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HG10006329 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10006329
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionUnknown protein
Genome locationChr07:17397284..17398012
RNA-Seq ExpressionHG10006329
SyntenyHG10006329
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022137488.1 uncharacterized protein LOC111008920 isoform X1 [Momordica charantia]1.6e-0644.29Show/hide
Query:  NETEGADFEFVEIEKACSQIVCGCMLYLTLKVRPKGMPSDYPTTSLQAKVLYGIGENNITTEFCGLTPGN
        N   GA FEFV++ KA SQ   G + +LT +V+  G P D PTT+LQA+VL GI  ++   + C   P N
Subjt:  NETEGADFEFVEIEKACSQIVCGCMLYLTLKVRPKGMPSDYPTTSLQAKVLYGIGENNITTEFCGLTPGN

XP_022137489.1 uncharacterized protein LOC111008920 isoform X2 [Momordica charantia]1.6e-0646.27Show/hide
Query:  EGADFEFVEIEKACSQIVCGCMLYLTLKVRPKGMPSDYPTTSLQAKVLYGIGENNITTEFCGLTPGN
        EGA FEFV++ KA SQ   G + +LT +V+  G P D PTT+LQA+VL GI  ++   + C   P N
Subjt:  EGADFEFVEIEKACSQIVCGCMLYLTLKVRPKGMPSDYPTTSLQAKVLYGIGENNITTEFCGLTPGN

XP_022149809.1 uncharacterized protein LOC111018153 [Momordica charantia]2.4e-0545.71Show/hide
Query:  NETEGADFEFVEIEKACSQIVCGCMLYLTLKVRPKGMPSDYPTTSLQAKVLYGIGENNITTEFCGLTPGN
        N+    +FE VEIEKA     CG  LY+T KV+P G P++YPTT+ QA+VL       I  E C + P N
Subjt:  NETEGADFEFVEIEKACSQIVCGCMLYLTLKVRPKGMPSDYPTTSLQAKVLYGIGENNITTEFCGLTPGN

TrEMBL top hitse value%identityAlignment
A0A6J1C7D4 uncharacterized protein LOC111008920 isoform X27.9e-0746.27Show/hide
Query:  EGADFEFVEIEKACSQIVCGCMLYLTLKVRPKGMPSDYPTTSLQAKVLYGIGENNITTEFCGLTPGN
        EGA FEFV++ KA SQ   G + +LT +V+  G P D PTT+LQA+VL GI  ++   + C   P N
Subjt:  EGADFEFVEIEKACSQIVCGCMLYLTLKVRPKGMPSDYPTTSLQAKVLYGIGENNITTEFCGLTPGN

A0A6J1CAH1 uncharacterized protein LOC111008920 isoform X17.9e-0744.29Show/hide
Query:  NETEGADFEFVEIEKACSQIVCGCMLYLTLKVRPKGMPSDYPTTSLQAKVLYGIGENNITTEFCGLTPGN
        N   GA FEFV++ KA SQ   G + +LT +V+  G P D PTT+LQA+VL GI  ++   + C   P N
Subjt:  NETEGADFEFVEIEKACSQIVCGCMLYLTLKVRPKGMPSDYPTTSLQAKVLYGIGENNITTEFCGLTPGN

A0A6J1D850 uncharacterized protein LOC1110181531.1e-0545.71Show/hide
Query:  NETEGADFEFVEIEKACSQIVCGCMLYLTLKVRPKGMPSDYPTTSLQAKVLYGIGENNITTEFCGLTPGN
        N+    +FE VEIEKA     CG  LY+T KV+P G P++YPTT+ QA+VL       I  E C + P N
Subjt:  NETEGADFEFVEIEKACSQIVCGCMLYLTLKVRPKGMPSDYPTTSLQAKVLYGIGENNITTEFCGLTPGN

A0A6J1IJT3 uncharacterized protein LOC1114753208.2e-0435.23Show/hide
Query:  EEREWTKEEELLYYRTLNETEGADFEFVEIEKACSQIVCGCMLYLTLKVRPKGMPSDYPTTSLQAKVLYGIG-ENNITTEFCGLTPGN
        +E + +  E + +Y   N   G +FE V+I KA  +  CG M Y+T  V+P G  +++P+ + QAKV Y I  ++ I  E C   P N
Subjt:  EEREWTKEEELLYYRTLNETEGADFEFVEIEKACSQIVCGCMLYLTLKVRPKGMPSDYPTTSLQAKVLYGIG-ENNITTEFCGLTPGN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCCTCGTCGTCTTCCAAACCCTCCCGGCCGCCTATGTCGGAGTATCATCCATCAGAAGAGGACAGTGACGATATCCCTGACGACCCTGACTGGGAGTCTGAATC
TCCAATAGAGTGCGAAGGTGACTCCTCGGAGTCGGAAGGTGAGATCACAGATCGGGAAGAGCGTGAGTGGACCAAAGAAGAAGAGCTCCTCTACTACCGTACATTGAATG
AAACAGAGGGTGCCGACTTTGAGTTTGTGGAGATTGAAAAGGCTTGCAGTCAGATTGTGTGTGGTTGCATGCTTTACCTTACTCTCAAGGTTAGGCCTAAGGGGATGCCT
TCCGATTACCCAACCACTTCCCTTCAGGCCAAAGTGCTCTACGGAATTGGGGAAAACAATATTACTACTGAATTCTGCGGACTTACACCTGGTAATTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCTTCCTCGTCGTCTTCCAAACCCTCCCGGCCGCCTATGTCGGAGTATCATCCATCAGAAGAGGACAGTGACGATATCCCTGACGACCCTGACTGGGAGTCTGAATC
TCCAATAGAGTGCGAAGGTGACTCCTCGGAGTCGGAAGGTGAGATCACAGATCGGGAAGAGCGTGAGTGGACCAAAGAAGAAGAGCTCCTCTACTACCGTACATTGAATG
AAACAGAGGGTGCCGACTTTGAGTTTGTGGAGATTGAAAAGGCTTGCAGTCAGATTGTGTGTGGTTGCATGCTTTACCTTACTCTCAAGGTTAGGCCTAAGGGGATGCCT
TCCGATTACCCAACCACTTCCCTTCAGGCCAAAGTGCTCTACGGAATTGGGGAAAACAATATTACTACTGAATTCTGCGGACTTACACCTGGTAATTAA
Protein sequenceShow/hide protein sequence
MASSSSSKPSRPPMSEYHPSEEDSDDIPDDPDWESESPIECEGDSSESEGEITDREEREWTKEEELLYYRTLNETEGADFEFVEIEKACSQIVCGCMLYLTLKVRPKGMP
SDYPTTSLQAKVLYGIGENNITTEFCGLTPGN