSHSLITMYARCGQVSHARKVFDEIPEKDLVSWNSMISGYSKMRHAGEAVGLFREMMEAGFQPNEMTLVSVLGACGELGDLELGTWVEEFV
        KRGLDEDGHVSHSLITMYARCG+V  ARKVFDEIPEKDLVSWNSMISGYSKMRHA EAVGLF +MM+AGF+PNEMTLVSVLGACGELGDL+LGTWVEEFV
Subjt:  KRGLDEDGHVSHSLITMYARCGQVSHARKVFDEIPEKDLVSWNSMISGYSKMRHAGEAVGLFREMMEAGFQPNEMTLVSVLGACGELGDLELGTWVEEFV

Query:  VENKMVLNSFIGSALIHMYGKCGDLVSARRIFDSMKKKDKVTWNAMITGQVNDHLLFEPI
        ++N+MVLNS++GSALIHMYGKCGDLVSARRIFDSMKKKDKVTWNAMITG   + +  E I
Subjt:  VENKMVLNSFIGSALIHMYGKCGDLVSARRIFDSMKKKDKVTWNAMITGQVNDHLLFEPI

XP_023521362.1 pentatricopeptide repeat-containing protein At2g34400-like [Cucurbita pepo subsp. pepo]1.8e-13189.23Show/hide
Query:  MLTNSIHKPSSFLYKIVDLKDFAYASDFFSNILDPTEYSFNVMIRGLSTTWNKSSLALEFYSRMKFLGLKPNKLTYPFLFIACSNLLAVEDGRVGHCSVI
        MLTNSIHKP+SFLYK+VDLKDFAYASDFFS IL+PTEY+FNVMIRGLSTTWNKSSLALEFYSRMKFLGLKPNKLTYPFLFIACSNLLAVE+GRVGH SVI
Subjt:  MLTNSIHKPSSFLYKIVDLKDFAYASDFFSNILDPTEYSFNVMIRGLSTTWNKSSLALEFYSRMKFLGLKPNKLTYPFLFIACSNLLAVEDGRVGHCSVI

Query:  KRGLDEDGHVSHSLITMYARCGQVSHARKVFDEIPEKDLVSWNSMISGYSKMRHAGEAVGLFREMMEAGFQPNEMTLVSVLGACGELGDLELGTWVEEFV
        KRGLDEDGHVSHSLITMYARCG+V  ARKVFDEIPEKDLVSWNSMISGYSKMRHA EAVGLFR+MM+AGF PNEMTLVSVLGACGELGDL+LGTWVEEFV
Subjt:  KRGLDEDGHVSHSLITMYARCGQVSHARKVFDEIPEKDLVSWNSMISGYSKMRHAGEAVGLFREMMEAGFQPNEMTLVSVLGACGELGDLELGTWVEEFV

Query:  VENKMVLNSFIGSALIHMYGKCGDLVSARRIFDSMKKKDKVTWNAMITGQVNDHLLFEPI
        V+N+MVLNS++GSALIHMYGKCGDLVSARRIFDSMKKKDKVTWNAMITG   + +  E I
Subjt:  VENKMVLNSFIGSALIHMYGKCGDLVSARRIFDSMKKKDKVTWNAMITGQVNDHLLFEPI

XP_038889591.1 pentatricopeptide repeat-containing protein At2g34400 [Benincasa hispida]8.1e-13290Show/hide
Query:  MLTNSIHKPSSFLYKIVDLKDFAYASDFFSNILDPTEYSFNVMIRGLSTTWNKSSLALEFYSRMKFLGLKPNKLTYPFLFIACSNLLAVEDGRVGHCSVI
        MLTNSIHKP+SFLYKIVDLKDFAY+ DFFS I++PTEYSFNVMIRGL+ TWNKSSLALE Y RMKFLGLKPNKLTYPFLFIACSNLLAVE+GRVGHCSVI
Subjt:  MLTNSIHKPSSFLYKIVDLKDFAYASDFFSNILDPTEYSFNVMIRGLSTTWNKSSLALEFYSRMKFLGLKPNKLTYPFLFIACSNLLAVEDGRVGHCSVI

Query:  KRGLDEDGHVSHSLITMYARCGQVSHARKVFDEIPEKDLVSWNSMISGYSKMRHAGEAVGLFREMMEAGFQPNEMTLVSVLGACGELGDLELGTWVEEFV
        KRGLDEDGHVSHSLITMYARCGQV  ARKVFDEIPEKDLVSW+SMISGYSKMRHAGEAVGLFREMMEAGFQPNEM LVSVLGACGELGDL+LGTWVEEFV
Subjt:  KRGLDEDGHVSHSLITMYARCGQVSHARKVFDEIPEKDLVSWNSMISGYSKMRHAGEAVGLFREMMEAGFQPNEMTLVSVLGACGELGDLELGTWVEEFV

Query:  VENKMVLNSFIGSALIHMYGKCGDLVSARRIFDSMKKKDKVTWNAMITGQVNDHLLFEPI
        VENKMVLNSF+GSALIHMYGKCGDLVSARRIFDSMKKKDKVTWNAMITG   + +  E I
Subjt:  VENKMVLNSFIGSALIHMYGKCGDLVSARRIFDSMKKKDKVTWNAMITGQVNDHLLFEPI

TrEMBL top hitse value%identityAlignment
A0A0A0LMG0 Uncharacterized protein7.4e-13188.85Show/hide
Query:  MLTNSIHKPSSFLYKIVDLKDFAYASDFFSNILDPTEYSFNVMIRGLSTTWNKSSLALEFYSRMKFLGLKPNKLTYPFLFIACSNLLAVEDGRVGHCSVI
        +LTNSIHKP+SFLYKI DLKDFAYAS FFSNILDPTEYSFNVMIRGLST WNKSSLALEFYSRMKFLGLKPN LTYPFLFIACSNLLAVE+GR+GHCSVI
Subjt:  MLTNSIHKPSSFLYKIVDLKDFAYASDFFSNILDPTEYSFNVMIRGLSTTWNKSSLALEFYSRMKFLGLKPNKLTYPFLFIACSNLLAVEDGRVGHCSVI

Query:  KRGLDEDGHVSHSLITMYARCGQVSHARKVFDEIPEKDLVSWNSMISGYSKMRHAGEAVGLFREMMEAGFQPNEMTLVSVLGACGELGDLELGTWVEEFV
        +RGLDEDGHVSHSLITMYARCG++  ARKVFDEI +KDLVSWNSMISGYSKMRHAGEAVGLFREMMEAGFQPNEM+LVSVLGACGELGDL+LGTWVEEFV
Subjt:  KRGLDEDGHVSHSLITMYARCGQVSHARKVFDEIPEKDLVSWNSMISGYSKMRHAGEAVGLFREMMEAGFQPNEMTLVSVLGACGELGDLELGTWVEEFV

Query:  VENKMVLNSFIGSALIHMYGKCGDLVSARRIFDSMKKKDKVTWNAMITGQVNDHLLFEPI
        VENKM LN F+GSALIHMYGKCGDLVSARRIFDSMKKKDKVTWNAMITG   + +  E I
Subjt:  VENKMVLNSFIGSALIHMYGKCGDLVSARRIFDSMKKKDKVTWNAMITGQVNDHLLFEPI

A0A1S3BRJ2 pentatricopeptide repeat-containing protein At2g344001.2e-12887.69Show/hide
Query:  MLTNSIHKPSSFLYKIVDLKDFAYASDFFSNILDPTEYSFNVMIRGLSTTWNKSSLALEFYSRMKFLGLKPNKLTYPFLFIACSNLLAVEDGRVGHCSVI
        +LTNSI+KP+SFLYKIVDLKDFAYAS FFSNIL+PTEYSFNVMIRGLST WNK SLALEFYSRMKFLGLKPNK TYPFLFIACSNLLAV++GR+GHCS I
Subjt:  MLTNSIHKPSSFLYKIVDLKDFAYASDFFSNILDPTEYSFNVMIRGLSTTWNKSSLALEFYSRMKFLGLKPNKLTYPFLFIACSNLLAVEDGRVGHCSVI

Query:  KRGLDEDGHVSHSLITMYARCGQVSHARKVFDEIPEKDLVSWNSMISGYSKMRHAGEAVGLFREMMEAGFQPNEMTLVSVLGACGELGDLELGTWVEEFV
        KRGLDEDGHVSHSLITMYARCG++  ARKVFDEI +KDLVSWNSMISGYSKMRHAGEAVGLFREMMEAGFQPNEM+LVSVLGACGELGDL+LGTWVEEFV
Subjt:  KRGLDEDGHVSHSLITMYARCGQVSHARKVFDEIPEKDLVSWNSMISGYSKMRHAGEAVGLFREMMEAGFQPNEMTLVSVLGACGELGDLELGTWVEEFV

Query:  VENKMVLNSFIGSALIHMYGKCGDLVSARRIFDSMKKKDKVTWNAMITGQVNDHLLFEPI
        VENKM LNSF+GSALIHMYGKCGDLVSARRIFDS KKKDKVTWNAMITG   + +  E I
Subjt:  VENKMVLNSFIGSALIHMYGKCGDLVSARRIFDSMKKKDKVTWNAMITGQVNDHLLFEPI

A0A6J1DIG6 pentatricopeptide repeat-containing protein At2g344003.4e-12887.31Show/hide
Query:  MLTNSIHKPSSFLYKIVDLKDFAYASDFFSNILDPTEYSFNVMIRGLSTTWNKSSLALEFYSRMKFLGLKPNKLTYPFLFIACSNLLAVEDGRVGHCSVI
        M+TNSIHKP+SFL+KI DLKDFAYASDFFS IL+PTEY+FNVMIRGLSTTWNKSSLALE Y RMKFLGLKPNKLTYPFLFIACSNLLAVE GRVGH SV+
Subjt:  MLTNSIHKPSSFLYKIVDLKDFAYASDFFSNILDPTEYSFNVMIRGLSTTWNKSSLALEFYSRMKFLGLKPNKLTYPFLFIACSNLLAVEDGRVGHCSVI

Query:  KRGLDEDGHVSHSLITMYARCGQVSHARKVFDEIPEKDLVSWNSMISGYSKMRHAGEAVGLFREMMEAGFQPNEMTLVSVLGACGELGDLELGTWVEEFV
        KRG DEDGHVSHSLITMYARCG++  ARKVFDEIPE+DLVSWNSMISGYSKMR+A EAVGLFREMM AGF+PNEMTLVSVLGACGELGDL+LGTWVEEFV
Subjt:  KRGLDEDGHVSHSLITMYARCGQVSHARKVFDEIPEKDLVSWNSMISGYSKMRHAGEAVGLFREMMEAGFQPNEMTLVSVLGACGELGDLELGTWVEEFV

Query:  VENKMVLNSFIGSALIHMYGKCGDLVSARRIFDSMKKKDKVTWNAMITGQVNDHLLFEPI
        VENKMVLNSF+GSALIHMYGKCGDLVSARRIF+SMKKKDKVTWNAMITG   + L  E I
Subjt:  VENKMVLNSFIGSALIHMYGKCGDLVSARRIFDSMKKKDKVTWNAMITGQVNDHLLFEPI

A0A6J1EUW3 pentatricopeptide repeat-containing protein At2g344008.7e-13289.23Show/hide
Query:  MLTNSIHKPSSFLYKIVDLKDFAYASDFFSNILDPTEYSFNVMIRGLSTTWNKSSLALEFYSRMKFLGLKPNKLTYPFLFIACSNLLAVEDGRVGHCSVI
        MLTNSIHKP+SFLYK+VDLKDFAYASDFFS IL+PTEY+FNVMIRGLSTTWNKSSLALEFYSRMKFLGLKPNKLTYPFLFIACSNLLAVE+GRVGH SVI
Subjt:  MLTNSIHKPSSFLYKIVDLKDFAYASDFFSNILDPTEYSFNVMIRGLSTTWNKSSLALEFYSRMKFLGLKPNKLTYPFLFIACSNLLAVEDGRVGHCSVI

Query:  KRGLDEDGHVSHSLITMYARCGQVSHARKVFDEIPEKDLVSWNSMISGYSKMRHAGEAVGLFREMMEAGFQPNEMTLVSVLGACGELGDLELGTWVEEFV
        KRGLDEDGHVSHSLITMYARCG+V  ARKVFDEIPEKDLVSWNSMISGYSKMRHA EAVGLFR+MM+AGF PNEMTLVSVLGACGELGDL+LGTWVEEFV
Subjt:  KRGLDEDGHVSHSLITMYARCGQVSHARKVFDEIPEKDLVSWNSMISGYSKMRHAGEAVGLFREMMEAGFQPNEMTLVSVLGACGELGDLELGTWVEEFV

Query:  VENKMVLNSFIGSALIHMYGKCGDLVSARRIFDSMKKKDKVTWNAMITGQVNDHLLFEPI
        V+N+MVLNS++GSALIHMYGKCGDLVSARRIFDSMKKKDKVTWNAMITG   + +  E I
Subjt:  VENKMVLNSFIGSALIHMYGKCGDLVSARRIFDSMKKKDKVTWNAMITGQVNDHLLFEPI

A0A6J1KBU4 pentatricopeptide repeat-containing protein At2g344005.7e-13188.46Show/hide
Query:  MLTNSIHKPSSFLYKIVDLKDFAYASDFFSNILDPTEYSFNVMIRGLSTTWNKSSLALEFYSRMKFLGLKPNKLTYPFLFIACSNLLAVEDGRVGHCSVI
        MLTNSIHKP+SFLYK+VDLKDFAYASDFFS IL+PTEY+FNVMIRGLSTTWNKSSLALEFYSRMKFLGLKPNKLTYPFLFIACSNLLAVE+GRVGH SVI
Subjt:  MLTNSIHKPSSFLYKIVDLKDFAYASDFFSNILDPTEYSFNVMIRGLSTTWNKSSLALEFYSRMKFLGLKPNKLTYPFLFIACSNLLAVEDGRVGHCSVI

Query:  KRGLDEDGHVSHSLITMYARCGQVSHARKVFDEIPEKDLVSWNSMISGYSKMRHAGEAVGLFREMMEAGFQPNEMTLVSVLGACGELGDLELGTWVEEFV
        KRGLDEDGHVSHSLITMYARCG+V  ARKVFDEIPEKDLVSWNSMISGYSKMRHA EAVGLF +MM+AGF+PNEMTLVSVLGACGELGDL+LGTWVEEFV
Subjt:  KRGLDEDGHVSHSLITMYARCGQVSHARKVFDEIPEKDLVSWNSMISGYSKMRHAGEAVGLFREMMEAGFQPNEMTLVSVLGACGELGDLELGTWVEEFV

Query:  VENKMVLNSFIGSALIHMYGKCGDLVSARRIFDSMKKKDKVTWNAMITGQVNDHLLFEPI
        ++N+MVLNS++GSALIHMYGKCGDLVSARRIFDSMKKKDKVTWNAMITG   + +  E I
Subjt:  VENKMVLNSFIGSALIHMYGKCGDLVSARRIFDSMKKKDKVTWNAMITGQVNDHLLFEPI

SwissProt top hitse value%identityAlignment
O64705 Pentatricopeptide repeat-containing protein At2g344008.3e-7957.66Show/hide
Query:  MLTNSIHKPSSFLYKIVDLKDFAYASDFFSNILDPTEYSFNVMIRGLSTTWNKSSLALEFYSRMKFLGLKPNKLTYPFLFIACSNLLAVEDGRVGHCSVI
        ML +S+ KP+  + K V+L DF Y+S  FS   +P  YSFN MIRGL+ TWN    AL  Y RMKF GLKP+K TY F+FIAC+ L  +  GR  H S+ 
Subjt:  MLTNSIHKPSSFLYKIVDLKDFAYASDFFSNILDPTEYSFNVMIRGLSTTWNKSSLALEFYSRMKFLGLKPNKLTYPFLFIACSNLLAVEDGRVGHCSVI

Query:  KRGLDEDGHVSHSLITMYARCGQVSHARKVFDEIPEKDLVSWNSMISGYSKMRHAGEAVGLFREMMEAGFQPNEMTLVSVLGACGELGDLELGTWVEEFV
        K GL+ D H++HSLI MYA+CGQV +ARK+FDEI E+D VSWNSMISGYS+  +A +A+ LFR+M E GF+P+E TLVS+LGAC  LGDL  G  +EE  
Subjt:  KRGLDEDGHVSHSLITMYARCGQVSHARKVFDEIPEKDLVSWNSMISGYSKMRHAGEAVGLFREMMEAGFQPNEMTLVSVLGACGELGDLELGTWVEEFV

Query:  VENKMVLNSFIGSALIHMYGKCGDLVSARRIFDSMKKKDKVTWNAMIT
        +  K+ L++F+GS LI MYGKCGDL SARR+F+ M KKD+V W AMIT
Subjt:  VENKMVLNSFIGSALIHMYGKCGDLVSARRIFDSMKKKDKVTWNAMIT

P93011 Pentatricopeptide repeat-containing protein At2g337601.7e-4434.51Show/hide
Query:  MLTNSIHKPSSFLYKIVDL----KDFAYASDFFSNILDPTEYSFNVMIRGLSTTWNKSSLALE---FYSRMKFLGLKPNKLTYPFLFIACSNLLAVEDGR
        ++     +  S L K++ L    +  AY    F ++  P ++ FN +I+  S    K  L L    +Y RM    + P+  T+  +  +C++L A+  G+
Subjt:  MLTNSIHKPSSFLYKIVDL----KDFAYASDFFSNILDPTEYSFNVMIRGLSTTWNKSSLALE---FYSRMKFLGLKPNKLTYPFLFIACSNLLAVEDGR

Query:  VGHCSVIKRGLDEDGHVSHSLITMYARCGQVSHARKVFDEIPEKDLVSWNSMISGYSKMRHAGEAVGLFREMMEAGFQPNEMTLVSVLGACGELGDLELG
          HC  +  G   D +V  +L+T Y++CG +  AR+VFD +PEK +V+WNS++SG+ +   A EA+ +F +M E+GF+P+  T VS+L AC + G + LG
Subjt:  VGHCSVIKRGLDEDGHVSHSLITMYARCGQVSHARKVFDEIPEKDLVSWNSMISGYSKMRHAGEAVGLFREMMEAGFQPNEMTLVSVLGACGELGDLELG

Query:  TWVEEFVVENKMVLNSFIGSALIHMYGKCGDLVSARRIFDSMKKKDKVTWNAMIT
        +WV ++++   + LN  +G+ALI++Y +CGD+  AR +FD MK+ +   W AMI+
Subjt:  TWVEEFVVENKMVLNSFIGSALIHMYGKCGDLVSARRIFDSMKKKDKVTWNAMIT

Q0WQW5 Pentatricopeptide repeat-containing protein At1g59720, chloroplastic/mitochondrial9.5e-4338.46Show/hide
Query:  FLY-KIVDL----KDFAYASDFFSNILDPTEYSFNVMIRGLSTTWNKSSLALEFYSRMKFLG-LKPNKLTYPFLFIACSNLLAVEDGRVGHCSVIKRGLD
        FLY KI+ L     D  YA   F +I + + + +N +IR  +   ++   A   Y +M   G   P+K T+PF+  AC+ +    +G+  HC ++K G  
Subjt:  FLY-KIVDL----KDFAYASDFFSNILDPTEYSFNVMIRGLSTTWNKSSLALEFYSRMKFLG-LKPNKLTYPFLFIACSNLLAVEDGRVGHCSVIKRGLD

Query:  EDGHVSHSLITMYARCGQVSHARKVFDEIPEKDLVSWNSMISGYSKMRHAGEAVGLFREMMEAGFQPNEMTLVSVLGACGELGDLELGTWVEEFVVEN--
         D +V++ LI +Y  CG +  ARKVFDE+PE+ LVSWNSMI    +      A+ LFRE M+  F+P+  T+ SVL AC  LG L LGTW   F++    
Subjt:  EDGHVSHSLITMYARCGQVSHARKVFDEIPEKDLVSWNSMISGYSKMRHAGEAVGLFREMMEAGFQPNEMTLVSVLGACGELGDLELGTWVEEFVVEN--

Query:  -KMVLNSFIGSALIHMYGKCGDLVSARRIFDSMKKKDKVTWNAMITG
          + ++  + ++LI MY KCG L  A ++F  M+K+D  +WNAMI G
Subjt:  -KMVLNSFIGSALIHMYGKCGDLVSARRIFDSMKKKDKVTWNAMITG

Q8LK93 Pentatricopeptide repeat-containing protein At2g02980, chloroplastic4.0e-4137.35Show/hide
Query:  SFLYKIVDL-------KDFAYASDFFSNILDPTEYSFNVMIRGLSTTWNKSSLALEFYSRMKFLGLKPNKLTYPFLFIACSNLLAVEDGRVGHCSVIKRG
        SF+ K+++           +YA   F  + +P    FN M RG S   N   +   F   ++  G+ P+  T+P L  AC+   A+E+GR  HC  +K G
Subjt:  SFLYKIVDL-------KDFAYASDFFSNILDPTEYSFNVMIRGLSTTWNKSSLALEFYSRMKFLGLKPNKLTYPFLFIACSNLLAVEDGRVGHCSVIKRG

Query:  LDEDGHVSHSLITMYARCGQVSHARKVFDEIPEKDLVSWNSMISGYSKMRHAGEAVGLFREMMEAGFQPNEMTLVSVLGACGELGDLELGTWVEEFVVEN
        LD++ +V  +LI MY  C  V  AR VFD I E  +V +N+MI+GY++     EA+ LFREM     +PNE+TL+SVL +C  LG L+LG W+ ++  ++
Subjt:  LDEDGHVSHSLITMYARCGQVSHARKVFDEIPEKDLVSWNSMISGYSKMRHAGEAVGLFREMMEAGFQPNEMTLVSVLGACGELGDLELGTWVEEFVVEN

Query:  KMVLNSFIGSALIHMYGKCGDLVSARRIFDSMKKKDKVTWNAMITGQVN
               + +ALI M+ KCG L  A  IF+ M+ KD   W+AMI    N
Subjt:  KMVLNSFIGSALIHMYGKCGDLVSARRIFDSMKKKDKVTWNAMITGQVN

Q9MA95 Putative pentatricopeptide repeat-containing protein At3g052401.8e-4137.13Show/hide
Query:  DFAYASDFFSNILDPTEYSFNVMIRGLSTTWNKSSLALEFYSRMKFLGLKPNKLTYPFLFIACSNLLAVEDGRVGHCSVIKRGLDEDGHVSHSLITMYAR
        + +YA   F +I  P+ Y +N MIRG S + N    AL FY  M   G  P+  T+P++  ACS L  ++ G   H  V+K G + + +VS  L+ MY  
Subjt:  DFAYASDFFSNILDPTEYSFNVMIRGLSTTWNKSSLALEFYSRMKFLGLKPNKLTYPFLFIACSNLLAVEDGRVGHCSVIKRGLDEDGHVSHSLITMYAR

Query:  CGQVSHARKVFDEIPEKDLVSWNSMISGYSKMRHAGEAVGLFREMMEAGFQPNEMTLVSVLGACGELGDLELGTWVEEFV--------VENKMVLNSFIG
        CG+V++  +VF++IP+ ++V+W S+ISG+       +A+  FREM   G + NE  +V +L ACG   D+  G W   F+         ++K+  N  + 
Subjt:  CGQVSHARKVFDEIPEKDLVSWNSMISGYSKMRHAGEAVGLFREMMEAGFQPNEMTLVSVLGACGELGDLELGTWVEEFV--------VENKMVLNSFIG

Query:  SALIHMYGKCGDLVSARRIFDSMKKKDKVTWNAMITG
        ++LI MY KCGDL +AR +FD M ++  V+WN++ITG
Subjt:  SALIHMYGKCGDLVSARRIFDSMKKKDKVTWNAMITG

Arabidopsis top hitse value%identityAlignment
AT1G59720.1 Tetratricopeptide repeat (TPR)-like superfamily protein6.8e-4438.46Show/hide
Query:  FLY-KIVDL----KDFAYASDFFSNILDPTEYSFNVMIRGLSTTWNKSSLALEFYSRMKFLG-LKPNKLTYPFLFIACSNLLAVEDGRVGHCSVIKRGLD
        FLY KI+ L     D  YA   F +I + + + +N +IR  +   ++   A   Y +M   G   P+K T+PF+  AC+ +    +G+  HC ++K G  
Subjt:  FLY-KIVDL----KDFAYASDFFSNILDPTEYSFNVMIRGLSTTWNKSSLALEFYSRMKFLG-LKPNKLTYPFLFIACSNLLAVEDGRVGHCSVIKRGLD

Query:  EDGHVSHSLITMYARCGQVSHARKVFDEIPEKDLVSWNSMISGYSKMRHAGEAVGLFREMMEAGFQPNEMTLVSVLGACGELGDLELGTWVEEFVVEN--
         D +V++ LI +Y  CG +  ARKVFDE+PE+ LVSWNSMI    +      A+ LFRE M+  F+P+  T+ SVL AC  LG L LGTW   F++    
Subjt:  EDGHVSHSLITMYARCGQVSHARKVFDEIPEKDLVSWNSMISGYSKMRHAGEAVGLFREMMEAGFQPNEMTLVSVLGACGELGDLELGTWVEEFVVEN--

Query:  -KMVLNSFIGSALIHMYGKCGDLVSARRIFDSMKKKDKVTWNAMITG
          + ++  + ++LI MY KCG L  A ++F  M+K+D  +WNAMI G
Subjt:  -KMVLNSFIGSALIHMYGKCGDLVSARRIFDSMKKKDKVTWNAMITG

AT2G02980.1 Pentatricopeptide repeat (PPR) superfamily protein2.8e-4237.35Show/hide
Query:  SFLYKIVDL-------KDFAYASDFFSNILDPTEYSFNVMIRGLSTTWNKSSLALEFYSRMKFLGLKPNKLTYPFLFIACSNLLAVEDGRVGHCSVIKRG
        SF+ K+++           +YA   F  + +P    FN M RG S   N   +   F   ++  G+ P+  T+P L  AC+   A+E+GR  HC  +K G
Subjt:  SFLYKIVDL-------KDFAYASDFFSNILDPTEYSFNVMIRGLSTTWNKSSLALEFYSRMKFLGLKPNKLTYPFLFIACSNLLAVEDGRVGHCSVIKRG

Query:  LDEDGHVSHSLITMYARCGQVSHARKVFDEIPEKDLVSWNSMISGYSKMRHAGEAVGLFREMMEAGFQPNEMTLVSVLGACGELGDLELGTWVEEFVVEN
        LD++ +V  +LI MY  C  V  AR VFD I E  +V +N+MI+GY++     EA+ LFREM     +PNE+TL+SVL +C  LG L+LG W+ ++  ++
Subjt:  LDEDGHVSHSLITMYARCGQVSHARKVFDEIPEKDLVSWNSMISGYSKMRHAGEAVGLFREMMEAGFQPNEMTLVSVLGACGELGDLELGTWVEEFVVEN

Query:  KMVLNSFIGSALIHMYGKCGDLVSARRIFDSMKKKDKVTWNAMITGQVN
               + +ALI M+ KCG L  A  IF+ M+ KD   W+AMI    N
Subjt:  KMVLNSFIGSALIHMYGKCGDLVSARRIFDSMKKKDKVTWNAMITGQVN

AT2G33760.1 Pentatricopeptide repeat (PPR) superfamily protein1.2e-4534.51Show/hide
Query:  MLTNSIHKPSSFLYKIVDL----KDFAYASDFFSNILDPTEYSFNVMIRGLSTTWNKSSLALE---FYSRMKFLGLKPNKLTYPFLFIACSNLLAVEDGR
        ++     +  S L K++ L    +  AY    F ++  P ++ FN +I+  S    K  L L    +Y RM    + P+  T+  +  +C++L A+  G+
Subjt:  MLTNSIHKPSSFLYKIVDL----KDFAYASDFFSNILDPTEYSFNVMIRGLSTTWNKSSLALE---FYSRMKFLGLKPNKLTYPFLFIACSNLLAVEDGR

Query:  VGHCSVIKRGLDEDGHVSHSLITMYARCGQVSHARKVFDEIPEKDLVSWNSMISGYSKMRHAGEAVGLFREMMEAGFQPNEMTLVSVLGACGELGDLELG
          HC  +  G   D +V  +L+T Y++CG +  AR+VFD +PEK +V+WNS++SG+ +   A EA+ +F +M E+GF+P+  T VS+L AC + G + LG
Subjt:  VGHCSVIKRGLDEDGHVSHSLITMYARCGQVSHARKVFDEIPEKDLVSWNSMISGYSKMRHAGEAVGLFREMMEAGFQPNEMTLVSVLGACGELGDLELG

Query:  TWVEEFVVENKMVLNSFIGSALIHMYGKCGDLVSARRIFDSMKKKDKVTWNAMIT
        +WV ++++   + LN  +G+ALI++Y +CGD+  AR +FD MK+ +   W AMI+
Subjt:  TWVEEFVVENKMVLNSFIGSALIHMYGKCGDLVSARRIFDSMKKKDKVTWNAMIT

AT2G34400.1 Pentatricopeptide repeat (PPR-like) superfamily protein5.9e-8057.66Show/hide
Query:  MLTNSIHKPSSFLYKIVDLKDFAYASDFFSNILDPTEYSFNVMIRGLSTTWNKSSLALEFYSRMKFLGLKPNKLTYPFLFIACSNLLAVEDGRVGHCSVI
        ML +S+ KP+  + K V+L DF Y+S  FS   +P  YSFN MIRGL+ TWN    AL  Y RMKF GLKP+K TY F+FIAC+ L  +  GR  H S+ 
Subjt:  MLTNSIHKPSSFLYKIVDLKDFAYASDFFSNILDPTEYSFNVMIRGLSTTWNKSSLALEFYSRMKFLGLKPNKLTYPFLFIACSNLLAVEDGRVGHCSVI

Query:  KRGLDEDGHVSHSLITMYARCGQVSHARKVFDEIPEKDLVSWNSMISGYSKMRHAGEAVGLFREMMEAGFQPNEMTLVSVLGACGELGDLELGTWVEEFV
        K GL+ D H++HSLI MYA+CGQV +ARK+FDEI E+D VSWNSMISGYS+  +A +A+ LFR+M E GF+P+E TLVS+LGAC  LGDL  G  +EE  
Subjt:  KRGLDEDGHVSHSLITMYARCGQVSHARKVFDEIPEKDLVSWNSMISGYSKMRHAGEAVGLFREMMEAGFQPNEMTLVSVLGACGELGDLELGTWVEEFV

Query:  VENKMVLNSFIGSALIHMYGKCGDLVSARRIFDSMKKKDKVTWNAMIT
        +  K+ L++F+GS LI MYGKCGDL SARR+F+ M KKD+V W AMIT
Subjt:  VENKMVLNSFIGSALIHMYGKCGDLVSARRIFDSMKKKDKVTWNAMIT

AT3G05240.1 mitochondrial editing factor 191.3e-4237.13Show/hide
Query:  DFAYASDFFSNILDPTEYSFNVMIRGLSTTWNKSSLALEFYSRMKFLGLKPNKLTYPFLFIACSNLLAVEDGRVGHCSVIKRGLDEDGHVSHSLITMYAR
        + +YA   F +I  P+ Y +N MIRG S + N    AL FY  M   G  P+  T+P++  ACS L  ++ G   H  V+K G + + +VS  L+ MY  
Subjt:  DFAYASDFFSNILDPTEYSFNVMIRGLSTTWNKSSLALEFYSRMKFLGLKPNKLTYPFLFIACSNLLAVEDGRVGHCSVIKRGLDEDGHVSHSLITMYAR

Query:  CGQVSHARKVFDEIPEKDLVSWNSMISGYSKMRHAGEAVGLFREMMEAGFQPNEMTLVSVLGACGELGDLELGTWVEEFV--------VENKMVLNSFIG
        CG+V++  +VF++IP+ ++V+W S+ISG+       +A+  FREM   G + NE  +V +L ACG   D+  G W   F+         ++K+  N  + 
Subjt:  CGQVSHARKVFDEIPEKDLVSWNSMISGYSKMRHAGEAVGLFREMMEAGFQPNEMTLVSVLGACGELGDLELGTWVEEFV--------VENKMVLNSFIG

Query:  SALIHMYGKCGDLVSARRIFDSMKKKDKVTWNAMITG
        ++LI MY KCGDL +AR +FD M ++  V+WN++ITG
Subjt:  SALIHMYGKCGDLVSARRIFDSMKKKDKVTWNAMITG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTCACAAACTCAATTCACAAACCCAGTTCCTTTCTCTACAAGATCGTCGACCTCAAAGATTTCGCCTATGCCTCGGATTTCTTCTCCAACATTCTCGACCCCACCGA
GTACTCTTTCAATGTCATGATTCGTGGTCTCTCGACGACTTGGAATAAGTCTTCTCTTGCCCTTGAATTCTATTCTCGAATGAAATTTCTGGGTTTGAAACCCAATAAGC
TCACCTACCCATTTCTGTTTATTGCGTGTTCCAATCTTTTGGCTGTTGAAGATGGGCGGGTGGGTCATTGTTCTGTGATTAAACGTGGGTTGGACGAGGATGGTCATGTG
AGTCATTCTTTGATTACGATGTATGCGCGGTGTGGGCAAGTGAGTCATGCTCGGAAGGTGTTTGATGAAATTCCTGAGAAGGATTTGGTTTCGTGGAACTCTATGATTTC
GGGTTACTCGAAGATGAGGCATGCTGGTGAGGCTGTGGGTTTGTTTAGAGAGATGATGGAAGCTGGGTTTCAGCCCAATGAGATGACTTTAGTTAGTGTCTTGGGGGCGT
GTGGAGAGCTGGGGGATTTGGAACTTGGTACTTGGGTGGAGGAGTTTGTGGTCGAGAATAAGATGGTGTTGAATTCTTTTATAGGTTCTGCATTGATCCATATGTATGGG
AAGTGTGGTGATTTAGTGTCAGCAAGGAGGATTTTTGACTCTATGAAGAAGAAAGATAAAGTTACTTGGAATGCCATGATTACAGGGCAAGTGAATGACCACCTTCTCTT
TGAACCAATATTGTCAATATTGTCAATAGGTTAA
mRNA sequenceShow/hide mRNA sequence
ATGCTCACAAACTCAATTCACAAACCCAGTTCCTTTCTCTACAAGATCGTCGACCTCAAAGATTTCGCCTATGCCTCGGATTTCTTCTCCAACATTCTCGACCCCACCGA
GTACTCTTTCAATGTCATGATTCGTGGTCTCTCGACGACTTGGAATAAGTCTTCTCTTGCCCTTGAATTCTATTCTCGAATGAAATTTCTGGGTTTGAAACCCAATAAGC
TCACCTACCCATTTCTGTTTATTGCGTGTTCCAATCTTTTGGCTGTTGAAGATGGGCGGGTGGGTCATTGTTCTGTGATTAAACGTGGGTTGGACGAGGATGGTCATGTG
AGTCATTCTTTGATTACGATGTATGCGCGGTGTGGGCAAGTGAGTCATGCTCGGAAGGTGTTTGATGAAATTCCTGAGAAGGATTTGGTTTCGTGGAACTCTATGATTTC
GGGTTACTCGAAGATGAGGCATGCTGGTGAGGCTGTGGGTTTGTTTAGAGAGATGATGGAAGCTGGGTTTCAGCCCAATGAGATGACTTTAGTTAGTGTCTTGGGGGCGT
GTGGAGAGCTGGGGGATTTGGAACTTGGTACTTGGGTGGAGGAGTTTGTGGTCGAGAATAAGATGGTGTTGAATTCTTTTATAGGTTCTGCATTGATCCATATGTATGGG
AAGTGTGGTGATTTAGTGTCAGCAAGGAGGATTTTTGACTCTATGAAGAAGAAAGATAAAGTTACTTGGAATGCCATGATTACAGGGCAAGTGAATGACCACCTTCTCTT
TGAACCAATATTGTCAATATTGTCAATAGGTTAA
Protein sequenceShow/hide protein sequence
MLTNSIHKPSSFLYKIVDLKDFAYASDFFSNILDPTEYSFNVMIRGLSTTWNKSSLALEFYSRMKFLGLKPNKLTYPFLFIACSNLLAVEDGRVGHCSVIKRGLDEDGHV
SHSLITMYARCGQVSHARKVFDEIPEKDLVSWNSMISGYSKMRHAGEAVGLFREMMEAGFQPNEMTLVSVLGACGELGDLELGTWVEEFVVENKMVLNSFIGSALIHMYG
KCGDLVSARRIFDSMKKKDKVTWNAMITGQVNDHLLFEPILSILSIG