CuGenDBv2

Gene ID	HG10006281
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	nuclear pore complex protein NUP43
Genome location	Chr07:16865064..16870160
RNA-Seq Expression	HG10006281
Synteny	HG10006281
Gene Ontology terms	GO:0031080 - nuclear pore outer ring (cellular component) GO:0005515 - protein binding (molecular function)
InterPro domains	IPR015943 - WD40/YVTN repeat-like-containing domain superfamily IPR036322 - WD40-repeat-containing domain superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6586038.1 Nuclear pore complex protein NUP43, partial [Cucurbita argyrosperma subsp. sororia]

7.0e-192

92.86

Show/hide

Query:  MATVSPQQQPQIHRFPQFKYVDGVRWLPPLSAFSRFAVIALFDSDSDSSSIEIHSVAQKPLDIAPHSTWISPSRVSSLKTSQLYQNPLVFASTYTGSLHV
        MA VSPQQQPQIHRFPQFKYVDGVRWLPPLSAF RFAV+ALFDSDSDSSSIEIHS+ Q PLD+AP S W SPSR+SSLKTSQ YQNPLVFASTYTGSLHV
Subjt:  MATVSPQQQPQIHRFPQFKYVDGVRWLPPLSAFSRFAVIALFDSDSDSSSIEIHSVAQKPLDIAPHSTWISPSRVSSLKTSQLYQNPLVFASTYTGSLHV

Query:  LSVEPMEASLDSELSVPEKMLHDGPISFVDVMDGGGECLTVSEDGRVNLVSVGESGLNYRRIFDSNGLVSYTAVKWASPTEFATGGCGFSLQWWDQRKPG
        LSVEPM+ASLDSELSVPEK+LHD PIS VDVMDGGGECLTV+EDGRVNLVSVGESGLNYRRIFDSNGLVSYTA KWASPTEFATGGCGFSLQWWDQRKPG
Subjt:  LSVEPMEASLDSELSVPEKMLHDGPISFVDVMDGGGECLTVSEDGRVNLVSVGESGLNYRRIFDSNGLVSYTAVKWASPTEFATGGCGFSLQWWDQRKPG

Query:  GAVSQFKADWASGMVHCIDIHPSRKHTCLAGGSFGTVFAWDLRSQQQPIILSGLEGSKTSNPSPCESEVWEVHYDPYIKSGNLGGMSSSQILPAMICSED
        GAVSQFK DWASG+VHCIDIHPSRKHTCLAGGSFGT FAWDLR QQQPIILSGLEGSKTSN SPCESEVWEVHYDPYIKSGN+GGMSSSQILPAMICSED
Subjt:  GAVSQFKADWASGMVHCIDIHPSRKHTCLAGGSFGTVFAWDLRSQQQPIILSGLEGSKTSNPSPCESEVWEVHYDPYIKSGNLGGMSSSQILPAMICSED

Query:  GILTSIEQGKQPVELLAEPCAINGFDIDRQHPSEVICNLEWESVAILSRP
        GI+TSIEQGKQPVELLAEPCAINGFDIDRQHPSEVICNLEWESVAILSRP
Subjt:  GILTSIEQGKQPVELLAEPCAINGFDIDRQHPSEVICNLEWESVAILSRP

XP_004144716.1 nuclear pore complex protein NUP43 [Cucumis sativus]

1.4e-195

94.86

Show/hide

Query:  MATVSPQQQPQIHRFPQFKYVDGVRWLPPLSAFSRFAVIALFDSDSDSSSIEIHSVAQKPLDIAPHSTWISPSRVSSLKTSQLYQNPLVFASTYTGSLHV
        MA  SPQQQPQIHRFPQFKYVDGVRWLPPLSAFSRFAVIALFDSDSDSSSIEIHS+ Q PLDI PHSTWISPSRVSSLKTSQL++NPLVFASTYTGSLHV
Subjt:  MATVSPQQQPQIHRFPQFKYVDGVRWLPPLSAFSRFAVIALFDSDSDSSSIEIHSVAQKPLDIAPHSTWISPSRVSSLKTSQLYQNPLVFASTYTGSLHV

Query:  LSVEPMEASLDSELSVPEKMLHDGPISFVDVMDGGGECLTVSEDGRVNLVSVGESGLNYRRIFDSNGLVSYTAVKWASPTEFATGGCGFSLQWWDQRKPG
        LSVEPMEASLDSELSVPEKMLHDGPIS VDVMDGGGECLTVSEDGRV+LVSVGESGL+YRRIFDSNGLVSY AVKWASPTEF TGGCGFSLQWWDQRKPG
Subjt:  LSVEPMEASLDSELSVPEKMLHDGPISFVDVMDGGGECLTVSEDGRVNLVSVGESGLNYRRIFDSNGLVSYTAVKWASPTEFATGGCGFSLQWWDQRKPG

Query:  GAVSQFKADWASGMVHCIDIHPSRKHTCLAGGSFGTVFAWDLRSQQQPIILSGLEGSKTSNPSPCESEVWEVHYDPYIKSGNLGGMSSSQILPAMICSED
        GAVSQFKA+WASG+VHCIDIHPSRKHTCLAGGSFGTVFAWDLRSQQQPIILSGLEGSKTSNPSPCESEVWEVHYDPYIKSGNLGGMSS+QILPAMICSED
Subjt:  GAVSQFKADWASGMVHCIDIHPSRKHTCLAGGSFGTVFAWDLRSQQQPIILSGLEGSKTSNPSPCESEVWEVHYDPYIKSGNLGGMSSSQILPAMICSED

Query:  GILTSIEQGKQPVELLAEPCAINGFDIDRQHPSEVICNLEWESVAILSRP
        GILTSIEQGK+PVELLAEPCAINGFDI+RQHPSEVICNLEWESVAILSRP
Subjt:  GILTSIEQGKQPVELLAEPCAINGFDIDRQHPSEVICNLEWESVAILSRP

XP_008452472.1 PREDICTED: nuclear pore complex protein NUP43 [Cucumis melo]

6.1e-196

95.13

Show/hide

Query:  MATVSPQQQPQIHRFPQFKYVDGVRWLPPLSAFSRFAVIALFDSDSDSSSIEIHSVAQKPLDIAPHSTWISPSRVSSLKTSQLYQNPLVFASTYTGSLHV
        MA +SPQQQPQIHRFPQFKYVDGVRWLPPLSAF+RFAVIALFDSD DSSSIEIHS+ Q PLDIAPHSTW+SPSRVSSLKTSQL+QNPLVFASTYTGSLHV
Subjt:  MATVSPQQQPQIHRFPQFKYVDGVRWLPPLSAFSRFAVIALFDSDSDSSSIEIHSVAQKPLDIAPHSTWISPSRVSSLKTSQLYQNPLVFASTYTGSLHV

Query:  LSVEPMEASLDSELSVPEKMLHDGPISFVDVMDGGGECLTVSEDGRVNLVSVGESGLNYRRIFDSNGLVSYTAVKWASPTEFATGGCGFSLQWWDQRKPG
        LSVEPMEASLDSELSVPEKMLHDGPIS VDVMD GGECLTVSEDGRVNLVSVGESGLNYRRIFDSNGLVSY AVKWASPTEF TGGCGFSLQWWDQRKPG
Subjt:  LSVEPMEASLDSELSVPEKMLHDGPISFVDVMDGGGECLTVSEDGRVNLVSVGESGLNYRRIFDSNGLVSYTAVKWASPTEFATGGCGFSLQWWDQRKPG

Query:  GAVSQFKADWASGMVHCIDIHPSRKHTCLAGGSFGTVFAWDLRSQQQPIILSGLEGSKTSNPSPCESEVWEVHYDPYIKSGNLGGMSSSQILPAMICSED
        GAVSQFKADWASG+VHCIDIHPSRKHTCLAGGSFGTVFAWDLRSQQQPIILSGLEG+KTSNPSPCESEVWEVHYDPYIKSGNLGGMSS+QILPAMICSED
Subjt:  GAVSQFKADWASGMVHCIDIHPSRKHTCLAGGSFGTVFAWDLRSQQQPIILSGLEGSKTSNPSPCESEVWEVHYDPYIKSGNLGGMSSSQILPAMICSED

Query:  GILTSIEQGKQPVELLAEPCAINGFDIDRQHPSEVICNLEWESVAILSR
        GILTSIEQGK+PVELLAEPCAINGFDIDRQHPSEVICNLEWESVAILSR
Subjt:  GILTSIEQGKQPVELLAEPCAINGFDIDRQHPSEVICNLEWESVAILSR

XP_022937892.1 nuclear pore complex protein NUP43 [Cucurbita moschata]

3.1e-192

93.14

Show/hide

Query:  MATVSPQQQPQIHRFPQFKYVDGVRWLPPLSAFSRFAVIALFDSDSDSSSIEIHSVAQKPLDIAPHSTWISPSRVSSLKTSQLYQNPLVFASTYTGSLHV
        MA VSPQQQPQIHRFPQFKYVDGVRWLPPLSAF RFAV+ALFDSDSDSSSIEIHS+ Q PLD+AP S W SPSR+SSLKTSQ YQNPLVFASTYTGSLHV
Subjt:  MATVSPQQQPQIHRFPQFKYVDGVRWLPPLSAFSRFAVIALFDSDSDSSSIEIHSVAQKPLDIAPHSTWISPSRVSSLKTSQLYQNPLVFASTYTGSLHV

Query:  LSVEPMEASLDSELSVPEKMLHDGPISFVDVMDGGGECLTVSEDGRVNLVSVGESGLNYRRIFDSNGLVSYTAVKWASPTEFATGGCGFSLQWWDQRKPG
        LSVEPM+ASLDSELSVPEK+LHD PIS VDVMDGGGECLTV+EDGRVNLVSVGESGLNYRRIFDSNGLVSYTA KWASPTEFATGGCGFSLQWWDQRKPG
Subjt:  LSVEPMEASLDSELSVPEKMLHDGPISFVDVMDGGGECLTVSEDGRVNLVSVGESGLNYRRIFDSNGLVSYTAVKWASPTEFATGGCGFSLQWWDQRKPG

Query:  GAVSQFKADWASGMVHCIDIHPSRKHTCLAGGSFGTVFAWDLRSQQQPIILSGLEGSKTSNPSPCESEVWEVHYDPYIKSGNLGGMSSSQILPAMICSED
        GAVSQFK DWASG+VHCIDIHPSRKHTCLAGGSFGTVFAWDLR QQQPIILSGLEGSKTSN SPCESEVWEVHYDPYIKSGN+GGMSSSQILPAMICSED
Subjt:  GAVSQFKADWASGMVHCIDIHPSRKHTCLAGGSFGTVFAWDLRSQQQPIILSGLEGSKTSNPSPCESEVWEVHYDPYIKSGNLGGMSSSQILPAMICSED

Query:  GILTSIEQGKQPVELLAEPCAINGFDIDRQHPSEVICNLEWESVAILSRP
        GI+TSIEQGKQPVELLAEPCAINGFDIDRQHPSEVICNLEWESVAILSRP
Subjt:  GILTSIEQGKQPVELLAEPCAINGFDIDRQHPSEVICNLEWESVAILSRP

XP_038889924.1 nuclear pore complex protein NUP43 [Benincasa hispida]

2.8e-193

94.84

Show/hide

Query:  MATVSPQQQPQIHRFPQFKYVDGVRWLPPLSAFSRFAVIALFDSDSDSSSIEIHSVAQKPLDIAPHSTWISPSRVSSLKTSQLYQNPLVFASTYTGSLHV
        MA VSPQQQPQIHRFPQFKYVDGVRWL  LS FSR AVIALFDSDSDSSSIEIHS+ QKPLDIAPHSTW SPSRVSSLKTSQLYQNPLVFASTYTGSLHV
Subjt:  MATVSPQQQPQIHRFPQFKYVDGVRWLPPLSAFSRFAVIALFDSDSDSSSIEIHSVAQKPLDIAPHSTWISPSRVSSLKTSQLYQNPLVFASTYTGSLHV

Query:  LSVEPMEASLDSELSVPEKMLHDGPISFVDVMDGGGECLTVSEDGRVNLVSVGESGLNYRRIFDSNGLVSYTAVKWASPTEFATGGCGFSLQWWDQRKPG
        LSVEPMEA+LDSELSVPEKMLHD PIS VDVMDGGGECLTVSEDGRVNLVS+GESGLNY RIFDSNGLVSYTAVKWASPTEFATGGCGFSLQWWDQRKPG
Subjt:  LSVEPMEASLDSELSVPEKMLHDGPISFVDVMDGGGECLTVSEDGRVNLVSVGESGLNYRRIFDSNGLVSYTAVKWASPTEFATGGCGFSLQWWDQRKPG

Query:  GAVSQFKADWASGMVHCIDIHPSRKHTCLAGGSFGTVFAWDLRSQQQPIILSGLEGSKTSNPSPCESEVWEVHYDPYIKSGNLGGMSSSQILPAMICSED
        GAVSQFKADWASG+VH IDIHPSRKHTCLAGGSFGTVFAWDLRSQQQPIILSGLEGSKTSNPSPCESEVWEVHYDPYIKSGNLGGMSSSQILPAMICSED
Subjt:  GAVSQFKADWASGMVHCIDIHPSRKHTCLAGGSFGTVFAWDLRSQQQPIILSGLEGSKTSNPSPCESEVWEVHYDPYIKSGNLGGMSSSQILPAMICSED

Query:  GILTSIEQGKQPVELLAEPCAINGFDIDRQHPSEVICNLEWESVAILSR
        GILTSIEQGKQPV+LLAEPCAINGFDIDR HPSEVICNLEWES+AILSR
Subjt:  GILTSIEQGKQPVELLAEPCAINGFDIDRQHPSEVICNLEWESVAILSR

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LJ46 Uncharacterized protein

6.6e-196

94.86

Show/hide

Query:  MATVSPQQQPQIHRFPQFKYVDGVRWLPPLSAFSRFAVIALFDSDSDSSSIEIHSVAQKPLDIAPHSTWISPSRVSSLKTSQLYQNPLVFASTYTGSLHV
        MA  SPQQQPQIHRFPQFKYVDGVRWLPPLSAFSRFAVIALFDSDSDSSSIEIHS+ Q PLDI PHSTWISPSRVSSLKTSQL++NPLVFASTYTGSLHV
Subjt:  MATVSPQQQPQIHRFPQFKYVDGVRWLPPLSAFSRFAVIALFDSDSDSSSIEIHSVAQKPLDIAPHSTWISPSRVSSLKTSQLYQNPLVFASTYTGSLHV

Query:  LSVEPMEASLDSELSVPEKMLHDGPISFVDVMDGGGECLTVSEDGRVNLVSVGESGLNYRRIFDSNGLVSYTAVKWASPTEFATGGCGFSLQWWDQRKPG
        LSVEPMEASLDSELSVPEKMLHDGPIS VDVMDGGGECLTVSEDGRV+LVSVGESGL+YRRIFDSNGLVSY AVKWASPTEF TGGCGFSLQWWDQRKPG
Subjt:  LSVEPMEASLDSELSVPEKMLHDGPISFVDVMDGGGECLTVSEDGRVNLVSVGESGLNYRRIFDSNGLVSYTAVKWASPTEFATGGCGFSLQWWDQRKPG

Query:  GAVSQFKADWASGMVHCIDIHPSRKHTCLAGGSFGTVFAWDLRSQQQPIILSGLEGSKTSNPSPCESEVWEVHYDPYIKSGNLGGMSSSQILPAMICSED
        GAVSQFKA+WASG+VHCIDIHPSRKHTCLAGGSFGTVFAWDLRSQQQPIILSGLEGSKTSNPSPCESEVWEVHYDPYIKSGNLGGMSS+QILPAMICSED
Subjt:  GAVSQFKADWASGMVHCIDIHPSRKHTCLAGGSFGTVFAWDLRSQQQPIILSGLEGSKTSNPSPCESEVWEVHYDPYIKSGNLGGMSSSQILPAMICSED

Query:  GILTSIEQGKQPVELLAEPCAINGFDIDRQHPSEVICNLEWESVAILSRP
        GILTSIEQGK+PVELLAEPCAINGFDI+RQHPSEVICNLEWESVAILSRP
Subjt:  GILTSIEQGKQPVELLAEPCAINGFDIDRQHPSEVICNLEWESVAILSRP

A0A1S3BTA6 nuclear pore complex protein NUP43

3.0e-196

95.13

Show/hide

Query:  MATVSPQQQPQIHRFPQFKYVDGVRWLPPLSAFSRFAVIALFDSDSDSSSIEIHSVAQKPLDIAPHSTWISPSRVSSLKTSQLYQNPLVFASTYTGSLHV
        MA +SPQQQPQIHRFPQFKYVDGVRWLPPLSAF+RFAVIALFDSD DSSSIEIHS+ Q PLDIAPHSTW+SPSRVSSLKTSQL+QNPLVFASTYTGSLHV
Subjt:  MATVSPQQQPQIHRFPQFKYVDGVRWLPPLSAFSRFAVIALFDSDSDSSSIEIHSVAQKPLDIAPHSTWISPSRVSSLKTSQLYQNPLVFASTYTGSLHV

Query:  LSVEPMEASLDSELSVPEKMLHDGPISFVDVMDGGGECLTVSEDGRVNLVSVGESGLNYRRIFDSNGLVSYTAVKWASPTEFATGGCGFSLQWWDQRKPG
        LSVEPMEASLDSELSVPEKMLHDGPIS VDVMD GGECLTVSEDGRVNLVSVGESGLNYRRIFDSNGLVSY AVKWASPTEF TGGCGFSLQWWDQRKPG
Subjt:  LSVEPMEASLDSELSVPEKMLHDGPISFVDVMDGGGECLTVSEDGRVNLVSVGESGLNYRRIFDSNGLVSYTAVKWASPTEFATGGCGFSLQWWDQRKPG

Query:  GAVSQFKADWASGMVHCIDIHPSRKHTCLAGGSFGTVFAWDLRSQQQPIILSGLEGSKTSNPSPCESEVWEVHYDPYIKSGNLGGMSSSQILPAMICSED
        GAVSQFKADWASG+VHCIDIHPSRKHTCLAGGSFGTVFAWDLRSQQQPIILSGLEG+KTSNPSPCESEVWEVHYDPYIKSGNLGGMSS+QILPAMICSED
Subjt:  GAVSQFKADWASGMVHCIDIHPSRKHTCLAGGSFGTVFAWDLRSQQQPIILSGLEGSKTSNPSPCESEVWEVHYDPYIKSGNLGGMSSSQILPAMICSED

Query:  GILTSIEQGKQPVELLAEPCAINGFDIDRQHPSEVICNLEWESVAILSR
        GILTSIEQGK+PVELLAEPCAINGFDIDRQHPSEVICNLEWESVAILSR
Subjt:  GILTSIEQGKQPVELLAEPCAINGFDIDRQHPSEVICNLEWESVAILSR

A0A5D3BAS9 Nuclear pore complex protein NUP43

3.0e-196

95.13

Show/hide

Query:  MATVSPQQQPQIHRFPQFKYVDGVRWLPPLSAFSRFAVIALFDSDSDSSSIEIHSVAQKPLDIAPHSTWISPSRVSSLKTSQLYQNPLVFASTYTGSLHV
        MA +SPQQQPQIHRFPQFKYVDGVRWLPPLSAF+RFAVIALFDSD DSSSIEIHS+ Q PLDIAPHSTW+SPSRVSSLKTSQL+QNPLVFASTYTGSLHV
Subjt:  MATVSPQQQPQIHRFPQFKYVDGVRWLPPLSAFSRFAVIALFDSDSDSSSIEIHSVAQKPLDIAPHSTWISPSRVSSLKTSQLYQNPLVFASTYTGSLHV

Query:  LSVEPMEASLDSELSVPEKMLHDGPISFVDVMDGGGECLTVSEDGRVNLVSVGESGLNYRRIFDSNGLVSYTAVKWASPTEFATGGCGFSLQWWDQRKPG
        LSVEPMEASLDSELSVPEKMLHDGPIS VDVMD GGECLTVSEDGRVNLVSVGESGLNYRRIFDSNGLVSY AVKWASPTEF TGGCGFSLQWWDQRKPG
Subjt:  LSVEPMEASLDSELSVPEKMLHDGPISFVDVMDGGGECLTVSEDGRVNLVSVGESGLNYRRIFDSNGLVSYTAVKWASPTEFATGGCGFSLQWWDQRKPG

Query:  GAVSQFKADWASGMVHCIDIHPSRKHTCLAGGSFGTVFAWDLRSQQQPIILSGLEGSKTSNPSPCESEVWEVHYDPYIKSGNLGGMSSSQILPAMICSED
        GAVSQFKADWASG+VHCIDIHPSRKHTCLAGGSFGTVFAWDLRSQQQPIILSGLEG+KTSNPSPCESEVWEVHYDPYIKSGNLGGMSS+QILPAMICSED
Subjt:  GAVSQFKADWASGMVHCIDIHPSRKHTCLAGGSFGTVFAWDLRSQQQPIILSGLEGSKTSNPSPCESEVWEVHYDPYIKSGNLGGMSSSQILPAMICSED

Query:  GILTSIEQGKQPVELLAEPCAINGFDIDRQHPSEVICNLEWESVAILSR
        GILTSIEQGK+PVELLAEPCAINGFDIDRQHPSEVICNLEWESVAILSR
Subjt:  GILTSIEQGKQPVELLAEPCAINGFDIDRQHPSEVICNLEWESVAILSR

A0A6J1FCG9 nuclear pore complex protein NUP43

1.5e-192

93.14

Show/hide

Query:  MATVSPQQQPQIHRFPQFKYVDGVRWLPPLSAFSRFAVIALFDSDSDSSSIEIHSVAQKPLDIAPHSTWISPSRVSSLKTSQLYQNPLVFASTYTGSLHV
        MA VSPQQQPQIHRFPQFKYVDGVRWLPPLSAF RFAV+ALFDSDSDSSSIEIHS+ Q PLD+AP S W SPSR+SSLKTSQ YQNPLVFASTYTGSLHV
Subjt:  MATVSPQQQPQIHRFPQFKYVDGVRWLPPLSAFSRFAVIALFDSDSDSSSIEIHSVAQKPLDIAPHSTWISPSRVSSLKTSQLYQNPLVFASTYTGSLHV

Query:  LSVEPMEASLDSELSVPEKMLHDGPISFVDVMDGGGECLTVSEDGRVNLVSVGESGLNYRRIFDSNGLVSYTAVKWASPTEFATGGCGFSLQWWDQRKPG
        LSVEPM+ASLDSELSVPEK+LHD PIS VDVMDGGGECLTV+EDGRVNLVSVGESGLNYRRIFDSNGLVSYTA KWASPTEFATGGCGFSLQWWDQRKPG
Subjt:  LSVEPMEASLDSELSVPEKMLHDGPISFVDVMDGGGECLTVSEDGRVNLVSVGESGLNYRRIFDSNGLVSYTAVKWASPTEFATGGCGFSLQWWDQRKPG

Query:  GAVSQFKADWASGMVHCIDIHPSRKHTCLAGGSFGTVFAWDLRSQQQPIILSGLEGSKTSNPSPCESEVWEVHYDPYIKSGNLGGMSSSQILPAMICSED
        GAVSQFK DWASG+VHCIDIHPSRKHTCLAGGSFGTVFAWDLR QQQPIILSGLEGSKTSN SPCESEVWEVHYDPYIKSGN+GGMSSSQILPAMICSED
Subjt:  GAVSQFKADWASGMVHCIDIHPSRKHTCLAGGSFGTVFAWDLRSQQQPIILSGLEGSKTSNPSPCESEVWEVHYDPYIKSGNLGGMSSSQILPAMICSED

Query:  GILTSIEQGKQPVELLAEPCAINGFDIDRQHPSEVICNLEWESVAILSRP
        GI+TSIEQGKQPVELLAEPCAINGFDIDRQHPSEVICNLEWESVAILSRP
Subjt:  GILTSIEQGKQPVELLAEPCAINGFDIDRQHPSEVICNLEWESVAILSRP

A0A6J1HYH3 nuclear pore complex protein NUP43

1.6e-189

91.43

Show/hide

Query:  MATVSPQQQPQIHRFPQFKYVDGVRWLPPLSAFSRFAVIALFDSDSDSSSIEIHSVAQKPLDIAPHSTWISPSRVSSLKTSQLYQNPLVFASTYTGSLHV
        MA VSPQQQPQIHRFPQFKY+DGVRWLPPLSAF RFAV+ALFDSDSDSSSIEIHS+ Q PLD+AP S W SPSR+SSLKTSQ YQNPLVFASTYTGSLHV
Subjt:  MATVSPQQQPQIHRFPQFKYVDGVRWLPPLSAFSRFAVIALFDSDSDSSSIEIHSVAQKPLDIAPHSTWISPSRVSSLKTSQLYQNPLVFASTYTGSLHV

Query:  LSVEPMEASLDSELSVPEKMLHDGPISFVDVMDGGGECLTVSEDGRVNLVSVGESGLNYRRIFDSNGLVSYTAVKWASPTEFATGGCGFSLQWWDQRKPG
        LSVEPM+ASLDSELSVPEK+LHD PIS VDVMD GGECLTV+EDGRVNLVSVGESGLNYRRIFDSNGLVSYTA KWASPTEFATGGCGFSLQWWDQRKPG
Subjt:  LSVEPMEASLDSELSVPEKMLHDGPISFVDVMDGGGECLTVSEDGRVNLVSVGESGLNYRRIFDSNGLVSYTAVKWASPTEFATGGCGFSLQWWDQRKPG

Query:  GAVSQFKADWASGMVHCIDIHPSRKHTCLAGGSFGTVFAWDLRSQQQPIILSGLEGSKTSNPSPCESEVWEVHYDPYIKSGNLGGMSSSQILPAMICSED
        GAV QFK DWASG+VHC+DIHPSRKHTCLAGGSFGTVFAWDLR QQQPIILSGLEGSKTSN SPCESEVWEV YDPYIKSGN+GGMSSSQILPAMICSED
Subjt:  GAVSQFKADWASGMVHCIDIHPSRKHTCLAGGSFGTVFAWDLRSQQQPIILSGLEGSKTSNPSPCESEVWEVHYDPYIKSGNLGGMSSSQILPAMICSED

Query:  GILTSIEQGKQPVELLAEPCAINGFDIDRQHPSEVICNLEWESVAILSRP
        GI+TSIEQGKQPVELLAEPCAINGFDID QHPSEVICNLEWESVAILSRP
Subjt:  GILTSIEQGKQPVELLAEPCAINGFDIDRQHPSEVICNLEWESVAILSRP

SwissProt top hits

e value

%identity

Alignment

Q24JJ9 Nuclear pore complex protein NUP43

1.3e-108

58.01

Show/hide

Query:  QQQPQIHRFPQFKYVDGVRWLPPLSAFSRFAVIALFDSDSDSSSIEIHSVAQKPLD-------IAPHSTWISPSRVSSLKTSQL-----YQNPLVFASTY
        Q   Q+HR PQ KYVDGVRWLP  SA +RF   A +D+D DSSSIEI S+   P         I   S+W SPSRVSSL+ +          P+V A+T 
Subjt:  QQQPQIHRFPQFKYVDGVRWLPPLSAFSRFAVIALFDSDSDSSSIEIHSVAQKPLD-------IAPHSTWISPSRVSSLKTSQL-----YQNPLVFASTY

Query:  TGSLHVLSVEPMEASLDSELSVPE-KMLHDGPISFVDVMDGGGECLTVSEDGRVNLVS-VGESGLNYRRIFDSNGLVSYTAVKWASPTEFATGGCGFSLQ
        +GSLHVL ++ +E +   E    E +  H G +  VD  + GGEC+TV EDGRVN+V  V   GL YR++FD NGLV+Y AVKWASPTEF TGG GF LQ
Subjt:  TGSLHVLSVEPMEASLDSELSVPE-KMLHDGPISFVDVMDGGGECLTVSEDGRVNLVS-VGESGLNYRRIFDSNGLVSYTAVKWASPTEFATGGCGFSLQ

Query:  WWDQRKPGGAVSQFKADW----ASGMVHCIDIHPSRKHTCLAGGSFGTVFAWDLRSQQQPIILSGLEGSKTSNPSPCESEVWEVHYDPYIKSGNLGGMSS
         WDQRK G AVSQ K +W     S +VH IDIHPSRKHTC+AGGS GTVFAWDLR  QQPI+LSG+  S+  N    ESEVWEV YD Y KS     +SS
Subjt:  WWDQRKPGGAVSQFKADW----ASGMVHCIDIHPSRKHTCLAGGSFGTVFAWDLRSQQQPIILSGLEGSKTSNPSPCESEVWEVHYDPYIKSGNLGGMSS

Query:  SQILPAMICSEDGILTSIEQGKQPVELLAEPCAINGFDIDRQHPSEVICNLEWESVAILSRP
        S+ILP M CSEDGIL  IEQG++P+ELLAEPCAIN FDIDRQ+P +VIC+LEWES+A+ SRP
Subjt:  SQILPAMICSEDGILTSIEQGKQPVELLAEPCAINGFDIDRQHPSEVICNLEWESVAILSRP

Arabidopsis top hits

e value

%identity

Alignment

AT4G30840.1 Transducin/WD40 repeat-like superfamily protein

9.3e-110

58.01

Show/hide

Query:  QQQPQIHRFPQFKYVDGVRWLPPLSAFSRFAVIALFDSDSDSSSIEIHSVAQKPLD-------IAPHSTWISPSRVSSLKTSQL-----YQNPLVFASTY
        Q   Q+HR PQ KYVDGVRWLP  SA +RF   A +D+D DSSSIEI S+   P         I   S+W SPSRVSSL+ +          P+V A+T 
Subjt:  QQQPQIHRFPQFKYVDGVRWLPPLSAFSRFAVIALFDSDSDSSSIEIHSVAQKPLD-------IAPHSTWISPSRVSSLKTSQL-----YQNPLVFASTY

Query:  TGSLHVLSVEPMEASLDSELSVPE-KMLHDGPISFVDVMDGGGECLTVSEDGRVNLVS-VGESGLNYRRIFDSNGLVSYTAVKWASPTEFATGGCGFSLQ
        +GSLHVL ++ +E +   E    E +  H G +  VD  + GGEC+TV EDGRVN+V  V   GL YR++FD NGLV+Y AVKWASPTEF TGG GF LQ
Subjt:  TGSLHVLSVEPMEASLDSELSVPE-KMLHDGPISFVDVMDGGGECLTVSEDGRVNLVS-VGESGLNYRRIFDSNGLVSYTAVKWASPTEFATGGCGFSLQ

Query:  WWDQRKPGGAVSQFKADW----ASGMVHCIDIHPSRKHTCLAGGSFGTVFAWDLRSQQQPIILSGLEGSKTSNPSPCESEVWEVHYDPYIKSGNLGGMSS
         WDQRK G AVSQ K +W     S +VH IDIHPSRKHTC+AGGS GTVFAWDLR  QQPI+LSG+  S+  N    ESEVWEV YD Y KS     +SS
Subjt:  WWDQRKPGGAVSQFKADW----ASGMVHCIDIHPSRKHTCLAGGSFGTVFAWDLRSQQQPIILSGLEGSKTSNPSPCESEVWEVHYDPYIKSGNLGGMSS

Query:  SQILPAMICSEDGILTSIEQGKQPVELLAEPCAINGFDIDRQHPSEVICNLEWESVAILSRP
        S+ILP M CSEDGIL  IEQG++P+ELLAEPCAIN FDIDRQ+P +VIC+LEWES+A+ SRP
Subjt:  SQILPAMICSEDGILTSIEQGKQPVELLAEPCAINGFDIDRQHPSEVICNLEWESVAILSRP

Sequences

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CDS sequence

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ATGGCGACAGTAAGTCCCCAACAGCAACCTCAAATCCACAGGTTTCCGCAATTCAAGTATGTTGATGGTGTTCGGTGGCTTCCACCGCTCTCCGCATTTAGCCGGTTTGC
CGTCATTGCCCTTTTCGACTCCGATTCCGACTCATCCTCCATTGAAATTCACTCGGTGGCTCAAAAGCCACTGGATATAGCTCCTCATTCGACATGGATATCACCTTCAA
GAGTATCTTCCCTTAAAACCTCTCAACTCTACCAAAATCCTCTTGTTTTCGCTTCGACTTATACAGGTTCTCTCCATGTTTTATCTGTCGAGCCAATGGAAGCGTCGCTC
GACTCGGAGCTCTCGGTGCCCGAGAAGATGTTGCACGACGGACCTATTTCATTTGTCGATGTGATGGATGGGGGAGGTGAATGTCTGACTGTTTCGGAAGATGGACGTGT
GAATTTGGTAAGCGTTGGGGAATCTGGATTGAATTATCGTCGGATATTCGATAGTAATGGGTTGGTGTCGTATACCGCGGTGAAATGGGCATCGCCTACTGAGTTTGCGA
CTGGAGGTTGTGGCTTTAGCTTGCAATGGTGGGATCAGAGGAAGCCCGGTGGAGCAGTTTCTCAGTTTAAGGCCGATTGGGCTTCTGGTATGGTTCACTGCATTGATATC
CATCCATCACGAAAGCATACTTGTTTGGCAGGGGGCTCTTTTGGTACAGTCTTTGCCTGGGATTTGAGGTCACAACAGCAGCCTATCATTCTTTCGGGTCTAGAAGGGAG
TAAAACATCAAATCCTTCGCCATGTGAAAGTGAGGTTTGGGAGGTTCACTATGATCCTTATATTAAGTCTGGCAACCTAGGTGGCATGTCATCTTCACAGATTTTACCTG
CTATGATCTGCTCTGAGGACGGGATTCTAACTAGTATTGAGCAAGGCAAGCAACCTGTGGAACTGCTGGCGGAACCATGTGCAATTAATGGTTTTGACATTGACCGTCAA
CACCCATCAGAAGTGATATGTAACTTGGAGTGGGAATCCGTTGCCATCCTGTCAAGACCTTGA

mRNA sequence

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Protein sequence

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MATVSPQQQPQIHRFPQFKYVDGVRWLPPLSAFSRFAVIALFDSDSDSSSIEIHSVAQKPLDIAPHSTWISPSRVSSLKTSQLYQNPLVFASTYTGSLHVLSVEPMEASL
DSELSVPEKMLHDGPISFVDVMDGGGECLTVSEDGRVNLVSVGESGLNYRRIFDSNGLVSYTAVKWASPTEFATGGCGFSLQWWDQRKPGGAVSQFKADWASGMVHCIDI
HPSRKHTCLAGGSFGTVFAWDLRSQQQPIILSGLEGSKTSNPSPCESEVWEVHYDPYIKSGNLGGMSSSQILPAMICSEDGILTSIEQGKQPVELLAEPCAINGFDIDRQ
HPSEVICNLEWESVAILSRP

HG10006281 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome