CuGenDBv2

Gene ID	HG10006376
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	CST complex subunit TEN1
Genome location	Chr07:17849063..17850322
RNA-Seq Expression	HG10006376
Synteny	HG10006376
Gene Ontology terms	GO:0006457 - protein folding (biological process) GO:0009408 - response to heat (biological process) GO:0019827 - stem cell population maintenance (biological process) GO:0032211 - negative regulation of telomere maintenance via telomerase (biological process) GO:0048367 - shoot system development (biological process) GO:0051974 - negative regulation of telomerase activity (biological process) GO:1990879 - CST complex (cellular component) GO:0003697 - single-stranded DNA binding (molecular function) GO:0010521 - telomerase inhibitor activity (molecular function) GO:0042162 - telomeric DNA binding (molecular function) GO:0044183 - protein folding chaperone (molecular function)
InterPro domains	IPR029146 - CST complex subunit Ten1, animal and plant type

Homology

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GenBank top hits

e value

%identity

Alignment

XP_004144770.1 CST complex subunit TEN1 isoform X1 [Cucumis sativus]

1.3e-55

94.44

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Query:  MASAAIKSGALVSLKDLMKPSSEFFKDGASLRVTGKLVEYSVETAIAIIVDGNVNLKIDTQHLRELSIRIGSIYQFIGELLVQSDNEATLQARVGRNVDG
        MA +AIKSGALVSLKDLM PSSEFFKDGASLRVTGKLVEYSVETAIAIIVDGNVNLKIDTQHL ELSIRIGSIYQFIGELLVQSDNEA L+ARVGRNVDG
Subjt:  MASAAIKSGALVSLKDLMKPSSEFFKDGASLRVTGKLVEYSVETAIAIIVDGNVNLKIDTQHLRELSIRIGSIYQFIGELLVQSDNEATLQARVGRNVDG

Query:  IDLNLYHQALQLLRQFQADHLNKRTN
        IDLNLYHQ+LQLLRQFQADHLNKRTN
Subjt:  IDLNLYHQALQLLRQFQADHLNKRTN

XP_008453918.1 PREDICTED: CST complex subunit TEN1 [Cucumis melo]

1.1e-57

96.83

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Query:  MASAAIKSGALVSLKDLMKPSSEFFKDGASLRVTGKLVEYSVETAIAIIVDGNVNLKIDTQHLRELSIRIGSIYQFIGELLVQSDNEATLQARVGRNVDG
        MA +AIKSGALVSLKDLMKPSSEFFKDGASLRVTGKLVEYSVETAIAIIVDGNVNLKIDTQHLRELSIRIGSIYQFIGELLVQSDNEA LQARVGRNVDG
Subjt:  MASAAIKSGALVSLKDLMKPSSEFFKDGASLRVTGKLVEYSVETAIAIIVDGNVNLKIDTQHLRELSIRIGSIYQFIGELLVQSDNEATLQARVGRNVDG

Query:  IDLNLYHQALQLLRQFQADHLNKRTN
        IDLNLYHQ+LQLLRQFQADHLNKRTN
Subjt:  IDLNLYHQALQLLRQFQADHLNKRTN

XP_023536947.1 CST complex subunit TEN1-like [Cucurbita pepo subsp. pepo]

7.6e-56

95.24

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Query:  MASAAIKSGALVSLKDLMKPSSEFFKDGASLRVTGKLVEYSVETAIAIIVDGNVNLKIDTQHLRELSIRIGSIYQFIGELLVQSDNEATLQARVGRNVDG
        MASAAIKSGALVSLKDL KPSSEFFKDGASLRVTGKLVEYSVETAIAIIVDGNV+LKIDTQHLREL+ RIGSIYQFIGELLVQSDNEATLQARVGRNVDG
Subjt:  MASAAIKSGALVSLKDLMKPSSEFFKDGASLRVTGKLVEYSVETAIAIIVDGNVNLKIDTQHLRELSIRIGSIYQFIGELLVQSDNEATLQARVGRNVDG

Query:  IDLNLYHQALQLLRQFQADHLNKRTN
        IDLNLYHQ+LQLL+QFQADHLNKRTN
Subjt:  IDLNLYHQALQLLRQFQADHLNKRTN

XP_038889105.1 CST complex subunit TEN1 isoform X1 [Benincasa hispida]

5.6e-59

98.41

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Query:  MASAAIKSGALVSLKDLMKPSSEFFKDGASLRVTGKLVEYSVETAIAIIVDGNVNLKIDTQHLRELSIRIGSIYQFIGELLVQSDNEATLQARVGRNVDG
        MASAAIKSGALVSLKDLMKPSSEFFKDGASLRVTGKLVEYSVETAIAIIVDGNVNLKIDTQHLRELSIRIGSIYQFIGELLVQSDNEATL+ARVGRNVDG
Subjt:  MASAAIKSGALVSLKDLMKPSSEFFKDGASLRVTGKLVEYSVETAIAIIVDGNVNLKIDTQHLRELSIRIGSIYQFIGELLVQSDNEATLQARVGRNVDG

Query:  IDLNLYHQALQLLRQFQADHLNKRTN
        IDLNLYHQ+LQLLRQFQADHLNKRTN
Subjt:  IDLNLYHQALQLLRQFQADHLNKRTN

XP_038889106.1 CST complex subunit TEN1 isoform X2 [Benincasa hispida]

5.6e-59

98.41

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Query:  MASAAIKSGALVSLKDLMKPSSEFFKDGASLRVTGKLVEYSVETAIAIIVDGNVNLKIDTQHLRELSIRIGSIYQFIGELLVQSDNEATLQARVGRNVDG
        MASAAIKSGALVSLKDLMKPSSEFFKDGASLRVTGKLVEYSVETAIAIIVDGNVNLKIDTQHLRELSIRIGSIYQFIGELLVQSDNEATL+ARVGRNVDG
Subjt:  MASAAIKSGALVSLKDLMKPSSEFFKDGASLRVTGKLVEYSVETAIAIIVDGNVNLKIDTQHLRELSIRIGSIYQFIGELLVQSDNEATLQARVGRNVDG

Query:  IDLNLYHQALQLLRQFQADHLNKRTN
        IDLNLYHQ+LQLLRQFQADHLNKRTN
Subjt:  IDLNLYHQALQLLRQFQADHLNKRTN

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LFY0 Uncharacterized protein

6.3e-56

94.44

Show/hide

Query:  MASAAIKSGALVSLKDLMKPSSEFFKDGASLRVTGKLVEYSVETAIAIIVDGNVNLKIDTQHLRELSIRIGSIYQFIGELLVQSDNEATLQARVGRNVDG
        MA +AIKSGALVSLKDLM PSSEFFKDGASLRVTGKLVEYSVETAIAIIVDGNVNLKIDTQHL ELSIRIGSIYQFIGELLVQSDNEA L+ARVGRNVDG
Subjt:  MASAAIKSGALVSLKDLMKPSSEFFKDGASLRVTGKLVEYSVETAIAIIVDGNVNLKIDTQHLRELSIRIGSIYQFIGELLVQSDNEATLQARVGRNVDG

Query:  IDLNLYHQALQLLRQFQADHLNKRTN
        IDLNLYHQ+LQLLRQFQADHLNKRTN
Subjt:  IDLNLYHQALQLLRQFQADHLNKRTN

A0A1S3BY71 CST complex subunit TEN1

5.1e-58

96.83

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Query:  MASAAIKSGALVSLKDLMKPSSEFFKDGASLRVTGKLVEYSVETAIAIIVDGNVNLKIDTQHLRELSIRIGSIYQFIGELLVQSDNEATLQARVGRNVDG
        MA +AIKSGALVSLKDLMKPSSEFFKDGASLRVTGKLVEYSVETAIAIIVDGNVNLKIDTQHLRELSIRIGSIYQFIGELLVQSDNEA LQARVGRNVDG
Subjt:  MASAAIKSGALVSLKDLMKPSSEFFKDGASLRVTGKLVEYSVETAIAIIVDGNVNLKIDTQHLRELSIRIGSIYQFIGELLVQSDNEATLQARVGRNVDG

Query:  IDLNLYHQALQLLRQFQADHLNKRTN
        IDLNLYHQ+LQLLRQFQADHLNKRTN
Subjt:  IDLNLYHQALQLLRQFQADHLNKRTN

A0A6J1DRX0 CST complex subunit TEN1 isoform X1

1.4e-55

93.65

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Query:  MASAAIKSGALVSLKDLMKPSSEFFKDGASLRVTGKLVEYSVETAIAIIVDGNVNLKIDTQHLRELSIRIGSIYQFIGELLVQSDNEATLQARVGRNVDG
        MAS+AIKSGALV LKDL KPSSEFFKDGASLRVTGKLVEYSVETA+A+IVDGNVNLKIDTQHLRELS RIGSIYQFIGELLVQSDNEATLQARVGRNVDG
Subjt:  MASAAIKSGALVSLKDLMKPSSEFFKDGASLRVTGKLVEYSVETAIAIIVDGNVNLKIDTQHLRELSIRIGSIYQFIGELLVQSDNEATLQARVGRNVDG

Query:  IDLNLYHQALQLLRQFQADHLNKRTN
        IDLNLYHQ+LQLLRQFQADH NKRTN
Subjt:  IDLNLYHQALQLLRQFQADHLNKRTN

A0A6J1FHR1 CST complex subunit TEN1

3.1e-55

93.65

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Query:  MASAAIKSGALVSLKDLMKPSSEFFKDGASLRVTGKLVEYSVETAIAIIVDGNVNLKIDTQHLRELSIRIGSIYQFIGELLVQSDNEATLQARVGRNVDG
        MASAAIKSGALVSLKDL KPSSEFFKDGASLRVTGKLVEYSVETAIAIIVDGNV+LKIDT+HLREL+ RIGSIYQFIGELLVQS+NEATLQARVGRNVDG
Subjt:  MASAAIKSGALVSLKDLMKPSSEFFKDGASLRVTGKLVEYSVETAIAIIVDGNVNLKIDTQHLRELSIRIGSIYQFIGELLVQSDNEATLQARVGRNVDG

Query:  IDLNLYHQALQLLRQFQADHLNKRTN
        IDLNLYHQ+LQLL+QFQADHLNKRTN
Subjt:  IDLNLYHQALQLLRQFQADHLNKRTN

A0A6J1HSH0 CST complex subunit TEN1-like

1.1e-55

94.44

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Query:  MASAAIKSGALVSLKDLMKPSSEFFKDGASLRVTGKLVEYSVETAIAIIVDGNVNLKIDTQHLRELSIRIGSIYQFIGELLVQSDNEATLQARVGRNVDG
        MASAAIKSGALVSLKDL KPSSEFFKDGASLRVTGKLVEYSVETAIAIIVDGNV+LKIDTQHLREL+ RIGSIYQFIGELLVQS+NEATLQARVGRNVDG
Subjt:  MASAAIKSGALVSLKDLMKPSSEFFKDGASLRVTGKLVEYSVETAIAIIVDGNVNLKIDTQHLRELSIRIGSIYQFIGELLVQSDNEATLQARVGRNVDG

Query:  IDLNLYHQALQLLRQFQADHLNKRTN
        IDLNLYHQ+LQLL+QFQADHLNKRTN
Subjt:  IDLNLYHQALQLLRQFQADHLNKRTN

SwissProt top hits

e value

%identity

Alignment

Q6NME7 CST complex subunit TEN1

4.4e-30

57.72

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Query:  MASAAIKSGALVSLKDLMKPSSEFFKDGASLRVTGKLVEYSVETAIAIIVDGNVNLKIDTQHLRELSIRIGSIYQFIGEL-LVQSDNEATLQARVGRNVD
        MA + I+ G  ++L++L  PSS F+K+G SLRVT  L  YSVETAI +I DG  +LKI+TQ++R++S R+GSIYQFIGEL + Q +NEA LQAR GRNVD
Subjt:  MASAAIKSGALVSLKDLMKPSSEFFKDGASLRVTGKLVEYSVETAIAIIVDGNVNLKIDTQHLRELSIRIGSIYQFIGEL-LVQSDNEATLQARVGRNVD

Query:  GIDLNLYHQALQLLRQFQADHLN
        GID+NLY + ++LLRQF  +  N
Subjt:  GIDLNLYHQALQLLRQFQADHLN

Arabidopsis top hits

e value

%identity

Alignment

AT1G56260.1 unknown protein

3.1e-31

57.72

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Query:  MASAAIKSGALVSLKDLMKPSSEFFKDGASLRVTGKLVEYSVETAIAIIVDGNVNLKIDTQHLRELSIRIGSIYQFIGEL-LVQSDNEATLQARVGRNVD
        MA + I+ G  ++L++L  PSS F+K+G SLRVT  L  YSVETAI +I DG  +LKI+TQ++R++S R+GSIYQFIGEL + Q +NEA LQAR GRNVD
Subjt:  MASAAIKSGALVSLKDLMKPSSEFFKDGASLRVTGKLVEYSVETAIAIIVDGNVNLKIDTQHLRELSIRIGSIYQFIGEL-LVQSDNEATLQARVGRNVD

Query:  GIDLNLYHQALQLLRQFQADHLN
        GID+NLY + ++LLRQF  +  N
Subjt:  GIDLNLYHQALQLLRQFQADHLN

Sequences

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CDS sequence

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ATGGCATCGGCTGCAATAAAATCAGGGGCTTTGGTTTCACTGAAAGACCTGATGAAGCCATCTTCTGAGTTCTTCAAGGATGGGGCTTCACTTAGAGTTACTGGAAAATT
AGTGGAGTATTCTGTAGAGACAGCCATTGCCATAATTGTTGATGGAAATGTTAACTTGAAGATCGACACACAGCATCTGAGAGAACTTAGCATTCGCATTGGCTCCATAT
ATCAATTTATTGGTGAACTACTTGTTCAGTCAGATAATGAGGCAACTCTGCAGGCACGTGTTGGCAGGAATGTTGATGGCATTGACCTCAACCTTTATCATCAGGCCCTG
CAGCTGTTAAGACAATTTCAAGCTGATCACTTGAACAAGAGGACAAATTAG

mRNA sequence

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Protein sequence

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MASAAIKSGALVSLKDLMKPSSEFFKDGASLRVTGKLVEYSVETAIAIIVDGNVNLKIDTQHLRELSIRIGSIYQFIGELLVQSDNEATLQARVGRNVDGIDLNLYHQAL
QLLRQFQADHLNKRTN

HG10006376 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome