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HG10006314 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10006314
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionGlutamyl-tRNA synthetase
Genome locationChr07:17239259..17241425
RNA-Seq ExpressionHG10006314
SyntenyHG10006314
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6599154.1 hypothetical protein SDJN03_08932, partial [Cucurbita argyrosperma subsp. sororia]2.4e-1846.79Show/hide
Query:  MLESGHAENNISDVGCSGVNDDGDDEDDETRKTMAKTQI------------------------------------------------------GDDE--F
        MLESG+AEN++SDVGCSGVNDDGDDEDDE RK+MAK QI                                                        D+  F
Subjt:  MLESGHAENNISDVGCSGVNDDGDDEDDETRKTMAKTQI------------------------------------------------------GDDE--F

Query:  DDD---------RKMEI-DSKNGSPTDPNHRKFTYEMLKVLIEKNDFYSKESNPHL
        D            K+ I DSKNG PTDPNHRKF+ EMLKVLIEKNDFYSKESNPHL
Subjt:  DDD---------RKMEI-DSKNGSPTDPNHRKFTYEMLKVLIEKNDFYSKESNPHL

XP_008452984.1 PREDICTED: uncharacterized protein LOC103493824 [Cucumis melo]2.8e-2750.3Show/hide
Query:  MLESGHAENNISDVGCSGVNDDGDDEDDETRKTMAKTQIGDDEFDDDRKMEI------------------------------------------------
        MLES HAENNISDVGCSGVNDDGDDEDDETR TMAKTQI DDEFDDDRKME+                                                
Subjt:  MLESGHAENNISDVGCSGVNDDGDDEDDETRKTMAKTQIGDDEFDDDRKMEI------------------------------------------------

Query:  -------------------------------DSKNGSPTDPNHRKFTYEMLKVLIEKNDFYSKESNPHL
                                       DSKNGSPTDPNHRKFT EMLKVLIEKNDFYSKESNPHL
Subjt:  -------------------------------DSKNGSPTDPNHRKFTYEMLKVLIEKNDFYSKESNPHL

XP_011648888.1 uncharacterized protein LOC101216013 [Cucumis sativus]1.6e-2751.85Show/hide
Query:  MLESGHAENNISDVGCSGVNDDGDDEDDETRKTMAKTQIGDDEFDDDRKMEI------------------------------------------------
        MLES HAENNISDVGCSGVNDDGDDEDDETR TMAKTQI DDEFDDDRKME+                                                
Subjt:  MLESGHAENNISDVGCSGVNDDGDDEDDETRKTMAKTQIGDDEFDDDRKMEI------------------------------------------------

Query:  -------------------------DSKNGSPTDPNHRKFTYEMLKVLIEKNDFYSKESNPH
                                 DSKNGSPTDPNHRKFT EMLKVLIEKNDFYSKESNPH
Subjt:  -------------------------DSKNGSPTDPNHRKFTYEMLKVLIEKNDFYSKESNPH

XP_023545330.1 uncharacterized protein LOC111804772 [Cucurbita pepo subsp. pepo]1.8e-1844.59Show/hide
Query:  MLESGHAENNISDVGCSGVNDDGDDEDDETRKTMAKTQIGDDEFDDDR----------------------------------------------------
        MLESG+AEN++SDVGCSGVNDDGDDEDDE RK+MAK QI   +  + +                                                    
Subjt:  MLESGHAENNISDVGCSGVNDDGDDEDDETRKTMAKTQIGDDEFDDDR----------------------------------------------------

Query:  --------------KMEI-DSKNGSPTDPNHRKFTYEMLKVLIEKNDFYSKESNPHL
                      K+ I D KNG PTDPNHRKFT EMLKVLIEKNDFYSKESNPHL
Subjt:  --------------KMEI-DSKNGSPTDPNHRKFTYEMLKVLIEKNDFYSKESNPHL

XP_038890967.1 uncharacterized protein LOC120080390 [Benincasa hispida]5.2e-2650.62Show/hide
Query:  MLESGHAENNISDVGCSGVNDDGDDEDDETRKTMAKTQIGDDEFDDDRKMEI------------------------------------------------
        MLES HAENNISDVGCSG NDDGDDEDDETRKTMA TQI  DEFDDDRKME+                                                
Subjt:  MLESGHAENNISDVGCSGVNDDGDDEDDETRKTMAKTQIGDDEFDDDRKMEI------------------------------------------------

Query:  ------------------------DSKNGSPTDPNHRKFTYEMLKVLIEKNDFYSKESNPHL
                                DSKNGSPTDPN+RKFT EMLKVLIEKNDFYSKESNPHL
Subjt:  ------------------------DSKNGSPTDPNHRKFTYEMLKVLIEKNDFYSKESNPHL

TrEMBL top hitse value%identityAlignment
A0A0A0LH19 Uncharacterized protein7.9e-2851.85Show/hide
Query:  MLESGHAENNISDVGCSGVNDDGDDEDDETRKTMAKTQIGDDEFDDDRKMEI------------------------------------------------
        MLES HAENNISDVGCSGVNDDGDDEDDETR TMAKTQI DDEFDDDRKME+                                                
Subjt:  MLESGHAENNISDVGCSGVNDDGDDEDDETRKTMAKTQIGDDEFDDDRKMEI------------------------------------------------

Query:  -------------------------DSKNGSPTDPNHRKFTYEMLKVLIEKNDFYSKESNPH
                                 DSKNGSPTDPNHRKFT EMLKVLIEKNDFYSKESNPH
Subjt:  -------------------------DSKNGSPTDPNHRKFTYEMLKVLIEKNDFYSKESNPH

A0A1S3BWA1 uncharacterized protein LOC1034938241.3e-2750.3Show/hide
Query:  MLESGHAENNISDVGCSGVNDDGDDEDDETRKTMAKTQIGDDEFDDDRKMEI------------------------------------------------
        MLES HAENNISDVGCSGVNDDGDDEDDETR TMAKTQI DDEFDDDRKME+                                                
Subjt:  MLESGHAENNISDVGCSGVNDDGDDEDDETRKTMAKTQIGDDEFDDDRKMEI------------------------------------------------

Query:  -------------------------------DSKNGSPTDPNHRKFTYEMLKVLIEKNDFYSKESNPHL
                                       DSKNGSPTDPNHRKFT EMLKVLIEKNDFYSKESNPHL
Subjt:  -------------------------------DSKNGSPTDPNHRKFTYEMLKVLIEKNDFYSKESNPHL

A0A6J1DRZ8 uncharacterized protein LOC1110233071.6e-1745.34Show/hide
Query:  MLESGHAENNISDVGCSGVNDDGDDEDDETRKTMAKTQIGDDEFDDD-----------------------------------------------------
        MLESGHAE N+SDVGCSGVNDD DDEDDET KTMA  QIG D  DDD                                                     
Subjt:  MLESGHAENNISDVGCSGVNDDGDDEDDETRKTMAKTQIGDDEFDDD-----------------------------------------------------

Query:  --------------RKMEIDSKNGS-PTDPNHRKFTYEMLKVLIEKNDFYSKESNPHLVSK
                      +++  DSKNGS  TDPN+RKFT EMLK+LIEKNDFYSKE NPHL SK
Subjt:  --------------RKMEIDSKNGS-PTDPNHRKFTYEMLKVLIEKNDFYSKESNPHLVSK

A0A6J1G2R9 uncharacterized protein LOC1114502629.7e-1844.87Show/hide
Query:  MLESGHAENNISDVGCSGVNDDGDDEDDETRKTMAKTQI------------------------------------------GDDEFDDDR----------
        MLESG+AEN++SDVGCSGVNDD DDEDDE RK+MAK QI                                               D +R          
Subjt:  MLESGHAENNISDVGCSGVNDDGDDEDDETRKTMAKTQI------------------------------------------GDDEFDDDR----------

Query:  -------------KMEI-DSKNGSPTDPNHRKFTYEMLKVLIEKNDFYSKESNPHL
                     K+ I D KNG PTDPNHRKFT +MLKVLIEKNDFYSKESNPHL
Subjt:  -------------KMEI-DSKNGSPTDPNHRKFTYEMLKVLIEKNDFYSKESNPHL

A0A6J1KI22 uncharacterized protein LOC1114940222.5e-1846.79Show/hide
Query:  MLESGHAENNISDVGCSGVNDDGDDEDDETRKTMAKTQI------------------------------------------------------GDDE--F
        MLESG+AEN++SDVGCSGVNDDGDDED+E RK+MAK QI                                                        D+  F
Subjt:  MLESGHAENNISDVGCSGVNDDGDDEDDETRKTMAKTQI------------------------------------------------------GDDE--F

Query:  DDD---------RKMEI-DSKNGSPTDPNHRKFTYEMLKVLIEKNDFYSKESNPHL
        D            K+ I DSKNG PTDPNHRKFT EMLKVLIEKNDFYSKESNPHL
Subjt:  DDD---------RKMEI-DSKNGSPTDPNHRKFTYEMLKVLIEKNDFYSKESNPHL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G26720.1 unknown protein9.3e-0555.26Show/hide
Query:  DSKNGSP-TDPNHRKFTYEMLKVLIEKNDFYSKESNPH
        DS   SP +DPN  +F++EML+V++E NDF S E NPH
Subjt:  DSKNGSP-TDPNHRKFTYEMLKVLIEKNDFYSKESNPH


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGGAATCAGGACATGCTGAGAATAATATCTCAGATGTTGGTTGCAGTGGTGTTAATGACGATGGCGATGATGAAGATGACGAGACTCGTAAAACTATGGCGAAGAC
CCAAATCGGGGATGATGAGTTTGATGATGATCGAAAAATGGAGATTGATTCTAAGAATGGGTCTCCAACTGACCCTAATCACCGGAAGTTCACTTATGAAATGTTGAAAG
TTCTTATTGAGAAGAATGATTTCTATTCCAAAGAATCCAATCCTCACTTGGTTTCCAAGAAGCCTCATTTGCATTCGTTGCTATGTGATCAAATGCATGCAAATTTAATT
CAAGCGGCTAGCCTTAACCATCCCTTTTCCCTTGTTCATTCAACTAGCGACCAAGAAGTTATGGTGGAGGATGAAGTTGATGATTTCGATGAGGCCATTGCTAATGTTTG
TAACATTGGTTCAGAAAATCTGCATACTGATGAGAAGATGGAGATTTTTCTGGAGATCGTCATTGTTCTTTTGTTTGATGATAAACAATTTGGATTAGAGTTCCCTCCCT
CTTTCGAAGCTATTTCTATGAAGCCATGGACTTATTCGGGTCTCTCTAAGTCAAGTTTGTTGTCCTGCTTTCATTCTCCCTTCACTAAGGAAGATCTCTTTCAATATGGT
GCAGAAACCAAGATTACTTTTTATGAGATTAAGCCTAAAAATTAG
mRNA sequenceShow/hide mRNA sequence
ATGTTGGAATCAGGACATGCTGAGAATAATATCTCAGATGTTGGTTGCAGTGGTGTTAATGACGATGGCGATGATGAAGATGACGAGACTCGTAAAACTATGGCGAAGAC
CCAAATCGGGGATGATGAGTTTGATGATGATCGAAAAATGGAGATTGATTCTAAGAATGGGTCTCCAACTGACCCTAATCACCGGAAGTTCACTTATGAAATGTTGAAAG
TTCTTATTGAGAAGAATGATTTCTATTCCAAAGAATCCAATCCTCACTTGGTTTCCAAGAAGCCTCATTTGCATTCGTTGCTATGTGATCAAATGCATGCAAATTTAATT
CAAGCGGCTAGCCTTAACCATCCCTTTTCCCTTGTTCATTCAACTAGCGACCAAGAAGTTATGGTGGAGGATGAAGTTGATGATTTCGATGAGGCCATTGCTAATGTTTG
TAACATTGGTTCAGAAAATCTGCATACTGATGAGAAGATGGAGATTTTTCTGGAGATCGTCATTGTTCTTTTGTTTGATGATAAACAATTTGGATTAGAGTTCCCTCCCT
CTTTCGAAGCTATTTCTATGAAGCCATGGACTTATTCGGGTCTCTCTAAGTCAAGTTTGTTGTCCTGCTTTCATTCTCCCTTCACTAAGGAAGATCTCTTTCAATATGGT
GCAGAAACCAAGATTACTTTTTATGAGATTAAGCCTAAAAATTAG
Protein sequenceShow/hide protein sequence
MLESGHAENNISDVGCSGVNDDGDDEDDETRKTMAKTQIGDDEFDDDRKMEIDSKNGSPTDPNHRKFTYEMLKVLIEKNDFYSKESNPHLVSKKPHLHSLLCDQMHANLI
QAASLNHPFSLVHSTSDQEVMVEDEVDDFDEAIANVCNIGSENLHTDEKMEIFLEIVIVLLFDDKQFGLEFPPSFEAISMKPWTYSGLSKSSLLSCFHSPFTKEDLFQYG
AETKITFYEIKPKN