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HG10006241 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10006241
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionADP-ribosylation factor 1
Genome locationChr07:16361501..16362667
RNA-Seq ExpressionHG10006241
SyntenyHG10006241
Gene Ontology termsGO:0006886 - intracellular protein transport (biological process)
GO:0016192 - vesicle-mediated transport (biological process)
GO:0005794 - Golgi apparatus (cellular component)
GO:0003924 - GTPase activity (molecular function)
GO:0005525 - GTP binding (molecular function)
InterPro domainsIPR006689 - Small GTPase superfamily, ARF/SAR type
IPR027417 - P-loop containing nucleoside triphosphate hydrolase


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG2286277.1 hypothetical protein Bca52824_045881 [Brassica carinata]1.4e-3097.18Show/hide
Query:  MGILFTRMFSSLFGNKEARILVLGLDNAGKTTILYRLQMGEVVSTIPTIGFNVETVQYNNIKFQVWDLGKP
        MGILFTRMFSS+FGNKEARILVLGLDNAGKTTILYRLQMGEVVSTIPTIGFNVETVQYNNIKFQVWDLG P
Subjt:  MGILFTRMFSSLFGNKEARILVLGLDNAGKTTILYRLQMGEVVSTIPTIGFNVETVQYNNIKFQVWDLGKP

KAG2308260.1 hypothetical protein Bca52824_028008 [Brassica carinata]1.8e-3097.18Show/hide
Query:  MGILFTRMFSSLFGNKEARILVLGLDNAGKTTILYRLQMGEVVSTIPTIGFNVETVQYNNIKFQVWDLGKP
        MGILFTRMFSS+FGNKEARILVLGLDNAGKTTILYRLQMGEVVSTIPTIGFNVETVQYNNIKFQVWDLG P
Subjt:  MGILFTRMFSSLFGNKEARILVLGLDNAGKTTILYRLQMGEVVSTIPTIGFNVETVQYNNIKFQVWDLGKP

RQO91841.1 hypothetical protein POPTR_006G171501 [Populus trichocarpa]2.4e-3094.44Show/hide
Query:  MGILFTRMFSSLFGNKEARILVLGLDNAGKTTILYRLQMGEVVSTIPTIGFNVETVQYNNIKFQVWDLGKPI
        MGI F++MFSS+FGNKEARILVLGLDNAGKTTILYRLQMGEVVSTIPTIGFNVETVQYNNIKFQVWDLGKPI
Subjt:  MGILFTRMFSSLFGNKEARILVLGLDNAGKTTILYRLQMGEVVSTIPTIGFNVETVQYNNIKFQVWDLGKPI

XP_017983776.1 PREDICTED: ADP-ribosylation factor 1 [Theobroma cacao]5.4e-30100Show/hide
Query:  MGILFTRMFSSLFGNKEARILVLGLDNAGKTTILYRLQMGEVVSTIPTIGFNVETVQYNNIKFQVWDLG
        MGILFTRMFSSLFGNKEARILVLGLDNAGKTTILYRLQMGEVVSTIPTIGFNVETVQYNNIKFQVWDLG
Subjt:  MGILFTRMFSSLFGNKEARILVLGLDNAGKTTILYRLQMGEVVSTIPTIGFNVETVQYNNIKFQVWDLG

XP_022997467.1 ADP-ribosylation factor 1-like [Cucurbita maxima]5.4e-30100Show/hide
Query:  MGILFTRMFSSLFGNKEARILVLGLDNAGKTTILYRLQMGEVVSTIPTIGFNVETVQYNNIKFQVWDLG
        MGILFTRMFSSLFGNKEARILVLGLDNAGKTTILYRLQMGEVVSTIPTIGFNVETVQYNNIKFQVWDLG
Subjt:  MGILFTRMFSSLFGNKEARILVLGLDNAGKTTILYRLQMGEVVSTIPTIGFNVETVQYNNIKFQVWDLG

TrEMBL top hitse value%identityAlignment
A0A061GRG1 ADP-ribosylation factor 3 isoform 12.6e-30100Show/hide
Query:  MGILFTRMFSSLFGNKEARILVLGLDNAGKTTILYRLQMGEVVSTIPTIGFNVETVQYNNIKFQVWDLG
        MGILFTRMFSSLFGNKEARILVLGLDNAGKTTILYRLQMGEVVSTIPTIGFNVETVQYNNIKFQVWDLG
Subjt:  MGILFTRMFSSLFGNKEARILVLGLDNAGKTTILYRLQMGEVVSTIPTIGFNVETVQYNNIKFQVWDLG

A0A3N7FZC6 Uncharacterized protein1.2e-3094.44Show/hide
Query:  MGILFTRMFSSLFGNKEARILVLGLDNAGKTTILYRLQMGEVVSTIPTIGFNVETVQYNNIKFQVWDLGKPI
        MGI F++MFSS+FGNKEARILVLGLDNAGKTTILYRLQMGEVVSTIPTIGFNVETVQYNNIKFQVWDLGKPI
Subjt:  MGILFTRMFSSLFGNKEARILVLGLDNAGKTTILYRLQMGEVVSTIPTIGFNVETVQYNNIKFQVWDLGKPI

A0A6J0ZLX3 ADP-ribosylation factor 12.6e-30100Show/hide
Query:  MGILFTRMFSSLFGNKEARILVLGLDNAGKTTILYRLQMGEVVSTIPTIGFNVETVQYNNIKFQVWDLG
        MGILFTRMFSSLFGNKEARILVLGLDNAGKTTILYRLQMGEVVSTIPTIGFNVETVQYNNIKFQVWDLG
Subjt:  MGILFTRMFSSLFGNKEARILVLGLDNAGKTTILYRLQMGEVVSTIPTIGFNVETVQYNNIKFQVWDLG

A0A6J1EP05 ADP-ribosylation factor 1-like2.6e-30100Show/hide
Query:  MGILFTRMFSSLFGNKEARILVLGLDNAGKTTILYRLQMGEVVSTIPTIGFNVETVQYNNIKFQVWDLG
        MGILFTRMFSSLFGNKEARILVLGLDNAGKTTILYRLQMGEVVSTIPTIGFNVETVQYNNIKFQVWDLG
Subjt:  MGILFTRMFSSLFGNKEARILVLGLDNAGKTTILYRLQMGEVVSTIPTIGFNVETVQYNNIKFQVWDLG

A0A6J1KDZ9 ADP-ribosylation factor 1-like2.6e-30100Show/hide
Query:  MGILFTRMFSSLFGNKEARILVLGLDNAGKTTILYRLQMGEVVSTIPTIGFNVETVQYNNIKFQVWDLG
        MGILFTRMFSSLFGNKEARILVLGLDNAGKTTILYRLQMGEVVSTIPTIGFNVETVQYNNIKFQVWDLG
Subjt:  MGILFTRMFSSLFGNKEARILVLGLDNAGKTTILYRLQMGEVVSTIPTIGFNVETVQYNNIKFQVWDLG

SwissProt top hitse value%identityAlignment
P40616 ADP-ribosylation factor-like protein 15.4e-2578.26Show/hide
Query:  MGILFTRMFSSLFGNKEARILVLGLDNAGKTTILYRLQMGEVVSTIPTIGFNVETVQYNNIKFQVWDLG
        MG  F+ +FSSLFG +E RIL+LGLD AGKTTILYRLQ+GEVV+TIPTIGFNVETV Y N+KFQVWDLG
Subjt:  MGILFTRMFSSLFGNKEARILVLGLDNAGKTTILYRLQMGEVVSTIPTIGFNVETVQYNNIKFQVWDLG

P40940 ADP-ribosylation factor 31.6e-3298.55Show/hide
Query:  MGILFTRMFSSLFGNKEARILVLGLDNAGKTTILYRLQMGEVVSTIPTIGFNVETVQYNNIKFQVWDLG
        MGILFTRMFSS+FGNKEARILVLGLDNAGKTTILYRLQMGEVVSTIPTIGFNVETVQYNNIKFQVWDLG
Subjt:  MGILFTRMFSSLFGNKEARILVLGLDNAGKTTILYRLQMGEVVSTIPTIGFNVETVQYNNIKFQVWDLG

P61211 ADP-ribosylation factor-like protein 15.4e-2578.26Show/hide
Query:  MGILFTRMFSSLFGNKEARILVLGLDNAGKTTILYRLQMGEVVSTIPTIGFNVETVQYNNIKFQVWDLG
        MG  F+ +FSSLFG +E RIL+LGLD AGKTTILYRLQ+GEVV+TIPTIGFNVETV Y N+KFQVWDLG
Subjt:  MGILFTRMFSSLFGNKEARILVLGLDNAGKTTILYRLQMGEVVSTIPTIGFNVETVQYNNIKFQVWDLG

Q2YDM1 ADP-ribosylation factor-like protein 15.4e-2578.26Show/hide
Query:  MGILFTRMFSSLFGNKEARILVLGLDNAGKTTILYRLQMGEVVSTIPTIGFNVETVQYNNIKFQVWDLG
        MG  F+ +FSSLFG +E RIL+LGLD AGKTTILYRLQ+GEVV+TIPTIGFNVETV Y N+KFQVWDLG
Subjt:  MGILFTRMFSSLFGNKEARILVLGLDNAGKTTILYRLQMGEVVSTIPTIGFNVETVQYNNIKFQVWDLG

Q96361 ADP-ribosylation factor 11.6e-3298.55Show/hide
Query:  MGILFTRMFSSLFGNKEARILVLGLDNAGKTTILYRLQMGEVVSTIPTIGFNVETVQYNNIKFQVWDLG
        MGILFTRMFSS+FGNKEARILVLGLDNAGKTTILYRLQMGEVVSTIPTIGFNVETVQYNNIKFQVWDLG
Subjt:  MGILFTRMFSSLFGNKEARILVLGLDNAGKTTILYRLQMGEVVSTIPTIGFNVETVQYNNIKFQVWDLG

Arabidopsis top hitse value%identityAlignment
AT1G23490.1 ADP-ribosylation factor 12.3e-2368.12Show/hide
Query:  MGILFTRMFSSLFGNKEARILVLGLDNAGKTTILYRLQMGEVVSTIPTIGFNVETVQYNNIKFQVWDLG
        MG+ F ++FS LF  KE RIL++GLD AGKTTILY+L++GE+V+TIPTIGFNVETV+Y NI F VWD+G
Subjt:  MGILFTRMFSSLFGNKEARILVLGLDNAGKTTILYRLQMGEVVSTIPTIGFNVETVQYNNIKFQVWDLG

AT1G70490.1 Ras-related small GTP-binding family protein2.3e-2368.12Show/hide
Query:  MGILFTRMFSSLFGNKEARILVLGLDNAGKTTILYRLQMGEVVSTIPTIGFNVETVQYNNIKFQVWDLG
        MG+ F ++FS LF  KE RIL++GLD AGKTTILY+L++GE+V+TIPTIGFNVETV+Y NI F VWD+G
Subjt:  MGILFTRMFSSLFGNKEARILVLGLDNAGKTTILYRLQMGEVVSTIPTIGFNVETVQYNNIKFQVWDLG

AT2G24765.1 ADP-ribosylation factor 31.1e-3398.55Show/hide
Query:  MGILFTRMFSSLFGNKEARILVLGLDNAGKTTILYRLQMGEVVSTIPTIGFNVETVQYNNIKFQVWDLG
        MGILFTRMFSS+FGNKEARILVLGLDNAGKTTILYRLQMGEVVSTIPTIGFNVETVQYNNIKFQVWDLG
Subjt:  MGILFTRMFSSLFGNKEARILVLGLDNAGKTTILYRLQMGEVVSTIPTIGFNVETVQYNNIKFQVWDLG

AT2G24765.2 ADP-ribosylation factor 31.1e-3398.55Show/hide
Query:  MGILFTRMFSSLFGNKEARILVLGLDNAGKTTILYRLQMGEVVSTIPTIGFNVETVQYNNIKFQVWDLG
        MGILFTRMFSS+FGNKEARILVLGLDNAGKTTILYRLQMGEVVSTIPTIGFNVETVQYNNIKFQVWDLG
Subjt:  MGILFTRMFSSLFGNKEARILVLGLDNAGKTTILYRLQMGEVVSTIPTIGFNVETVQYNNIKFQVWDLG

AT5G14670.1 ADP-ribosylation factor A1B8.0e-2469.57Show/hide
Query:  MGILFTRMFSSLFGNKEARILVLGLDNAGKTTILYRLQMGEVVSTIPTIGFNVETVQYNNIKFQVWDLG
        MG+ FT++FS LF  KE RIL++GLD AGKTTILY+L++GE+V+TIPTIGFNVETV+Y NI F VWD+G
Subjt:  MGILFTRMFSSLFGNKEARILVLGLDNAGKTTILYRLQMGEVVSTIPTIGFNVETVQYNNIKFQVWDLG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGATTTTGTTTACTCGAATGTTTTCTTCGCTTTTCGGGAATAAGGAAGCTCGGATCCTTGTTCTTGGCCTCGATAATGCCGGGAAAACTACAATTCTCTATCGGCT
CCAGATGGGGGAAGTTGTCTCGACTATTCCAACAATTGGATTTAATGTCGAAACTGTTCAGTACAATAATATCAAATTCCAGGTCTGGGATCTTGGTAAGCCAATTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGGGATTTTGTTTACTCGAATGTTTTCTTCGCTTTTCGGGAATAAGGAAGCTCGGATCCTTGTTCTTGGCCTCGATAATGCCGGGAAAACTACAATTCTCTATCGGCT
CCAGATGGGGGAAGTTGTCTCGACTATTCCAACAATTGGATTTAATGTCGAAACTGTTCAGTACAATAATATCAAATTCCAGGTCTGGGATCTTGGTAAGCCAATTTAG
Protein sequenceShow/hide protein sequence
MGILFTRMFSSLFGNKEARILVLGLDNAGKTTILYRLQMGEVVSTIPTIGFNVETVQYNNIKFQVWDLGKPI