CuGenDBv2

Gene ID	HG10006378
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	TPR_REGION domain-containing protein
Genome location	Chr07:17866934..17870362
RNA-Seq Expression	HG10006378
Synteny	HG10006378
Gene Ontology terms	GO:0016021 - integral component of membrane (cellular component) GO:0005515 - protein binding (molecular function) GO:0016740 - transferase activity (molecular function)
InterPro domains	IPR011990 - Tetratricopeptide-like helical domain superfamily IPR019734 - Tetratricopeptide repeat

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

TYJ96494.1 uncharacterized protein E5676_scaffold546G001400 [Cucumis melo var. makuwa]

1.3e-126

87.64

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Query:  MATISSLKSSISISRSLHISFTTPSFPNSTKTLEIFHSPSSLPTRITLNHVPPLSLSRRLFVPSVSGIWDAITGGNNPRDAVAAIRRGMLLFRQGDVLGS
        MAT S LKSSISIS SLH SFT PSF NS+KT+E FHSP+SLP RITLNHVPPLSLSRRLFVPSVSGIWDA+TGGNNPRDAVAAIRRGMLLFRQGDVLGS
Subjt:  MATISSLKSSISISRSLHISFTTPSFPNSTKTLEIFHSPSSLPTRITLNHVPPLSLSRRLFVPSVSGIWDAITGGNNPRDAVAAIRRGMLLFRQGDVLGS

Query:  LAEFDKAIELDPRQKAC------------RFEEGAEQFRLDVAQNPNDTEESIWCFLCEAQLYGVDEARRRFLQVGRDPRPVMREAYNMFKDGGHPDKLV
        LAEFDKAIELDPRQKA             RFEEGAEQFRLDVAQNPNDTEESIWCFLCEAQLYGVDEARRRFL+VGRDPRPVMREAYNMFK+GGHP+KLV
Subjt:  LAEFDKAIELDPRQKAC------------RFEEGAEQFRLDVAQNPNDTEESIWCFLCEAQLYGVDEARRRFLQVGRDPRPVMREAYNMFKDGGHPDKLV

Query:  AAFSSGRENEYFYACLYAGLYHEAEKKLDAAKQHIIAACQSPYGQRSDDYMAALAKVHCLCRNWSFS
        AAFSSGRENEYFYA LYAGLYHEAEKK+DAAKQHI+AACQS YGQRSDDYMAALAKVHCL RNWSFS
Subjt:  AAFSSGRENEYFYACLYAGLYHEAEKKLDAAKQHIIAACQSPYGQRSDDYMAALAKVHCLCRNWSFS

XP_004144772.1 uncharacterized protein LOC101209381 [Cucumis sativus]

4.7e-129

88.39

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Query:  MATISSLKSSISISRSLHISFTTPSFPNSTKTLEIFHSPSSLPTRITLNHVPPLSLSRRLFVPSVSGIWDAITGGNNPRDAVAAIRRGMLLFRQGDVLGS
        MAT SSLKSSIS+S SLH SFT PSF NSTKT+E+FHSPSSLP RITLNHVPPLSLSRRLFVPSVSGIWDA+TGGNNPRDAVAAIRRGMLLFRQGDVLGS
Subjt:  MATISSLKSSISISRSLHISFTTPSFPNSTKTLEIFHSPSSLPTRITLNHVPPLSLSRRLFVPSVSGIWDAITGGNNPRDAVAAIRRGMLLFRQGDVLGS

Query:  LAEFDKAIELDPRQKAC------------RFEEGAEQFRLDVAQNPNDTEESIWCFLCEAQLYGVDEARRRFLQVGRDPRPVMREAYNMFKDGGHPDKLV
        LAEFDKAIELDPRQKA             RFEEGAEQFRLDVAQNPNDTEESIWCFLCEAQLYGVDEARRRFL+VGRDPRPVMREAYNMFKDGGHP+KLV
Subjt:  LAEFDKAIELDPRQKAC------------RFEEGAEQFRLDVAQNPNDTEESIWCFLCEAQLYGVDEARRRFLQVGRDPRPVMREAYNMFKDGGHPDKLV

Query:  AAFSSGRENEYFYACLYAGLYHEAEKKLDAAKQHIIAACQSPYGQRSDDYMAALAKVHCLCRNWSFS
        AAFSSGRENEYFYA LYAGLYHEAEKK+DAAKQ I+AACQS Y QRSDDYMAALAKVHCLCRNWSFS
Subjt:  AAFSSGRENEYFYACLYAGLYHEAEKKLDAAKQHIIAACQSPYGQRSDDYMAALAKVHCLCRNWSFS

XP_022999589.1 uncharacterized protein LOC111493913 isoform X3 [Cucurbita maxima]

7.5e-127

87.55

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Query:  MATISSLKSSISISRSLHISFTTPSFPNSTKTLEIFHSPSSLPTRITLNHVPPLSLSRRLFVPSVSGIWDAITGGNNPRDAVAAIRRGMLLFRQGDVLGS
        MA ISSLK SIS+SRS HISFT PS PNSTK LE  HSPSSLP RI LNHVPPLSLSRRLFVPSVSGIWDA+TGGNNPRDAVAAIRRGMLLFR+GDV GS
Subjt:  MATISSLKSSISISRSLHISFTTPSFPNSTKTLEIFHSPSSLPTRITLNHVPPLSLSRRLFVPSVSGIWDAITGGNNPRDAVAAIRRGMLLFRQGDVLGS

Query:  LAEFDKAIELDPRQKAC------------RFEEGAEQFRLDVAQNPNDTEESIWCFLCEAQLYGVDEARRRFLQVGRDPRPVMREAYNMFKDGGHPDKLV
        LAEFDKAIELDPRQKA             RFEEGAEQFRLDVAQNP+DTEESIWCF+CEAQLYGVDEARRRFL+VGRDPRPVMREAYNMFKDGGHP+KLV
Subjt:  LAEFDKAIELDPRQKAC------------RFEEGAEQFRLDVAQNPNDTEESIWCFLCEAQLYGVDEARRRFLQVGRDPRPVMREAYNMFKDGGHPDKLV

Query:  AAFSSGRENEYFYACLYAGLYHEAEKKLDAAKQHIIAACQSPYGQRSDDYMAALAKVHCLCRNWS
        AAFSSGRENEYFYA LYAGLYHEAEKKLDAAKQHI+AACQSPYGQRSDDYMAALAKVHCLCRNWS
Subjt:  AAFSSGRENEYFYACLYAGLYHEAEKKLDAAKQHIIAACQSPYGQRSDDYMAALAKVHCLCRNWS

XP_023545315.1 uncharacterized protein LOC111804759 isoform X1 [Cucurbita pepo subsp. pepo]

4.1e-125

85.66

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Query:  MATISSLKSSISISRSLHISFTTPSFPNSTKTLEIFHSPSSLPTRITLNHVPPLSLSRRLFVPSVSGIWDAITGGNNPRDAVAAIRRGMLLFRQGDVLGS
        MA IS+LK SIS+SRS HISFT PS PNSTK LE  HSP+S P +I LNHVPPLSLSRRLFVPSVSGIWDA+TGGNNPRDAV AIRRGMLLFR+GDV GS
Subjt:  MATISSLKSSISISRSLHISFTTPSFPNSTKTLEIFHSPSSLPTRITLNHVPPLSLSRRLFVPSVSGIWDAITGGNNPRDAVAAIRRGMLLFRQGDVLGS

Query:  LAEFDKAIELDPRQKAC------------RFEEGAEQFRLDVAQNPNDTEESIWCFLCEAQLYGVDEARRRFLQVGRDPRPVMREAYNMFKDGGHPDKLV
        LAEFDKAIELDPRQKA             RF+EGAEQFRLDVAQNPNDTEESIWCF+CEAQLYGVDEARRRFL+VGRDPRPVMREAYNMFKDGGHP+KLV
Subjt:  LAEFDKAIELDPRQKAC------------RFEEGAEQFRLDVAQNPNDTEESIWCFLCEAQLYGVDEARRRFLQVGRDPRPVMREAYNMFKDGGHPDKLV

Query:  AAFSSGRENEYFYACLYAGLYHEAEKKLDAAKQHIIAACQSPYGQRSDDYMAALAKVHCLCRNWS
        AAFSSGRENEYFYA LYAGLYHEAEKKLDAAKQHI+AACQSPYGQRSDDYMAALAKVHCLCRNWS
Subjt:  AAFSSGRENEYFYACLYAGLYHEAEKKLDAAKQHIIAACQSPYGQRSDDYMAALAKVHCLCRNWS

XP_038889663.1 uncharacterized protein LOC120079523 [Benincasa hispida]

2.5e-130

89.14

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Query:  MATISSLKSSISISRSLHISFTTPSFPNSTKTLEIFHSPSSLPTRITLNHVPPLSLSRRLFVPSVSGIWDAITGGNNPRDAVAAIRRGMLLFRQGDVLGS
        MA ISSLKSSISIS SLHI F  PSFPNSTKTLEI HSPSSLP RITLNHVPPLSLSRRLFVPSVSGIWDA+TGGNNPRDAVAAIRRGMLLFRQGDVLGS
Subjt:  MATISSLKSSISISRSLHISFTTPSFPNSTKTLEIFHSPSSLPTRITLNHVPPLSLSRRLFVPSVSGIWDAITGGNNPRDAVAAIRRGMLLFRQGDVLGS

Query:  LAEFDKAIELDPRQKAC------------RFEEGAEQFRLDVAQNPNDTEESIWCFLCEAQLYGVDEARRRFLQVGRDPRPVMREAYNMFKDGGHPDKLV
        LAEFDKAIELDPRQKA             RFEEGAEQFRLDVAQNPNDTEESIWCFLCEAQLYGVDEARRRFL+VGRD RPVMREAYNMFKDGGHP+KL+
Subjt:  LAEFDKAIELDPRQKAC------------RFEEGAEQFRLDVAQNPNDTEESIWCFLCEAQLYGVDEARRRFLQVGRDPRPVMREAYNMFKDGGHPDKLV

Query:  AAFSSGRENEYFYACLYAGLYHEAEKKLDAAKQHIIAACQSPYGQRSDDYMAALAKVHCLCRNWSFS
        AAFSSGRENEYFYA LYAGLYHEAEKKLDAAKQHI+AACQSPYGQRSDDYMAAL +VHCLCRNWSFS
Subjt:  AAFSSGRENEYFYACLYAGLYHEAEKKLDAAKQHIIAACQSPYGQRSDDYMAALAKVHCLCRNWSFS

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LGH0 TPR_REGION domain-containing protein

2.3e-129

88.39

Show/hide

Query:  MATISSLKSSISISRSLHISFTTPSFPNSTKTLEIFHSPSSLPTRITLNHVPPLSLSRRLFVPSVSGIWDAITGGNNPRDAVAAIRRGMLLFRQGDVLGS
        MAT SSLKSSIS+S SLH SFT PSF NSTKT+E+FHSPSSLP RITLNHVPPLSLSRRLFVPSVSGIWDA+TGGNNPRDAVAAIRRGMLLFRQGDVLGS
Subjt:  MATISSLKSSISISRSLHISFTTPSFPNSTKTLEIFHSPSSLPTRITLNHVPPLSLSRRLFVPSVSGIWDAITGGNNPRDAVAAIRRGMLLFRQGDVLGS

Query:  LAEFDKAIELDPRQKAC------------RFEEGAEQFRLDVAQNPNDTEESIWCFLCEAQLYGVDEARRRFLQVGRDPRPVMREAYNMFKDGGHPDKLV
        LAEFDKAIELDPRQKA             RFEEGAEQFRLDVAQNPNDTEESIWCFLCEAQLYGVDEARRRFL+VGRDPRPVMREAYNMFKDGGHP+KLV
Subjt:  LAEFDKAIELDPRQKAC------------RFEEGAEQFRLDVAQNPNDTEESIWCFLCEAQLYGVDEARRRFLQVGRDPRPVMREAYNMFKDGGHPDKLV

Query:  AAFSSGRENEYFYACLYAGLYHEAEKKLDAAKQHIIAACQSPYGQRSDDYMAALAKVHCLCRNWSFS
        AAFSSGRENEYFYA LYAGLYHEAEKK+DAAKQ I+AACQS Y QRSDDYMAALAKVHCLCRNWSFS
Subjt:  AAFSSGRENEYFYACLYAGLYHEAEKKLDAAKQHIIAACQSPYGQRSDDYMAALAKVHCLCRNWSFS

A0A1S3BXM7 uncharacterized protein LOC103494530

3.4e-125

86.89

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Query:  MATISSLKSSISISRSLHISFTTPSFPNSTKTLEIFHSPSSLPTRITLNHVPPLSLSRRLFVPSVSGIWDAITGGNNPRDAVAAIRRGMLLFRQGDVLGS
        MAT S LKSSISIS SLH SFT PSF NS+KT+E FHSP+SLP RITLNHVPPLSLSRRLFVPSVSGIWDA+TGGNNPRDAVAAIRRGMLLFRQGDVL S
Subjt:  MATISSLKSSISISRSLHISFTTPSFPNSTKTLEIFHSPSSLPTRITLNHVPPLSLSRRLFVPSVSGIWDAITGGNNPRDAVAAIRRGMLLFRQGDVLGS

Query:  LAEFDKAIELDPRQKAC------------RFEEGAEQFRLDVAQNPNDTEESIWCFLCEAQLYGVDEARRRFLQVGRDPRPVMREAYNMFKDGGHPDKLV
        LAEFDKAIELDPRQKA             RFEEGAEQFRLDVAQNPNDTEESIWCFLCEAQLYGVDEARRRFL+VGRDPRPVMREAYNMFK+GGHP+KLV
Subjt:  LAEFDKAIELDPRQKAC------------RFEEGAEQFRLDVAQNPNDTEESIWCFLCEAQLYGVDEARRRFLQVGRDPRPVMREAYNMFKDGGHPDKLV

Query:  AAFSSGRENEYFYACLYAGLYHEAEKKLDAAKQHIIAACQSPYGQRSDDYMAALAKVHCLCRNWSFS
        AAFSSGR NEYFYA LYAGLYHEAEKK+DAAKQHI+AACQS YGQRSDDYMAALAKVHCL RNWSFS
Subjt:  AAFSSGRENEYFYACLYAGLYHEAEKKLDAAKQHIIAACQSPYGQRSDDYMAALAKVHCLCRNWSFS

A0A5A7TX07 TPR_REGION domain-containing protein

3.4e-125

86.89

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Query:  MATISSLKSSISISRSLHISFTTPSFPNSTKTLEIFHSPSSLPTRITLNHVPPLSLSRRLFVPSVSGIWDAITGGNNPRDAVAAIRRGMLLFRQGDVLGS
        MAT S LKSSISIS SLH SFT PSF NS+KT+E FHSP+SLP RITLNHVPPLSLSRRLFVPSVSGIWDA+TGGNNPRDAVAAIRRGMLLFRQGDVL S
Subjt:  MATISSLKSSISISRSLHISFTTPSFPNSTKTLEIFHSPSSLPTRITLNHVPPLSLSRRLFVPSVSGIWDAITGGNNPRDAVAAIRRGMLLFRQGDVLGS

Query:  LAEFDKAIELDPRQKAC------------RFEEGAEQFRLDVAQNPNDTEESIWCFLCEAQLYGVDEARRRFLQVGRDPRPVMREAYNMFKDGGHPDKLV
        LAEFDKAIELDPRQKA             RFEEGAEQFRLDVAQNPNDTEESIWCFLCEAQLYGVDEARRRFL+VGRDPRPVMREAYNMFK+GGHP+KLV
Subjt:  LAEFDKAIELDPRQKAC------------RFEEGAEQFRLDVAQNPNDTEESIWCFLCEAQLYGVDEARRRFLQVGRDPRPVMREAYNMFKDGGHPDKLV

Query:  AAFSSGRENEYFYACLYAGLYHEAEKKLDAAKQHIIAACQSPYGQRSDDYMAALAKVHCLCRNWSFS
        AAFSSGR NEYFYA LYAGLYHEAEKK+DAAKQHI+AACQS YGQRSDDYMAALAKVHCL RNWSFS
Subjt:  AAFSSGRENEYFYACLYAGLYHEAEKKLDAAKQHIIAACQSPYGQRSDDYMAALAKVHCLCRNWSFS

A0A5D3BC02 TPR_REGION domain-containing protein

6.2e-127

87.64

Show/hide

Query:  MATISSLKSSISISRSLHISFTTPSFPNSTKTLEIFHSPSSLPTRITLNHVPPLSLSRRLFVPSVSGIWDAITGGNNPRDAVAAIRRGMLLFRQGDVLGS
        MAT S LKSSISIS SLH SFT PSF NS+KT+E FHSP+SLP RITLNHVPPLSLSRRLFVPSVSGIWDA+TGGNNPRDAVAAIRRGMLLFRQGDVLGS
Subjt:  MATISSLKSSISISRSLHISFTTPSFPNSTKTLEIFHSPSSLPTRITLNHVPPLSLSRRLFVPSVSGIWDAITGGNNPRDAVAAIRRGMLLFRQGDVLGS

Query:  LAEFDKAIELDPRQKAC------------RFEEGAEQFRLDVAQNPNDTEESIWCFLCEAQLYGVDEARRRFLQVGRDPRPVMREAYNMFKDGGHPDKLV
        LAEFDKAIELDPRQKA             RFEEGAEQFRLDVAQNPNDTEESIWCFLCEAQLYGVDEARRRFL+VGRDPRPVMREAYNMFK+GGHP+KLV
Subjt:  LAEFDKAIELDPRQKAC------------RFEEGAEQFRLDVAQNPNDTEESIWCFLCEAQLYGVDEARRRFLQVGRDPRPVMREAYNMFKDGGHPDKLV

Query:  AAFSSGRENEYFYACLYAGLYHEAEKKLDAAKQHIIAACQSPYGQRSDDYMAALAKVHCLCRNWSFS
        AAFSSGRENEYFYA LYAGLYHEAEKK+DAAKQHI+AACQS YGQRSDDYMAALAKVHCL RNWSFS
Subjt:  AAFSSGRENEYFYACLYAGLYHEAEKKLDAAKQHIIAACQSPYGQRSDDYMAALAKVHCLCRNWSFS

A0A6J1KHI1 uncharacterized protein LOC111493913 isoform X3

3.6e-127

87.55

Show/hide

Query:  MATISSLKSSISISRSLHISFTTPSFPNSTKTLEIFHSPSSLPTRITLNHVPPLSLSRRLFVPSVSGIWDAITGGNNPRDAVAAIRRGMLLFRQGDVLGS
        MA ISSLK SIS+SRS HISFT PS PNSTK LE  HSPSSLP RI LNHVPPLSLSRRLFVPSVSGIWDA+TGGNNPRDAVAAIRRGMLLFR+GDV GS
Subjt:  MATISSLKSSISISRSLHISFTTPSFPNSTKTLEIFHSPSSLPTRITLNHVPPLSLSRRLFVPSVSGIWDAITGGNNPRDAVAAIRRGMLLFRQGDVLGS

Query:  LAEFDKAIELDPRQKAC------------RFEEGAEQFRLDVAQNPNDTEESIWCFLCEAQLYGVDEARRRFLQVGRDPRPVMREAYNMFKDGGHPDKLV
        LAEFDKAIELDPRQKA             RFEEGAEQFRLDVAQNP+DTEESIWCF+CEAQLYGVDEARRRFL+VGRDPRPVMREAYNMFKDGGHP+KLV
Subjt:  LAEFDKAIELDPRQKAC------------RFEEGAEQFRLDVAQNPNDTEESIWCFLCEAQLYGVDEARRRFLQVGRDPRPVMREAYNMFKDGGHPDKLV

Query:  AAFSSGRENEYFYACLYAGLYHEAEKKLDAAKQHIIAACQSPYGQRSDDYMAALAKVHCLCRNWS
        AAFSSGRENEYFYA LYAGLYHEAEKKLDAAKQHI+AACQSPYGQRSDDYMAALAKVHCLCRNWS
Subjt:  AAFSSGRENEYFYACLYAGLYHEAEKKLDAAKQHIIAACQSPYGQRSDDYMAALAKVHCLCRNWS

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT3G05625.1 Tetratricopeptide repeat (TPR)-like superfamily protein

5.1e-89

73.61

Show/hide

Query:  PPLSLSRRLFVPSVSGIWDAITGG--NNPRDAVAAIRRGMLLFRQGDVLGSLAEFDKAIELDPRQKAC------------RFEEGAEQFRLDVAQNPNDT
        PP +LSRRLF+PSVS IWDAITGG  +NPR+A+AA+RRGM LFRQGDV GS+AEFD+AI LDPRQKA             RFEEGAEQFR+DVAQNPNDT
Subjt:  PPLSLSRRLFVPSVSGIWDAITGG--NNPRDAVAAIRRGMLLFRQGDVLGSLAEFDKAIELDPRQKAC------------RFEEGAEQFRLDVAQNPNDT

Query:  EESIWCFLCEAQLYGVDEARRRFLQVGRDPRPVMREAYNMFKDGGHPDKLVAAFSSGRENEYFYACLYAGLYHEAEKKLDAAKQHIIAACQSPYGQRSDD
        EESIWCF+CEA+L+GVD AR +FL+VGRD RPVMREAYN+FK+GG P+KLV  FSSG+ +EYFYA LYAGLY+EAE K + AK H+ AAC SPYGQRSDD
Subjt:  EESIWCFLCEAQLYGVDEARRRFLQVGRDPRPVMREAYNMFKDGGHPDKLVAAFSSGRENEYFYACLYAGLYHEAEKKLDAAKQHIIAACQSPYGQRSDD

Query:  YMAALAKVHCLCRNWS
        YMA+LAKVHCLCRNWS
Subjt:  YMAALAKVHCLCRNWS

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGCTACAATTTCCAGCCTCAAATCCTCCATTTCCATCTCCCGTTCGCTTCACATATCTTTCACCACGCCTTCTTTCCCCAATTCAACCAAAACCCTCGAAATTTTCCA
CTCTCCGAGCTCGCTTCCGACGAGAATCACGCTCAATCACGTTCCGCCATTGTCATTATCTAGAAGATTGTTCGTTCCTTCAGTCTCTGGAATTTGGGACGCCATAACTG
GGGGAAACAACCCTCGCGACGCTGTTGCTGCCATTCGACGTGGAATGCTTCTCTTTAGGCAGGGCGATGTTTTGGGGTCTTTAGCAGAATTCGATAAGGCAATTGAATTG
GATCCTCGTCAAAAGGCATGTAGATTTGAAGAGGGAGCGGAGCAGTTCCGACTAGATGTTGCACAAAATCCAAACGACACAGAAGAGTCTATTTGGTGCTTTCTTTGTGA
AGCTCAGTTGTATGGTGTTGATGAAGCAAGAAGGCGATTTCTTCAGGTAGGTAGAGATCCACGGCCGGTCATGAGGGAAGCCTACAACATGTTTAAAGATGGTGGCCATC
CGGATAAACTTGTTGCTGCCTTCTCAAGTGGTCGTGAGAATGAGTATTTTTATGCCTGTCTATATGCTGGGCTATATCATGAAGCGGAGAAAAAACTGGATGCAGCTAAA
CAACATATAATTGCAGCTTGCCAGTCTCCTTATGGACAGAGGTCTGATGATTACATGGCAGCTCTTGCCAAAGTTCATTGCCTCTGTCGAAACTGGAGTTTCAGTTAG

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MATISSLKSSISISRSLHISFTTPSFPNSTKTLEIFHSPSSLPTRITLNHVPPLSLSRRLFVPSVSGIWDAITGGNNPRDAVAAIRRGMLLFRQGDVLGSLAEFDKAIEL
DPRQKACRFEEGAEQFRLDVAQNPNDTEESIWCFLCEAQLYGVDEARRRFLQVGRDPRPVMREAYNMFKDGGHPDKLVAAFSSGRENEYFYACLYAGLYHEAEKKLDAAK
QHIIAACQSPYGQRSDDYMAALAKVHCLCRNWSFS

HG10006378 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome