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HG10006221 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10006221
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionTransmembrane protein
Genome locationChr07:15982979..15983278
RNA-Seq ExpressionHG10006221
SyntenyHG10006221
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0055589.1 hypothetical protein E6C27_scaffold222G00710 [Cucumis melo var. makuwa]6.4e-4291.92Show/hide
Query:  MADRRLSGSILTAMFLLASSSISSEMEGLMDGVDHWMRSTAAVTSNVAISVADKIGLISLYGMVILYGYVVTTVFYCECRKRDFVRVENEEDRDHIVMV
        MADRRLSGSILTAMFL ASS ISSEMEGLMDGVDHWMRSTAAVT+NVA+SV DKIGLISLYGMVI++GYVVTTVFYCECRKRDFVRVENEED DHIVMV
Subjt:  MADRRLSGSILTAMFLLASSSISSEMEGLMDGVDHWMRSTAAVTSNVAISVADKIGLISLYGMVILYGYVVTTVFYCECRKRDFVRVENEEDRDHIVMV

KAE8652471.1 hypothetical protein Csa_014189 [Cucumis sativus]1.4e-4190.91Show/hide
Query:  MADRRLSGSILTAMFLLASSSISSEMEGLMDGVDHWMRSTAAVTSNVAISVADKIGLISLYGMVILYGYVVTTVFYCECRKRDFVRVENEEDRDHIVMV
        MADRRLSGSILTAMFL+ SS ISSEMEGLMDGVDHWMRSTAAVT+NVA+SV DKIGLISLYGMVI++GYVVTTVFYCECRKRDFVRVENEED DHIVMV
Subjt:  MADRRLSGSILTAMFLLASSSISSEMEGLMDGVDHWMRSTAAVTSNVAISVADKIGLISLYGMVILYGYVVTTVFYCECRKRDFVRVENEEDRDHIVMV

XP_022997441.1 uncharacterized protein LOC111492360 [Cucurbita maxima]1.3e-3989.9Show/hide
Query:  MADRRLSGSILTAMFLLASSSISSEMEGLMDGVDHWMRSTAAVTSNVAISVADKIGLISLYGMVILYGYVVTTVFYCECRKRDFVRVENEEDRDHIVMV
        MADRRLSGSILTAMFLLASSSIS EMEGLMDGVDHWMR+TAAVTSNVAI V DK+GLISLYGMVI+ GYVVTTVFYCECRK+DFVRVENEED DHIV V
Subjt:  MADRRLSGSILTAMFLLASSSISSEMEGLMDGVDHWMRSTAAVTSNVAISVADKIGLISLYGMVILYGYVVTTVFYCECRKRDFVRVENEEDRDHIVMV

XP_023546373.1 uncharacterized protein LOC111805502 [Cucurbita pepo subsp. pepo]1.3e-3989.9Show/hide
Query:  MADRRLSGSILTAMFLLASSSISSEMEGLMDGVDHWMRSTAAVTSNVAISVADKIGLISLYGMVILYGYVVTTVFYCECRKRDFVRVENEEDRDHIVMV
        MADRRLSGSILTAMFLLASSSIS EMEGLMDGVDHWMR+TAAVTSNVAI V DK+GLISLYGMVI+ GYVVTTVFYCECRK+DFVRVENEED DHIV V
Subjt:  MADRRLSGSILTAMFLLASSSISSEMEGLMDGVDHWMRSTAAVTSNVAISVADKIGLISLYGMVILYGYVVTTVFYCECRKRDFVRVENEEDRDHIVMV

XP_038889309.1 uncharacterized protein LOC120079221 [Benincasa hispida]1.1e-4192.93Show/hide
Query:  MADRRLSGSILTAMFLLASSSISSEMEGLMDGVDHWMRSTAAVTSNVAISVADKIGLISLYGMVILYGYVVTTVFYCECRKRDFVRVENEEDRDHIVMV
        MADR+L GSILTAMFLLASSSISSEMEGLMDGVDHWMRSTAAVTSNV I V DKIGLISLYGMVI+ GYVVTTVFYCECRKRDFVRVENEEDRDHIVMV
Subjt:  MADRRLSGSILTAMFLLASSSISSEMEGLMDGVDHWMRSTAAVTSNVAISVADKIGLISLYGMVILYGYVVTTVFYCECRKRDFVRVENEEDRDHIVMV

TrEMBL top hitse value%identityAlignment
A0A0A0LV14 Uncharacterized protein6.9e-4290.91Show/hide
Query:  MADRRLSGSILTAMFLLASSSISSEMEGLMDGVDHWMRSTAAVTSNVAISVADKIGLISLYGMVILYGYVVTTVFYCECRKRDFVRVENEEDRDHIVMV
        MADRRLSGSILTAMFL+ SS ISSEMEGLMDGVDHWMRSTAAVT+NVA+SV DKIGLISLYGMVI++GYVVTTVFYCECRKRDFVRVENEED DHIVMV
Subjt:  MADRRLSGSILTAMFLLASSSISSEMEGLMDGVDHWMRSTAAVTSNVAISVADKIGLISLYGMVILYGYVVTTVFYCECRKRDFVRVENEEDRDHIVMV

A0A5A7UQ45 Uncharacterized protein3.1e-4291.92Show/hide
Query:  MADRRLSGSILTAMFLLASSSISSEMEGLMDGVDHWMRSTAAVTSNVAISVADKIGLISLYGMVILYGYVVTTVFYCECRKRDFVRVENEEDRDHIVMV
        MADRRLSGSILTAMFL ASS ISSEMEGLMDGVDHWMRSTAAVT+NVA+SV DKIGLISLYGMVI++GYVVTTVFYCECRKRDFVRVENEED DHIVMV
Subjt:  MADRRLSGSILTAMFLLASSSISSEMEGLMDGVDHWMRSTAAVTSNVAISVADKIGLISLYGMVILYGYVVTTVFYCECRKRDFVRVENEEDRDHIVMV

A0A5N6R735 Uncharacterized protein2.2e-1652.22Show/hide
Query:  MADRRLSGSILTAMFLLASSSISSEMEGLMDGVDHWMRSTAAVTSNVAISVADKIGLISLYGMVILYGYVVTTVFYCECRKRDFVRVENE
        MA RRLSG +L+ +F+L S +IS +++ +MDG+D  + ST +    VA  V DK+GLI LYG+V+++ Y+VTTVFYCECRKR   R E E
Subjt:  MADRRLSGSILTAMFLLASSSISSEMEGLMDGVDHWMRSTAAVTSNVAISVADKIGLISLYGMVILYGYVVTTVFYCECRKRDFVRVENE

A0A6J1K518 uncharacterized protein LOC1114923606.5e-4089.9Show/hide
Query:  MADRRLSGSILTAMFLLASSSISSEMEGLMDGVDHWMRSTAAVTSNVAISVADKIGLISLYGMVILYGYVVTTVFYCECRKRDFVRVENEEDRDHIVMV
        MADRRLSGSILTAMFLLASSSIS EMEGLMDGVDHWMR+TAAVTSNVAI V DK+GLISLYGMVI+ GYVVTTVFYCECRK+DFVRVENEED DHIV V
Subjt:  MADRRLSGSILTAMFLLASSSISSEMEGLMDGVDHWMRSTAAVTSNVAISVADKIGLISLYGMVILYGYVVTTVFYCECRKRDFVRVENEEDRDHIVMV

A0A7N2L164 Uncharacterized protein3.0e-1347.78Show/hide
Query:  MADRRLSGSILTAMFLLASSSISSEMEGLMDGVDHWMRSTAAVTSNVAISVADKIGLISLYGMVILYGYVVTTVFYCECRKRDFVRVENE
        MA RR+SG +L+ +F+L S +I+ ++E ++DG D  + S+ +    V   V +K+GLI LYG+V+L+ Y+V TVFYCECRKR   RVE+E
Subjt:  MADRRLSGSILTAMFLLASSSISSEMEGLMDGVDHWMRSTAAVTSNVAISVADKIGLISLYGMVILYGYVVTTVFYCECRKRDFVRVENE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G16850.1 unknown protein1.9e-0740.24Show/hide
Query:  MADRRLSGSILTAMFLLASSSISSEMEGLMDGVDHWMRSTAAVTSNVAISVADKIGLISLYGMVILYGYVVTTVFYCECRKR
        M  RR++G  L  +F+  SS I   ME L   +D  + S +   S V     D   L+ +YG  ++  YVV TVFYCECRKR
Subjt:  MADRRLSGSILTAMFLLASSSISSEMEGLMDGVDHWMRSTAAVTSNVAISVADKIGLISLYGMVILYGYVVTTVFYCECRKR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGATCGGAGATTGAGCGGTTCGATTCTTACGGCGATGTTTCTTCTTGCGTCGAGTTCGATCTCGTCGGAGATGGAAGGGCTTATGGACGGCGTTGATCATTGGAT
GAGGTCGACGGCAGCGGTGACGTCGAATGTGGCGATCAGCGTCGCGGACAAGATCGGGTTAATTTCTCTGTACGGTATGGTAATTCTTTACGGGTATGTGGTAACTACGG
TTTTTTACTGCGAGTGTAGAAAGAGGGATTTTGTTAGGGTGGAAAATGAAGAGGATCGTGATCATATCGTCATGGTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCTGATCGGAGATTGAGCGGTTCGATTCTTACGGCGATGTTTCTTCTTGCGTCGAGTTCGATCTCGTCGGAGATGGAAGGGCTTATGGACGGCGTTGATCATTGGAT
GAGGTCGACGGCAGCGGTGACGTCGAATGTGGCGATCAGCGTCGCGGACAAGATCGGGTTAATTTCTCTGTACGGTATGGTAATTCTTTACGGGTATGTGGTAACTACGG
TTTTTTACTGCGAGTGTAGAAAGAGGGATTTTGTTAGGGTGGAAAATGAAGAGGATCGTGATCATATCGTCATGGTTTAG
Protein sequenceShow/hide protein sequence
MADRRLSGSILTAMFLLASSSISSEMEGLMDGVDHWMRSTAAVTSNVAISVADKIGLISLYGMVILYGYVVTTVFYCECRKRDFVRVENEEDRDHIVMV