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HG10006323 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10006323
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description40S ribosomal protein S23-1
Genome locationChr07:17328266..17330467
RNA-Seq ExpressionHG10006323
SyntenyHG10006323
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022156333.1 uncharacterized protein LOC111023254 [Momordica charantia]6.4e-4592.16Show/hide
Query:  MALRRFLGFSDGELMRSDAKPCSQLMKQTAGLCTVGGGLAFWILCRLHYGLSSPRITVPRSLRWAACGAASMSATSALLVRLFSPECEPQNIAAYDKRKV
        MALRR LGFSDGE+MRSDA PC QLMKQTAGLCTVGGGLAFWILCRLHYG   PRITVPRSLRWAACGA SMSATSALLVRLFSPECEPQNIAAYDKRKV
Subjt:  MALRRFLGFSDGELMRSDAKPCSQLMKQTAGLCTVGGGLAFWILCRLHYGLSSPRITVPRSLRWAACGAASMSATSALLVRLFSPECEPQNIAAYDKRKV

Query:  VR
        VR
Subjt:  VR

XP_022937466.1 uncharacterized protein LOC111443868 [Cucurbita moschata]4.9e-4592.16Show/hide
Query:  MALRRFLGFSDGELMRSDAKPCSQLMKQTAGLCTVGGGLAFWILCRLHYGLSSPRITVPRSLRWAACGAASMSATSALLVRLFSPECEPQNIAAYDKRKV
        MALRRF GFSDGELMRSDAKPCSQLMKQTAGLCTVGGGLAFWILCRLHYG   PRITVPRSLRWAACGAASMSATSALLVRLFSPECEPQNIAAYDK + 
Subjt:  MALRRFLGFSDGELMRSDAKPCSQLMKQTAGLCTVGGGLAFWILCRLHYGLSSPRITVPRSLRWAACGAASMSATSALLVRLFSPECEPQNIAAYDKRKV

Query:  VR
         R
Subjt:  VR

XP_022969628.1 uncharacterized protein LOC111468599 [Cucurbita maxima]1.7e-4593.14Show/hide
Query:  MALRRFLGFSDGELMRSDAKPCSQLMKQTAGLCTVGGGLAFWILCRLHYGLSSPRITVPRSLRWAACGAASMSATSALLVRLFSPECEPQNIAAYDKRKV
        MALRRF GFSDGELMRSDAKPCSQLMKQTAGLCTVGGGLAFWILCRLHYG   PRITVPRSLRWAACGAASMSATSALLVRLFSPECEPQNIAAYDK K 
Subjt:  MALRRFLGFSDGELMRSDAKPCSQLMKQTAGLCTVGGGLAFWILCRLHYGLSSPRITVPRSLRWAACGAASMSATSALLVRLFSPECEPQNIAAYDKRKV

Query:  VR
         R
Subjt:  VR

XP_023538321.1 uncharacterized protein LOC111799138 [Cucurbita pepo subsp. pepo]3.8e-4592.16Show/hide
Query:  MALRRFLGFSDGELMRSDAKPCSQLMKQTAGLCTVGGGLAFWILCRLHYGLSSPRITVPRSLRWAACGAASMSATSALLVRLFSPECEPQNIAAYDKRKV
        MALRRF GFSDG+LMRSDAKPCSQLMKQTAGLCTVGGGLAFWILCRLHYG   PRITVPRSLRWAACGAASMSATSALLVRLFSPECEPQNIAAYDK K 
Subjt:  MALRRFLGFSDGELMRSDAKPCSQLMKQTAGLCTVGGGLAFWILCRLHYGLSSPRITVPRSLRWAACGAASMSATSALLVRLFSPECEPQNIAAYDKRKV

Query:  VR
         R
Subjt:  VR

XP_038889141.1 uncharacterized protein LOC120079031 [Benincasa hispida]5.2e-4795.1Show/hide
Query:  MALRRFLGFSDGELMRSDAKPCSQLMKQTAGLCTVGGGLAFWILCRLHYGLSSPRITVPRSLRWAACGAASMSATSALLVRLFSPECEPQNIAAYDKRKV
        MALRRFLGFSDGE+MRSDAKPCSQLMKQTAGLCTVGGGLAFWILCRLHYG   PRITVPRSLRWAACGAASMSATSALLVRLFSPECEPQNIAAYDKRKV
Subjt:  MALRRFLGFSDGELMRSDAKPCSQLMKQTAGLCTVGGGLAFWILCRLHYGLSSPRITVPRSLRWAACGAASMSATSALLVRLFSPECEPQNIAAYDKRKV

Query:  VR
        V+
Subjt:  VR

TrEMBL top hitse value%identityAlignment
A0A1S3BWM4 uncharacterized protein LOC1034939377.1e-4287Show/hide
Query:  MALRRFLGFSDGELMRSDAKPCSQLMKQTAGLCTVGGGLAFWILCRLHYGLSSPRITVPRSLRWAACGAASMSATSALLVRLFSPECEPQNIAAYDKRKV
        MALRR LGFSDGE+MRSDAKPCSQLMKQTAGLC+V G L FW+LCRLHYG   PRITVPRSLRWAACGAASMSATSALLVRLFSPECEPQNIAAYD+ K+
Subjt:  MALRRFLGFSDGELMRSDAKPCSQLMKQTAGLCTVGGGLAFWILCRLHYGLSSPRITVPRSLRWAACGAASMSATSALLVRLFSPECEPQNIAAYDKRKV

A0A5D3BBN9 40S ribosomal protein S23-17.1e-4287Show/hide
Query:  MALRRFLGFSDGELMRSDAKPCSQLMKQTAGLCTVGGGLAFWILCRLHYGLSSPRITVPRSLRWAACGAASMSATSALLVRLFSPECEPQNIAAYDKRKV
        MALRR LGFSDGE+MRSDAKPCSQLMKQTAGLC+V G L FW+LCRLHYG   PRITVPRSLRWAACGAASMSATSALLVRLFSPECEPQNIAAYD+ K+
Subjt:  MALRRFLGFSDGELMRSDAKPCSQLMKQTAGLCTVGGGLAFWILCRLHYGLSSPRITVPRSLRWAACGAASMSATSALLVRLFSPECEPQNIAAYDKRKV

A0A6J1DQC3 uncharacterized protein LOC1110232543.1e-4592.16Show/hide
Query:  MALRRFLGFSDGELMRSDAKPCSQLMKQTAGLCTVGGGLAFWILCRLHYGLSSPRITVPRSLRWAACGAASMSATSALLVRLFSPECEPQNIAAYDKRKV
        MALRR LGFSDGE+MRSDA PC QLMKQTAGLCTVGGGLAFWILCRLHYG   PRITVPRSLRWAACGA SMSATSALLVRLFSPECEPQNIAAYDKRKV
Subjt:  MALRRFLGFSDGELMRSDAKPCSQLMKQTAGLCTVGGGLAFWILCRLHYGLSSPRITVPRSLRWAACGAASMSATSALLVRLFSPECEPQNIAAYDKRKV

Query:  VR
        VR
Subjt:  VR

A0A6J1FAF1 uncharacterized protein LOC1114438682.4e-4592.16Show/hide
Query:  MALRRFLGFSDGELMRSDAKPCSQLMKQTAGLCTVGGGLAFWILCRLHYGLSSPRITVPRSLRWAACGAASMSATSALLVRLFSPECEPQNIAAYDKRKV
        MALRRF GFSDGELMRSDAKPCSQLMKQTAGLCTVGGGLAFWILCRLHYG   PRITVPRSLRWAACGAASMSATSALLVRLFSPECEPQNIAAYDK + 
Subjt:  MALRRFLGFSDGELMRSDAKPCSQLMKQTAGLCTVGGGLAFWILCRLHYGLSSPRITVPRSLRWAACGAASMSATSALLVRLFSPECEPQNIAAYDKRKV

Query:  VR
         R
Subjt:  VR

A0A6J1I1J3 uncharacterized protein LOC1114685998.2e-4693.14Show/hide
Query:  MALRRFLGFSDGELMRSDAKPCSQLMKQTAGLCTVGGGLAFWILCRLHYGLSSPRITVPRSLRWAACGAASMSATSALLVRLFSPECEPQNIAAYDKRKV
        MALRRF GFSDGELMRSDAKPCSQLMKQTAGLCTVGGGLAFWILCRLHYG   PRITVPRSLRWAACGAASMSATSALLVRLFSPECEPQNIAAYDK K 
Subjt:  MALRRFLGFSDGELMRSDAKPCSQLMKQTAGLCTVGGGLAFWILCRLHYGLSSPRITVPRSLRWAACGAASMSATSALLVRLFSPECEPQNIAAYDKRKV

Query:  VR
         R
Subjt:  VR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G57540.1 unknown protein7.3e-3975.76Show/hide
Query:  MALRRFLGFSDGELMRSDAKPCSQLMKQTAGLCTVGGGLAFWILCRLHYGLSSPRITVPRSLRWAACGAASMSATSALLVRLFSPECEPQNIAAYDKRK
        MALR+ LG+S+G+LMRSDAKPCS+LMKQTA + TVGG L FW+LCRLHYG   PRITVPRSLRWA CGA S+S ++A+LVRLFSPECEPQNIAAYD  K
Subjt:  MALRRFLGFSDGELMRSDAKPCSQLMKQTAGLCTVGGGLAFWILCRLHYGLSSPRITVPRSLRWAACGAASMSATSALLVRLFSPECEPQNIAAYDKRK

AT1G57540.2 unknown protein7.3e-3975.76Show/hide
Query:  MALRRFLGFSDGELMRSDAKPCSQLMKQTAGLCTVGGGLAFWILCRLHYGLSSPRITVPRSLRWAACGAASMSATSALLVRLFSPECEPQNIAAYDKRK
        MALR+ LG+S+G+LMRSDAKPCS+LMKQTA + TVGG L FW+LCRLHYG   PRITVPRSLRWA CGA S+S ++A+LVRLFSPECEPQNIAAYD  K
Subjt:  MALRRFLGFSDGELMRSDAKPCSQLMKQTAGLCTVGGGLAFWILCRLHYGLSSPRITVPRSLRWAACGAASMSATSALLVRLFSPECEPQNIAAYDKRK

AT1G57540.3 unknown protein7.3e-3975.76Show/hide
Query:  MALRRFLGFSDGELMRSDAKPCSQLMKQTAGLCTVGGGLAFWILCRLHYGLSSPRITVPRSLRWAACGAASMSATSALLVRLFSPECEPQNIAAYDKRK
        MALR+ LG+S+G+LMRSDAKPCS+LMKQTA + TVGG L FW+LCRLHYG   PRITVPRSLRWA CGA S+S ++A+LVRLFSPECEPQNIAAYD  K
Subjt:  MALRRFLGFSDGELMRSDAKPCSQLMKQTAGLCTVGGGLAFWILCRLHYGLSSPRITVPRSLRWAACGAASMSATSALLVRLFSPECEPQNIAAYDKRK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCACTTCGACGATTCTTAGGCTTTTCAGATGGTGAGCTCATGAGATCAGATGCTAAGCCCTGTTCACAGTTGATGAAACAGACTGCTGGGTTATGTACTGTTGGAGG
AGGACTTGCGTTCTGGATTCTTTGTAGATTACATTATGGTCTGTCAAGTCCAAGAATTACAGTACCTAGGAGTCTTCGTTGGGCAGCTTGTGGAGCAGCATCGATGAGTG
CAACCTCAGCTTTGCTTGTCCGATTGTTTAGTCCAGAATGTGAACCCCAGAATATAGCTGCTTATGACAAAAGGAAAGTTGTAAGGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCACTTCGACGATTCTTAGGCTTTTCAGATGGTGAGCTCATGAGATCAGATGCTAAGCCCTGTTCACAGTTGATGAAACAGACTGCTGGGTTATGTACTGTTGGAGG
AGGACTTGCGTTCTGGATTCTTTGTAGATTACATTATGGTCTGTCAAGTCCAAGAATTACAGTACCTAGGAGTCTTCGTTGGGCAGCTTGTGGAGCAGCATCGATGAGTG
CAACCTCAGCTTTGCTTGTCCGATTGTTTAGTCCAGAATGTGAACCCCAGAATATAGCTGCTTATGACAAAAGGAAAGTTGTAAGGTAA
Protein sequenceShow/hide protein sequence
MALRRFLGFSDGELMRSDAKPCSQLMKQTAGLCTVGGGLAFWILCRLHYGLSSPRITVPRSLRWAACGAASMSATSALLVRLFSPECEPQNIAAYDKRKVVR