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HG10006408 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10006408
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionLipoxygenase
Genome locationChr07:18219959..18220213
RNA-Seq ExpressionHG10006408
SyntenyHG10006408
Gene Ontology termsGO:0006633 - fatty acid biosynthetic process (biological process)
GO:0031408 - oxylipin biosynthetic process (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0016702 - oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6599220.1 putative linoleate 9S-lipoxygenase 5, partial [Cucurbita argyrosperma subsp. sororia]5.0e-2777.38Show/hide
Query:  MIGKILGDALKATGDALRTTGDIAGSVINARGNFIDRASDVGRLRKTKIKRKVILMSSNVLDFTEFHSIVLDGFSELLGSGIVL
        M GKI+GDALK TGDALRTTGD+AGSV+NA GN IDRA+D+GR+   KIK KVILM SNVLDF EFHS VLDGF+E+LGSGIVL
Subjt:  MIGKILGDALKATGDALRTTGDIAGSVINARGNFIDRASDVGRLRKTKIKRKVILMSSNVLDFTEFHSIVLDGFSELLGSGIVL

XP_022946174.1 probable linoleate 9S-lipoxygenase 5 [Cucurbita moschata]2.2e-2778.57Show/hide
Query:  MIGKILGDALKATGDALRTTGDIAGSVINARGNFIDRASDVGRLRKTKIKRKVILMSSNVLDFTEFHSIVLDGFSELLGSGIVL
        M GKI+GDALK TGDALRTTGD+AGSV+NA GN IDRA+D+GR+   KIK KVILM SNVLDF EFHS VLDGF+ELLGSGIVL
Subjt:  MIGKILGDALKATGDALRTTGDIAGSVINARGNFIDRASDVGRLRKTKIKRKVILMSSNVLDFTEFHSIVLDGFSELLGSGIVL

XP_022999017.1 probable linoleate 9S-lipoxygenase 5 [Cucurbita maxima]1.9e-2677.38Show/hide
Query:  MIGKILGDALKATGDALRTTGDIAGSVINARGNFIDRASDVGRLRKTKIKRKVILMSSNVLDFTEFHSIVLDGFSELLGSGIVL
        M GKI+GDALK TGDALRTTGD+AGSV+NA GN IDRA+D+G +   KIK KVILM SNVLDF EFHS VLDGF+ELLGSGIVL
Subjt:  MIGKILGDALKATGDALRTTGDIAGSVINARGNFIDRASDVGRLRKTKIKRKVILMSSNVLDFTEFHSIVLDGFSELLGSGIVL

XP_023545238.1 probable linoleate 9S-lipoxygenase 5 [Cucurbita pepo subsp. pepo]2.2e-2778.57Show/hide
Query:  MIGKILGDALKATGDALRTTGDIAGSVINARGNFIDRASDVGRLRKTKIKRKVILMSSNVLDFTEFHSIVLDGFSELLGSGIVL
        M GKI+GDALK TGDALRTTGD+AGSV+NA GN IDRA+D+GR+   KIK KVILM SNVLDF EFHS VLDGF+ELLGSGIVL
Subjt:  MIGKILGDALKATGDALRTTGDIAGSVINARGNFIDRASDVGRLRKTKIKRKVILMSSNVLDFTEFHSIVLDGFSELLGSGIVL

XP_038890817.1 probable linoleate 9S-lipoxygenase 5 [Benincasa hispida]5.3e-2982.14Show/hide
Query:  MIGKILGDALKATGDALRTTGDIAGSVINARGNFIDRASDVGRLRKTKIKRKVILMSSNVLDFTEFHSIVLDGFSELLGSGIVL
        M GKI+GDALK TGDALRTTGD+AGSVINA GNFIDRASD+GRL K KIK K+I+M +NVLDFTEFHS VLDGF+ELLGSGIVL
Subjt:  MIGKILGDALKATGDALRTTGDIAGSVINARGNFIDRASDVGRLRKTKIKRKVILMSSNVLDFTEFHSIVLDGFSELLGSGIVL

TrEMBL top hitse value%identityAlignment
A0A0A0LGD8 Uncharacterized protein5.9e-2677.38Show/hide
Query:  MIGKILGDALKATGDALRTTGDIAGSVINARGNFIDRASDVGRLRKTKIKRKVILMSSNVLDFTEFHSIVLDGFSELLGSGIVL
        MIGKILGDALK  GDA RTT DIAGSVINA GNF+DRASD+ RL K KIK KV+LM SNVLDFTEFHS +LD  +ELLGSGIV+
Subjt:  MIGKILGDALKATGDALRTTGDIAGSVINARGNFIDRASDVGRLRKTKIKRKVILMSSNVLDFTEFHSIVLDGFSELLGSGIVL

A0A1S4E045 probable linoleate 9S-lipoxygenase 5 isoform X21.3e-2575.29Show/hide
Query:  MIGK-ILGDALKATGDALRTTGDIAGSVINARGNFIDRASDVGRLRKTKIKRKVILMSSNVLDFTEFHSIVLDGFSELLGSGIVL
        MIGK ILGDALK TG+ LRTTGD+AGS++NA GNFIDRASD+G+L K KIK KVIL+ SNVL+ TEFHS +LDGF+ELLGSGIV+
Subjt:  MIGK-ILGDALKATGDALRTTGDIAGSVINARGNFIDRASDVGRLRKTKIKRKVILMSSNVLDFTEFHSIVLDGFSELLGSGIVL

A0A5D3CPU3 Lipoxygenase1.3e-2575.29Show/hide
Query:  MIGK-ILGDALKATGDALRTTGDIAGSVINARGNFIDRASDVGRLRKTKIKRKVILMSSNVLDFTEFHSIVLDGFSELLGSGIVL
        MIGK ILGDALK TG+ LRTTGD+AGS++NA GNFIDRASD+G+L K KIK KVIL+ SNVL+ TEFHS +LDGF+ELLGSGIV+
Subjt:  MIGK-ILGDALKATGDALRTTGDIAGSVINARGNFIDRASDVGRLRKTKIKRKVILMSSNVLDFTEFHSIVLDGFSELLGSGIVL

A0A6J1G320 Lipoxygenase1.1e-2778.57Show/hide
Query:  MIGKILGDALKATGDALRTTGDIAGSVINARGNFIDRASDVGRLRKTKIKRKVILMSSNVLDFTEFHSIVLDGFSELLGSGIVL
        M GKI+GDALK TGDALRTTGD+AGSV+NA GN IDRA+D+GR+   KIK KVILM SNVLDF EFHS VLDGF+ELLGSGIVL
Subjt:  MIGKILGDALKATGDALRTTGDIAGSVINARGNFIDRASDVGRLRKTKIKRKVILMSSNVLDFTEFHSIVLDGFSELLGSGIVL

A0A6J1K9N0 Lipoxygenase9.1e-2777.38Show/hide
Query:  MIGKILGDALKATGDALRTTGDIAGSVINARGNFIDRASDVGRLRKTKIKRKVILMSSNVLDFTEFHSIVLDGFSELLGSGIVL
        M GKI+GDALK TGDALRTTGD+AGSV+NA GN IDRA+D+G +   KIK KVILM SNVLDF EFHS VLDGF+ELLGSGIVL
Subjt:  MIGKILGDALKATGDALRTTGDIAGSVINARGNFIDRASDVGRLRKTKIKRKVILMSSNVLDFTEFHSIVLDGFSELLGSGIVL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATTGGAAAGATTCTAGGAGATGCCCTTAAAGCCACCGGCGATGCCCTTAGAACGACCGGGGACATTGCCGGGTCCGTCATAAATGCTAGAGGGAACTTTATCGATCG
TGCTAGCGATGTCGGTCGGCTCAGGAAGACGAAGATCAAAAGGAAAGTGATTCTGATGAGTAGCAATGTCTTAGATTTCACTGAGTTTCATTCCATTGTTCTTGATGGTT
TCAGTGAGCTATTGGGCAGTGGAATTGTATTGTAA
mRNA sequenceShow/hide mRNA sequence
ATGATTGGAAAGATTCTAGGAGATGCCCTTAAAGCCACCGGCGATGCCCTTAGAACGACCGGGGACATTGCCGGGTCCGTCATAAATGCTAGAGGGAACTTTATCGATCG
TGCTAGCGATGTCGGTCGGCTCAGGAAGACGAAGATCAAAAGGAAAGTGATTCTGATGAGTAGCAATGTCTTAGATTTCACTGAGTTTCATTCCATTGTTCTTGATGGTT
TCAGTGAGCTATTGGGCAGTGGAATTGTATTGTAA
Protein sequenceShow/hide protein sequence
MIGKILGDALKATGDALRTTGDIAGSVINARGNFIDRASDVGRLRKTKIKRKVILMSSNVLDFTEFHSIVLDGFSELLGSGIVL