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HG10006216 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10006216
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionAuxin-responsive protein
Genome locationChr07:15938278..15938712
RNA-Seq ExpressionHG10006216
SyntenyHG10006216
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0009734 - auxin-activated signaling pathway (biological process)
GO:0005634 - nucleus (cellular component)
InterPro domainsIPR003311 - AUX/IAA protein
IPR033389 - AUX/IAA domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6586078.1 Auxin-responsive protein IAA33, partial [Cucurbita argyrosperma subsp. sororia]8.4e-5178.17Show/hide
Query:  MNAFQSRTTQSPAAAAAAAEYFKMRRWPERRLGPP-------QQAEEEGVEDFAAVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDD---
        MN F S T    AAAAAAAEYFKMRRWPE +LGPP       +  EEE  EDFAAVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDD   
Subjt:  MNAFQSRTTQSPAAAAAAAEYFKMRRWPERRLGPP-------QQAEEEGVEDFAAVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDD---

Query:  -GSGGGENSGERRLDLTNAVPGHIVAYEDIENDLLLAGDLNW
         G GGGE SG+R+LDL NAVPGH+VAYEDIENDLLLAGDLNW
Subjt:  -GSGGGENSGERRLDLTNAVPGHIVAYEDIENDLLLAGDLNW

KAG7020902.1 Auxin-responsive protein IAA33, partial [Cucurbita argyrosperma subsp. argyrosperma]5.8e-5279.02Show/hide
Query:  MNAFQSRTTQSPAAAAAAAEYFKMRRWPERRLGPP-------QQAEEEGVEDFAAVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDD---
        MNAF S T    AAAAAAAEYFKMRRWPE +LGPP       +  EEE  EDFAAVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDD   
Subjt:  MNAFQSRTTQSPAAAAAAAEYFKMRRWPERRLGPP-------QQAEEEGVEDFAAVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDD---

Query:  -GSGGGENSGERRLDLTNAVPGHIVAYEDIENDLLLAGDLNWK
         G GGGE SG+R+LDL NAVPGH+VAYEDIENDLLLAGDLNWK
Subjt:  -GSGGGENSGERRLDLTNAVPGHIVAYEDIENDLLLAGDLNWK

XP_022969694.1 auxin-responsive protein IAA33 [Cucurbita maxima]5.5e-5080.71Show/hide
Query:  MNAFQSRTTQSPAAAAAAAEYFKMRRWPERRLGPP-----QQAEEEGVEDFAAVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDDG----
        MN F S  TQSP AAAAAAEYFKMRRWPE +LGPP     QQ + E  EDFAAVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDDG    
Subjt:  MNAFQSRTTQSPAAAAAAAEYFKMRRWPERRLGPP-----QQAEEEGVEDFAAVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDDG----

Query:  SGGGENSGERRLDLTNAVPGHIVAYEDIENDLLLAGDLNW
         GGGE SG+R+LDL NAVPGH+VAYEDIENDLLLAGDLNW
Subjt:  SGGGENSGERRLDLTNAVPGHIVAYEDIENDLLLAGDLNW

XP_023538318.1 auxin-responsive protein IAA33 [Cucurbita pepo subsp. pepo]1.2e-5283.94Show/hide
Query:  MNAFQSRTTQSPAAAAAAAEYFKMRRWPERRLGPP------QQAEEEGVEDFAAVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDDGSGG
        MN F S  TQSPAAAAAAAEYFKMRRWPE +LGPP       + EEE  EDFAAVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDDG GG
Subjt:  MNAFQSRTTQSPAAAAAAAEYFKMRRWPERRLGPP------QQAEEEGVEDFAAVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDDGSGG

Query:  GENSGERRLDLTNAVPGHIVAYEDIENDLLLAGDLNW
        GE SGER+LDL NAVPGH+VAYEDIENDLLLAGDLNW
Subjt:  GENSGERRLDLTNAVPGHIVAYEDIENDLLLAGDLNW

XP_038890972.1 auxin-responsive protein IAA33 [Benincasa hispida]4.9e-5993.18Show/hide
Query:  MNAFQSRTTQSPAAAAAAAEYFKMRRWPERRLGPPQQAEEEGVEDFAAVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDD-GSGGGENSG
        MNAFQSRTTQSP AAAAAAE FKMRRWPERR+GPPQQAE EG EDFAAVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVDD+D G GGGENSG
Subjt:  MNAFQSRTTQSPAAAAAAAEYFKMRRWPERRLGPPQQAEEEGVEDFAAVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDD-GSGGGENSG

Query:  ERRLDLTNAVPGHIVAYEDIENDLLLAGDLNW
        ER+LDLTNAVPGHIVAYEDIENDLLLAGDLNW
Subjt:  ERRLDLTNAVPGHIVAYEDIENDLLLAGDLNW

TrEMBL top hitse value%identityAlignment
A0A1S3BRI6 Auxin-responsive protein3.2e-4886.99Show/hide
Query:  TQSPAAAAAAAEYFKMRRWPERRLGPPQQAEEEGVEDFAAVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDDGSGGGENSGERRLDLTNA
        TQSP AAAAAAEYFKM RW ERR+GPPQQAE    EDF+AVIPPVTVVLEGRAICQRISLHKH SYESLAKALRRMFVDDDD    GE SGERRLDLTNA
Subjt:  TQSPAAAAAAAEYFKMRRWPERRLGPPQQAEEEGVEDFAAVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDDGSGGGENSGERRLDLTNA

Query:  VPGHIVAYEDIENDLLLAGDLNW
        VPG+IVAYEDIENDLLLAGDLNW
Subjt:  VPGHIVAYEDIENDLLLAGDLNW

A0A5A7UPU6 Auxin-responsive protein2.2e-4984.33Show/hide
Query:  TQSPAAAAAAAEYFKMRRWPERRLGPPQQAEEEGVEDFAAVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDDGSGGGENSGERRLDLTNA
        TQSP AAAAAAEYFKM RW ERR+GPPQQAE    EDF+AVIPPVTVVLEGRAICQRISLHKH SYESLAKALRRMFVDDDD    GE SGERRLDLTNA
Subjt:  TQSPAAAAAAAEYFKMRRWPERRLGPPQQAEEEGVEDFAAVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDDGSGGGENSGERRLDLTNA

Query:  VPGHIVAYEDIENDLLLAGDLNWKLVLIILFFSL
        VPG+IVAYEDIENDLLLAGDLNWKLV  +  FSL
Subjt:  VPGHIVAYEDIENDLLLAGDLNWKLVLIILFFSL

A0A5D3BTE4 Auxin-responsive protein1.0e-4985.07Show/hide
Query:  TQSPAAAAAAAEYFKMRRWPERRLGPPQQAEEEGVEDFAAVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDDGSGGGENSGERRLDLTNA
        TQSP AAAAAAEYFKM RW ERR+GPPQQAE    EDFAAVIPPVTVVLEGRAICQRISLHKH SYESLAKALRRMFVDDDD    GE SGERRLDLTNA
Subjt:  TQSPAAAAAAAEYFKMRRWPERRLGPPQQAEEEGVEDFAAVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDDGSGGGENSGERRLDLTNA

Query:  VPGHIVAYEDIENDLLLAGDLNWKLVLIILFFSL
        VPG+IVAYEDIENDLLLAGDLNWKLV  +  FSL
Subjt:  VPGHIVAYEDIENDLLLAGDLNWKLVLIILFFSL

A0A6J1FIF6 Auxin-responsive protein3.6e-4775.17Show/hide
Query:  MNAFQSRTTQSPAAAAAAAEYFKMRRWPERRLGPP----------QQAEEEGVEDFAAVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDD
        MN F S  TQSP   AAAAEYFKMRRWPE +LG P          ++ EEE  EDFAAVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDD
Subjt:  MNAFQSRTTQSPAAAAAAAEYFKMRRWPERRLGPP----------QQAEEEGVEDFAAVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDD

Query:  ----GSGGGENSGERRLDLTNAVPGHIVAYEDIENDLLLAGDLNW
            G GGGE S +R+LDL NAVPGH+VAYEDIENDLLLAGDLNW
Subjt:  ----GSGGGENSGERRLDLTNAVPGHIVAYEDIENDLLLAGDLNW

A0A6J1I3D9 Auxin-responsive protein2.6e-5080.71Show/hide
Query:  MNAFQSRTTQSPAAAAAAAEYFKMRRWPERRLGPP-----QQAEEEGVEDFAAVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDDG----
        MN F S  TQSP AAAAAAEYFKMRRWPE +LGPP     QQ + E  EDFAAVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDDG    
Subjt:  MNAFQSRTTQSPAAAAAAAEYFKMRRWPERRLGPP-----QQAEEEGVEDFAAVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDDG----

Query:  SGGGENSGERRLDLTNAVPGHIVAYEDIENDLLLAGDLNW
         GGGE SG+R+LDL NAVPGH+VAYEDIENDLLLAGDLNW
Subjt:  SGGGENSGERRLDLTNAVPGHIVAYEDIENDLLLAGDLNW

SwissProt top hitse value%identityAlignment
P0C128 Auxin-responsive protein IAA254.3e-0535.71Show/hide
Query:  VTVVLEGRAICQRISLHKHASYESLAKALRRMFVDD-DDGSGGGENSGERRLDLTNAVPGHIVAYEDIENDLLLAGDLNWKLVL
        V V LEG A+ ++I L  H SY+SL++AL+ MF     DG    +N  ++  +   +   +++ YED E D +L GD+ W+L +
Subjt:  VTVVLEGRAICQRISLHKHASYESLAKALRRMFVDD-DDGSGGGENSGERRLDLTNAVPGHIVAYEDIENDLLLAGDLNWKLVL

Q38831 Auxin-responsive protein IAA137.8e-0732.53Show/hide
Query:  VTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDDGSGGGENSGERRLDLTNAVPGHIVAYEDIENDLLLAGDLNWKLVL
        + V ++G AI +++ L+ H+SYE+LA+ L  MF   + G+ G  +   + L L +     ++ YED E D +L GD+ W++ +
Subjt:  VTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDDGSGGGENSGERRLDLTNAVPGHIVAYEDIENDLLLAGDLNWKLVL

Q6K846 Auxin-responsive protein IAA91.1e-0537.04Show/hide
Query:  VTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDDGSGGGENSGERRL--DLTNAVPGHIVAYEDIENDLLLAGDLNW
        V V  EG AI +++ L  H+SY+ LA  L RMF  +D       + GE+++  D      G +V YED + D +L GD+ W
Subjt:  VTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDDGSGGGENSGERRL--DLTNAVPGHIVAYEDIENDLLLAGDLNW

Q9FKM7 Auxin-responsive protein IAA332.2e-2551.54Show/hide
Query:  QSRTTQSPAAAAAAAEYFKMRRWPERRLGPPQQAEEEGVED--FAAVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDDGSGGGENSGERR
        Q R T +P     A++            G   Q     VED   ++V+PPVTVVLEGR+ICQRISL KH SY+SLA ALR+MFVD  D +          
Subjt:  QSRTTQSPAAAAAAAEYFKMRRWPERRLGPPQQAEEEGVED--FAAVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDDGSGGGENSGERR

Query:  LDLTNAVPGHIVAYEDIENDLLLAGDLNWK
        LDL+NA+PGH++AYED+ENDLLLAGDL WK
Subjt:  LDLTNAVPGHIVAYEDIENDLLLAGDLNWK

Q9ZSY8 Auxin-responsive protein IAA273.6e-0429.73Show/hide
Query:  PPQQAEEEGVEDFAAVIPP---VTVVLEGRAICQRISLHKHASYESLAKALRRMF----VDDDDGSGGGENSGERRLDLTNAVPG--HIVAYEDIENDLL
        P   +E E  E  +    P   V V +EG    ++I L  + SY  L+ AL +MF    +      GG    G     LT+ + G  ++V YED ++D +
Subjt:  PPQQAEEEGVEDFAAVIPP---VTVVLEGRAICQRISLHKHASYESLAKALRRMF----VDDDDGSGGGENSGERRLDLTNAVPG--HIVAYEDIENDLL

Query:  LAGDLNWKLVL
        L GD+ W++ +
Subjt:  LAGDLNWKLVL

Arabidopsis top hitse value%identityAlignment
AT2G33310.1 auxin-induced protein 135.5e-0832.53Show/hide
Query:  VTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDDGSGGGENSGERRLDLTNAVPGHIVAYEDIENDLLLAGDLNWKLVL
        + V ++G AI +++ L+ H+SYE+LA+ L  MF   + G+ G  +   + L L +     ++ YED E D +L GD+ W++ +
Subjt:  VTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDDGSGGGENSGERRLDLTNAVPGHIVAYEDIENDLLLAGDLNWKLVL

AT2G33310.2 auxin-induced protein 135.5e-0832.53Show/hide
Query:  VTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDDGSGGGENSGERRLDLTNAVPGHIVAYEDIENDLLLAGDLNWKLVL
        + V ++G AI +++ L+ H+SYE+LA+ L  MF   + G+ G  +   + L L +     ++ YED E D +L GD+ W++ +
Subjt:  VTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDDGSGGGENSGERRLDLTNAVPGHIVAYEDIENDLLLAGDLNWKLVL

AT2G33310.3 auxin-induced protein 135.5e-0832.53Show/hide
Query:  VTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDDGSGGGENSGERRLDLTNAVPGHIVAYEDIENDLLLAGDLNWKLVL
        + V ++G AI +++ L+ H+SYE+LA+ L  MF   + G+ G  +   + L L +     ++ YED E D +L GD+ W++ +
Subjt:  VTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDDGSGGGENSGERRLDLTNAVPGHIVAYEDIENDLLLAGDLNWKLVL

AT4G29080.1 phytochrome-associated protein 22.6e-0529.73Show/hide
Query:  PPQQAEEEGVEDFAAVIPP---VTVVLEGRAICQRISLHKHASYESLAKALRRMF----VDDDDGSGGGENSGERRLDLTNAVPG--HIVAYEDIENDLL
        P   +E E  E  +    P   V V +EG    ++I L  + SY  L+ AL +MF    +      GG    G     LT+ + G  ++V YED ++D +
Subjt:  PPQQAEEEGVEDFAAVIPP---VTVVLEGRAICQRISLHKHASYESLAKALRRMF----VDDDDGSGGGENSGERRLDLTNAVPG--HIVAYEDIENDLL

Query:  LAGDLNWKLVL
        L GD+ W++ +
Subjt:  LAGDLNWKLVL

AT5G57420.1 indole-3-acetic acid inducible 331.5e-2651.54Show/hide
Query:  QSRTTQSPAAAAAAAEYFKMRRWPERRLGPPQQAEEEGVED--FAAVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDDGSGGGENSGERR
        Q R T +P     A++            G   Q     VED   ++V+PPVTVVLEGR+ICQRISL KH SY+SLA ALR+MFVD  D +          
Subjt:  QSRTTQSPAAAAAAAEYFKMRRWPERRLGPPQQAEEEGVED--FAAVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDDGSGGGENSGERR

Query:  LDLTNAVPGHIVAYEDIENDLLLAGDLNWK
        LDL+NA+PGH++AYED+ENDLLLAGDL WK
Subjt:  LDLTNAVPGHIVAYEDIENDLLLAGDLNWK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATGCTTTCCAGTCTCGAACGACACAATCCCCTGCTGCCGCCGCCGCCGCTGCAGAGTATTTCAAGATGAGGCGGTGGCCGGAGAGGAGACTGGGTCCGCCGCAGCA
GGCGGAGGAGGAGGGGGTGGAGGATTTTGCGGCGGTGATTCCGCCAGTGACGGTGGTGCTGGAAGGGAGGGCGATCTGTCAGCGGATCAGCCTCCACAAACATGCAAGCT
ACGAGAGCCTAGCCAAGGCTCTAAGACGGATGTTCGTCGACGATGACGACGGCAGCGGCGGTGGTGAAAACTCCGGCGAACGACGGCTGGACCTGACGAACGCGGTTCCG
GGTCATATTGTTGCTTATGAAGATATTGAAAATGATCTTCTTCTTGCTGGTGATCTCAACTGGAAGTTAGTACTCATCATCCTTTTTTTTTCTCTTTCCAATTAG
mRNA sequenceShow/hide mRNA sequence
ATGAATGCTTTCCAGTCTCGAACGACACAATCCCCTGCTGCCGCCGCCGCCGCTGCAGAGTATTTCAAGATGAGGCGGTGGCCGGAGAGGAGACTGGGTCCGCCGCAGCA
GGCGGAGGAGGAGGGGGTGGAGGATTTTGCGGCGGTGATTCCGCCAGTGACGGTGGTGCTGGAAGGGAGGGCGATCTGTCAGCGGATCAGCCTCCACAAACATGCAAGCT
ACGAGAGCCTAGCCAAGGCTCTAAGACGGATGTTCGTCGACGATGACGACGGCAGCGGCGGTGGTGAAAACTCCGGCGAACGACGGCTGGACCTGACGAACGCGGTTCCG
GGTCATATTGTTGCTTATGAAGATATTGAAAATGATCTTCTTCTTGCTGGTGATCTCAACTGGAAGTTAGTACTCATCATCCTTTTTTTTTCTCTTTCCAATTAG
Protein sequenceShow/hide protein sequence
MNAFQSRTTQSPAAAAAAAEYFKMRRWPERRLGPPQQAEEEGVEDFAAVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDDGSGGGENSGERRLDLTNAVP
GHIVAYEDIENDLLLAGDLNWKLVLIILFFSLSN