; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10006426 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10006426
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionF-box domain LysM domain containing protein
Genome locationChr07:18457532..18459830
RNA-Seq ExpressionHG10006426
SyntenyHG10006426
Gene Ontology termsGO:0006633 - fatty acid biosynthetic process (biological process)
GO:0031408 - oxylipin biosynthetic process (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0005515 - protein binding (molecular function)
GO:0016702 - oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR001810 - F-box domain
IPR018392 - LysM domain
IPR036047 - F-box-like domain superfamily
IPR036779 - LysM domain superfamily
IPR045030 - LysM and putative peptidoglycan-binding domain-containing protein 1-4


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6586259.1 F-box protein, partial [Cucurbita argyrosperma subsp. sororia]1.9e-13390Show/hide
Query:  MGCCCEQDDDVEILRHLNPSPAVQSLPPQPPP-ADSSTAVLSPMNSHFFALSCRDILRLIFENLSISDLARSSCVCRLWHSVASDQEIVSGAFKAPWKVK
        MGCCC++DDDVEILRHL+PSP VQS P Q P   DSSTAVLSPMNSHFFALSCRDILRLIFE LSI DLARSSCV RLW+SVASDQEIVSGAFKAPWKVK
Subjt:  MGCCCEQDDDVEILRHLNPSPAVQSLPPQPPP-ADSSTAVLSPMNSHFFALSCRDILRLIFENLSISDLARSSCVCRLWHSVASDQEIVSGAFKAPWKVK

Query:  DVVGKPSSWSFWRDNCLGKFAISHRILRGDSLASLAVKYSVQVTDIKRLNNMMSDHGIYSRERLLIPIGNPNILINSICYIEMDAIAKREVAVLYLDGIP
        DV+GKPSS SFWRDNCLGKFAISHRILRGDSLASLAVKYSVQV DIKRLNNMMSDHGIYSRERLLIPIGNPNILINSICYIEMDAIAKREVA LYLDGIP
Subjt:  DVVGKPSSWSFWRDNCLGKFAISHRILRGDSLASLAVKYSVQVTDIKRLNNMMSDHGIYSRERLLIPIGNPNILINSICYIEMDAIAKREVAVLYLDGIP

Query:  MTHHLYGKVTCEQGMSSVQVNKRVLHSLSRSMMVDDETAQYYLSISNGDPRAALTEFAEDIRWERHMSIA
         THHLYG+ T +QGMSSVQV KRVLHSLSRSMMVDDETAQYYLSIS+GDPRAALTEFAEDIRWERHM +A
Subjt:  MTHHLYGKVTCEQGMSSVQVNKRVLHSLSRSMMVDDETAQYYLSISNGDPRAALTEFAEDIRWERHMSIA

XP_004139174.1 F-box protein At1g55000 [Cucumis sativus]2.2e-14595.54Show/hide
Query:  MGCCCEQDDDVEILRHLNPSPAVQSLPPQPPPADSSTAVLSPMNSHFFALSCRDILRLIFENLSISDLARSSCVCRLWHSVASDQEIVSGAFKAPWKVKD
        MGCCC+QDDDVEILRHLNPSPA+ S PPQPPPAD S A+LSPMNSHFFALSCRDILRLIFENLSI DLARSSCVCRLWHSVASDQEIVSGAFKAPWKVKD
Subjt:  MGCCCEQDDDVEILRHLNPSPAVQSLPPQPPPADSSTAVLSPMNSHFFALSCRDILRLIFENLSISDLARSSCVCRLWHSVASDQEIVSGAFKAPWKVKD

Query:  VVGKPSSWSFWRDNCLGKFAISHRILRGDSLASLAVKYSVQVTDIKRLNNMMSDHGIYSRERLLIPIGNPNILINSICYIEMDAIAKREVAVLYLDGIPM
        VVGKPSSWSFWRDNCLGKFAISHRILRGDSLASLAVKYSVQVTDIKRLNNMMSDHGIYSRERLLIPIGNPN+LINSICYIEMDAIAKREVAVLYLDGIPM
Subjt:  VVGKPSSWSFWRDNCLGKFAISHRILRGDSLASLAVKYSVQVTDIKRLNNMMSDHGIYSRERLLIPIGNPNILINSICYIEMDAIAKREVAVLYLDGIPM

Query:  THHLYGKVTCEQGMSSVQVNKRVLHSLSRSMMVDDETAQYYLSISNGDPRAALTEFAEDIRWERHMSIA
        T HLYGKVT EQGMSSVQVNKRVLHSLSRSMMVDDETAQYYLSISNG+PRAALTEFAEDIRWERHMSIA
Subjt:  THHLYGKVTCEQGMSSVQVNKRVLHSLSRSMMVDDETAQYYLSISNGDPRAALTEFAEDIRWERHMSIA

XP_022150720.1 F-box protein At1g55000 [Momordica charantia]1.7e-13791.82Show/hide
Query:  MGCCCEQDDDVEILRHLNPSPAVQSLPPQPPPADSSTAVLSPMNSHFFALSCRDILRLIFENLSISDLARSSCVCRLWHSVASDQEIVSGAFKAPWKVKD
        MGCCC+QDDDVEILRHLNP+ AV S    PP ADSSTAVLSPMNSHFFALSCRDILRLIFE LSI DLARSSCVCRLW SVASD EIV+GAFKAPWK+KD
Subjt:  MGCCCEQDDDVEILRHLNPSPAVQSLPPQPPPADSSTAVLSPMNSHFFALSCRDILRLIFENLSISDLARSSCVCRLWHSVASDQEIVSGAFKAPWKVKD

Query:  VVGKPSSWSFWRDNCLGKFAISHRILRGDSLASLAVKYSVQVTDIKRLNNMMSDHGIYSRERLLIPIGNPNILINSICYIEMDAIAKREVAVLYLDGIPM
        V+GKPSS SFWRDNCLGKFAISHRILRGDSLASLAVKYSVQV DIKRLNNMMSDHGIYSRERLLIPIGNPNILINSICYIEMDAIAKREVAVLYLDGIP 
Subjt:  VVGKPSSWSFWRDNCLGKFAISHRILRGDSLASLAVKYSVQVTDIKRLNNMMSDHGIYSRERLLIPIGNPNILINSICYIEMDAIAKREVAVLYLDGIPM

Query:  THHLYGKVTCEQGMSSVQVNKRVLHSLSRSMMVDDETAQYYLSISNGDPRAALTEFAEDIRWERHMSIA
        THHLYGKVTCEQGMSSVQVNK+VLHSLSRSMMVDDETA+YYLSIS+GDPRAALTEFAEDIRWERHMSIA
Subjt:  THHLYGKVTCEQGMSSVQVNKRVLHSLSRSMMVDDETAQYYLSISNGDPRAALTEFAEDIRWERHMSIA

XP_022937590.1 F-box protein At1g55000 [Cucurbita moschata]8.7e-13490.37Show/hide
Query:  MGCCCEQDDDVEILRHLNPSPAVQSLPPQPPP-ADSSTAVLSPMNSHFFALSCRDILRLIFENLSISDLARSSCVCRLWHSVASDQEIVSGAFKAPWKVK
        MGCCC++DDDVEILRHL+PSP VQS P Q P   DSSTAVLSPMNSHFFALSCRDILRLIFE LSI DLARSSCV RLW+SVASDQEIVSGAFKAPWKVK
Subjt:  MGCCCEQDDDVEILRHLNPSPAVQSLPPQPPP-ADSSTAVLSPMNSHFFALSCRDILRLIFENLSISDLARSSCVCRLWHSVASDQEIVSGAFKAPWKVK

Query:  DVVGKPSSWSFWRDNCLGKFAISHRILRGDSLASLAVKYSVQVTDIKRLNNMMSDHGIYSRERLLIPIGNPNILINSICYIEMDAIAKREVAVLYLDGIP
        DV+GKPSS SFWRDNCLGKFAISHRILRGDSLASLAVKYSVQV DIKRLNNMMSDHGIYSRERLLIPIGNPNILINSICYIEMDAIAKREVA LYLDGIP
Subjt:  DVVGKPSSWSFWRDNCLGKFAISHRILRGDSLASLAVKYSVQVTDIKRLNNMMSDHGIYSRERLLIPIGNPNILINSICYIEMDAIAKREVAVLYLDGIP

Query:  MTHHLYGKVTCEQGMSSVQVNKRVLHSLSRSMMVDDETAQYYLSISNGDPRAALTEFAEDIRWERHMSIA
         THHLYGK T +QGMSSVQV KRVLHSLSRSMMVDDETAQYYLSIS+GDPRAALTEFAEDIRWERHM +A
Subjt:  MTHHLYGKVTCEQGMSSVQVNKRVLHSLSRSMMVDDETAQYYLSISNGDPRAALTEFAEDIRWERHMSIA

XP_038877035.1 F-box protein At1g55000 [Benincasa hispida]7.1e-14494.42Show/hide
Query:  MGCCCEQDDDVEILRHLNPSPAVQSLPPQPPPADSSTAVLSPMNSHFFALSCRDILRLIFENLSISDLARSSCVCRLWHSVASDQEIVSGAFKAPWKVKD
        MGCCC+QDDDVEILRHLNPSP VQSLPP+PPP DSS  VLSPMNSHF ALSCRDILRLIFENLSI DLARSSCV RLWHSVASDQEIVSGAFKAPWKVKD
Subjt:  MGCCCEQDDDVEILRHLNPSPAVQSLPPQPPPADSSTAVLSPMNSHFFALSCRDILRLIFENLSISDLARSSCVCRLWHSVASDQEIVSGAFKAPWKVKD

Query:  VVGKPSSWSFWRDNCLGKFAISHRILRGDSLASLAVKYSVQVTDIKRLNNMMSDHGIYSRERLLIPIGNPNILINSICYIEMDAIAKREVAVLYLDGIPM
        VVGKPSSWSFWRDNCLGKFAISHRILRGDSLASLAVKYSVQVTDIKRLNNM+SDHGIYSRERLLIPIGNPNILINSICYIEMDAIAKREVAVLYLDGIP+
Subjt:  VVGKPSSWSFWRDNCLGKFAISHRILRGDSLASLAVKYSVQVTDIKRLNNMMSDHGIYSRERLLIPIGNPNILINSICYIEMDAIAKREVAVLYLDGIPM

Query:  THHLYGKVTCEQGMSSVQVNKRVLHSLSRSMMVDDETAQYYLSISNGDPRAALTEFAEDIRWERHMSIA
        THHLYGK TCE+GMSSVQVNKRVLH LSRSMMVDDETAQYYLSISNGDPRAALTEFAEDIRWERH+SIA
Subjt:  THHLYGKVTCEQGMSSVQVNKRVLHSLSRSMMVDDETAQYYLSISNGDPRAALTEFAEDIRWERHMSIA

TrEMBL top hitse value%identityAlignment
A0A0A0LFS6 LysM domain-containing protein1.1e-14595.54Show/hide
Query:  MGCCCEQDDDVEILRHLNPSPAVQSLPPQPPPADSSTAVLSPMNSHFFALSCRDILRLIFENLSISDLARSSCVCRLWHSVASDQEIVSGAFKAPWKVKD
        MGCCC+QDDDVEILRHLNPSPA+ S PPQPPPAD S A+LSPMNSHFFALSCRDILRLIFENLSI DLARSSCVCRLWHSVASDQEIVSGAFKAPWKVKD
Subjt:  MGCCCEQDDDVEILRHLNPSPAVQSLPPQPPPADSSTAVLSPMNSHFFALSCRDILRLIFENLSISDLARSSCVCRLWHSVASDQEIVSGAFKAPWKVKD

Query:  VVGKPSSWSFWRDNCLGKFAISHRILRGDSLASLAVKYSVQVTDIKRLNNMMSDHGIYSRERLLIPIGNPNILINSICYIEMDAIAKREVAVLYLDGIPM
        VVGKPSSWSFWRDNCLGKFAISHRILRGDSLASLAVKYSVQVTDIKRLNNMMSDHGIYSRERLLIPIGNPN+LINSICYIEMDAIAKREVAVLYLDGIPM
Subjt:  VVGKPSSWSFWRDNCLGKFAISHRILRGDSLASLAVKYSVQVTDIKRLNNMMSDHGIYSRERLLIPIGNPNILINSICYIEMDAIAKREVAVLYLDGIPM

Query:  THHLYGKVTCEQGMSSVQVNKRVLHSLSRSMMVDDETAQYYLSISNGDPRAALTEFAEDIRWERHMSIA
        T HLYGKVT EQGMSSVQVNKRVLHSLSRSMMVDDETAQYYLSISNG+PRAALTEFAEDIRWERHMSIA
Subjt:  THHLYGKVTCEQGMSSVQVNKRVLHSLSRSMMVDDETAQYYLSISNGDPRAALTEFAEDIRWERHMSIA

A0A5A7TYE5 Lipoxygenase1.3e-11494.5Show/hide
Query:  MGCCCEQDDDVEILRHLNPSPAVQSLPPQPPPADSSTAVLSPMNSHFFALSCRDILRLIFENLSISDLARSSCVCRLWHSVASDQEIVSGAFKAPWKVKD
        MGCCC+QDDDVEILRHLNPSP V S P QPPPAD STA+LSPMNSHFFALSCRDILRLIFE+LSI DLARSSCVCRLWHSVASDQEIV+GAFKAPWKVKD
Subjt:  MGCCCEQDDDVEILRHLNPSPAVQSLPPQPPPADSSTAVLSPMNSHFFALSCRDILRLIFENLSISDLARSSCVCRLWHSVASDQEIVSGAFKAPWKVKD

Query:  VVGKPSSWSFWRDNCLGKFAISHRILRGDSLASLAVKYSVQVTDIKRLNNMMSDHGIYSRERLLIPIGNPNILINSICYIEMDAIAKREVAVLYLDGIPM
        VVGKPSSWSFWRDNCLGKFAISHRILRGDSLASLAVKYSVQVTDIKRLNNMMSDHGIYSRERLLIPIGNPNILINSICYIEMDAIAKREVAVLYLDGIPM
Subjt:  VVGKPSSWSFWRDNCLGKFAISHRILRGDSLASLAVKYSVQVTDIKRLNNMMSDHGIYSRERLLIPIGNPNILINSICYIEMDAIAKREVAVLYLDGIPM

Query:  THHLYGKVTCEQGMSSVQ
        T HLYGKVT EQGMSSVQ
Subjt:  THHLYGKVTCEQGMSSVQ

A0A6J1D9A3 F-box protein At1g550008.2e-13891.82Show/hide
Query:  MGCCCEQDDDVEILRHLNPSPAVQSLPPQPPPADSSTAVLSPMNSHFFALSCRDILRLIFENLSISDLARSSCVCRLWHSVASDQEIVSGAFKAPWKVKD
        MGCCC+QDDDVEILRHLNP+ AV S    PP ADSSTAVLSPMNSHFFALSCRDILRLIFE LSI DLARSSCVCRLW SVASD EIV+GAFKAPWK+KD
Subjt:  MGCCCEQDDDVEILRHLNPSPAVQSLPPQPPPADSSTAVLSPMNSHFFALSCRDILRLIFENLSISDLARSSCVCRLWHSVASDQEIVSGAFKAPWKVKD

Query:  VVGKPSSWSFWRDNCLGKFAISHRILRGDSLASLAVKYSVQVTDIKRLNNMMSDHGIYSRERLLIPIGNPNILINSICYIEMDAIAKREVAVLYLDGIPM
        V+GKPSS SFWRDNCLGKFAISHRILRGDSLASLAVKYSVQV DIKRLNNMMSDHGIYSRERLLIPIGNPNILINSICYIEMDAIAKREVAVLYLDGIP 
Subjt:  VVGKPSSWSFWRDNCLGKFAISHRILRGDSLASLAVKYSVQVTDIKRLNNMMSDHGIYSRERLLIPIGNPNILINSICYIEMDAIAKREVAVLYLDGIPM

Query:  THHLYGKVTCEQGMSSVQVNKRVLHSLSRSMMVDDETAQYYLSISNGDPRAALTEFAEDIRWERHMSIA
        THHLYGKVTCEQGMSSVQVNK+VLHSLSRSMMVDDETA+YYLSIS+GDPRAALTEFAEDIRWERHMSIA
Subjt:  THHLYGKVTCEQGMSSVQVNKRVLHSLSRSMMVDDETAQYYLSISNGDPRAALTEFAEDIRWERHMSIA

A0A6J1FH66 F-box protein At1g550004.2e-13490.37Show/hide
Query:  MGCCCEQDDDVEILRHLNPSPAVQSLPPQPPP-ADSSTAVLSPMNSHFFALSCRDILRLIFENLSISDLARSSCVCRLWHSVASDQEIVSGAFKAPWKVK
        MGCCC++DDDVEILRHL+PSP VQS P Q P   DSSTAVLSPMNSHFFALSCRDILRLIFE LSI DLARSSCV RLW+SVASDQEIVSGAFKAPWKVK
Subjt:  MGCCCEQDDDVEILRHLNPSPAVQSLPPQPPP-ADSSTAVLSPMNSHFFALSCRDILRLIFENLSISDLARSSCVCRLWHSVASDQEIVSGAFKAPWKVK

Query:  DVVGKPSSWSFWRDNCLGKFAISHRILRGDSLASLAVKYSVQVTDIKRLNNMMSDHGIYSRERLLIPIGNPNILINSICYIEMDAIAKREVAVLYLDGIP
        DV+GKPSS SFWRDNCLGKFAISHRILRGDSLASLAVKYSVQV DIKRLNNMMSDHGIYSRERLLIPIGNPNILINSICYIEMDAIAKREVA LYLDGIP
Subjt:  DVVGKPSSWSFWRDNCLGKFAISHRILRGDSLASLAVKYSVQVTDIKRLNNMMSDHGIYSRERLLIPIGNPNILINSICYIEMDAIAKREVAVLYLDGIP

Query:  MTHHLYGKVTCEQGMSSVQVNKRVLHSLSRSMMVDDETAQYYLSISNGDPRAALTEFAEDIRWERHMSIA
         THHLYGK T +QGMSSVQV KRVLHSLSRSMMVDDETAQYYLSIS+GDPRAALTEFAEDIRWERHM +A
Subjt:  MTHHLYGKVTCEQGMSSVQVNKRVLHSLSRSMMVDDETAQYYLSISNGDPRAALTEFAEDIRWERHMSIA

A0A6J1HS58 F-box protein At1g550004.7e-13389.63Show/hide
Query:  MGCCCEQDDDVEILRHLNPSPAVQSLPPQPPP-ADSSTAVLSPMNSHFFALSCRDILRLIFENLSISDLARSSCVCRLWHSVASDQEIVSGAFKAPWKVK
        MGCCC++DDDVEILRHL+PSP VQS P Q P    SSTAVLSPMNSHFFALSCRDILRLIFE LSI DLARSSCV RLW+SVASDQEIVSGAFKAPWKVK
Subjt:  MGCCCEQDDDVEILRHLNPSPAVQSLPPQPPP-ADSSTAVLSPMNSHFFALSCRDILRLIFENLSISDLARSSCVCRLWHSVASDQEIVSGAFKAPWKVK

Query:  DVVGKPSSWSFWRDNCLGKFAISHRILRGDSLASLAVKYSVQVTDIKRLNNMMSDHGIYSRERLLIPIGNPNILINSICYIEMDAIAKREVAVLYLDGIP
        DV+GKPSS SFWRDNCLGKFAISHRILRGDSLASLAVKYSVQV DIKRLNNMMSDHGIYSRER+LIPIGNPNILINSICYIEMDAIAKREVA LYLDGIP
Subjt:  DVVGKPSSWSFWRDNCLGKFAISHRILRGDSLASLAVKYSVQVTDIKRLNNMMSDHGIYSRERLLIPIGNPNILINSICYIEMDAIAKREVAVLYLDGIP

Query:  MTHHLYGKVTCEQGMSSVQVNKRVLHSLSRSMMVDDETAQYYLSISNGDPRAALTEFAEDIRWERHMSIA
         THHLYGK T +QGMSSVQV KRVLHSLSRSMMVDDETAQYYLSIS+GDPRAALTEFAEDIRWERHM +A
Subjt:  MTHHLYGKVTCEQGMSSVQVNKRVLHSLSRSMMVDDETAQYYLSISNGDPRAALTEFAEDIRWERHMSIA

SwissProt top hitse value%identityAlignment
Q6DEF4 LysM and putative peptidoglycan-binding domain-containing protein 26.7e-0440.38Show/hide
Query:  LGKFAISHRILRGDSLASLAVKYSVQVTDIKRLNNMMSDHGIYSRERLLIPI
        LG+  I HR+  G++L  +A+KY V +  IKR+N + S+  I+ R  L IP+
Subjt:  LGKFAISHRILRGDSLASLAVKYSVQVTDIKRLNNMMSDHGIYSRERLLIPI

Q7Z3D4 LysM and putative peptidoglycan-binding domain-containing protein 38.8e-0431.34Show/hide
Query:  RDNCLGKFAISHRILRGDSLASLAVKYSVQVTDIKRLNNMMSDHGIYSRERLLIPIGNPNILINSIC
        RD       ++  I  GD+L ++A++Y   V DIKR+NN++SD   ++   + IP+   + L  ++C
Subjt:  RDNCLGKFAISHRILRGDSLASLAVKYSVQVTDIKRLNNMMSDHGIYSRERLLIPIGNPNILINSIC

Q9FZ32 F-box protein At1g550002.8e-7460.91Show/hide
Query:  ALSCRDILRLIFENLSISDLARSSCVCRLWHSVASDQEIVSGAFKAPWKVKDVVGKPSSWSFWRDNCLGKFAISHRILRGDSLASLAVKYSVQVTDIKRL
        AL CRD L +IF+ L+++DLAR+SCVC++W+SVA++ ++V  AF APW++K++VG+P+S SFWRDN + KFAISHRI RGDS+ SLAVKY+VQV DIKRL
Subjt:  ALSCRDILRLIFENLSISDLARSSCVCRLWHSVASDQEIVSGAFKAPWKVKDVVGKPSSWSFWRDNCLGKFAISHRILRGDSLASLAVKYSVQVTDIKRL

Query:  NNMMSDHGIYSRERLLIPIGNPNILINSICYIEMDAIAKREVAVLYLDGIPMTHHLYGKVTCEQGMSSVQVNKRVLHSLSRSMMVDDETAQYYLSISNGD
        NNMMSDHGIYSR+RLLIPI NP IL N+ CY+E+D  AKREVAVLYL+G P         T +Q   S    +R++ SL RSM VDD TA YYL+I+ GD
Subjt:  NNMMSDHGIYSRERLLIPIGNPNILINSICYIEMDAIAKREVAVLYLDGIPMTHHLYGKVTCEQGMSSVQVNKRVLHSLSRSMMVDDETAQYYLSISNGD

Query:  PRAALTEFAEDIRWERHMSI
        PR+AL+EF+ D+RWER   +
Subjt:  PRAALTEFAEDIRWERHMSI

Arabidopsis top hitse value%identityAlignment
AT1G55000.1 peptidoglycan-binding LysM domain-containing protein2.0e-7560.91Show/hide
Query:  ALSCRDILRLIFENLSISDLARSSCVCRLWHSVASDQEIVSGAFKAPWKVKDVVGKPSSWSFWRDNCLGKFAISHRILRGDSLASLAVKYSVQVTDIKRL
        AL CRD L +IF+ L+++DLAR+SCVC++W+SVA++ ++V  AF APW++K++VG+P+S SFWRDN + KFAISHRI RGDS+ SLAVKY+VQV DIKRL
Subjt:  ALSCRDILRLIFENLSISDLARSSCVCRLWHSVASDQEIVSGAFKAPWKVKDVVGKPSSWSFWRDNCLGKFAISHRILRGDSLASLAVKYSVQVTDIKRL

Query:  NNMMSDHGIYSRERLLIPIGNPNILINSICYIEMDAIAKREVAVLYLDGIPMTHHLYGKVTCEQGMSSVQVNKRVLHSLSRSMMVDDETAQYYLSISNGD
        NNMMSDHGIYSR+RLLIPI NP IL N+ CY+E+D  AKREVAVLYL+G P         T +Q   S    +R++ SL RSM VDD TA YYL+I+ GD
Subjt:  NNMMSDHGIYSRERLLIPIGNPNILINSICYIEMDAIAKREVAVLYLDGIPMTHHLYGKVTCEQGMSSVQVNKRVLHSLSRSMMVDDETAQYYLSISNGD

Query:  PRAALTEFAEDIRWERHMSI
        PR+AL+EF+ D+RWER   +
Subjt:  PRAALTEFAEDIRWERHMSI

AT1G55000.2 peptidoglycan-binding LysM domain-containing protein2.0e-7560.91Show/hide
Query:  ALSCRDILRLIFENLSISDLARSSCVCRLWHSVASDQEIVSGAFKAPWKVKDVVGKPSSWSFWRDNCLGKFAISHRILRGDSLASLAVKYSVQVTDIKRL
        AL CRD L +IF+ L+++DLAR+SCVC++W+SVA++ ++V  AF APW++K++VG+P+S SFWRDN + KFAISHRI RGDS+ SLAVKY+VQV DIKRL
Subjt:  ALSCRDILRLIFENLSISDLARSSCVCRLWHSVASDQEIVSGAFKAPWKVKDVVGKPSSWSFWRDNCLGKFAISHRILRGDSLASLAVKYSVQVTDIKRL

Query:  NNMMSDHGIYSRERLLIPIGNPNILINSICYIEMDAIAKREVAVLYLDGIPMTHHLYGKVTCEQGMSSVQVNKRVLHSLSRSMMVDDETAQYYLSISNGD
        NNMMSDHGIYSR+RLLIPI NP IL N+ CY+E+D  AKREVAVLYL+G P         T +Q   S    +R++ SL RSM VDD TA YYL+I+ GD
Subjt:  NNMMSDHGIYSRERLLIPIGNPNILINSICYIEMDAIAKREVAVLYLDGIPMTHHLYGKVTCEQGMSSVQVNKRVLHSLSRSMMVDDETAQYYLSISNGD

Query:  PRAALTEFAEDIRWERHMSI
        PR+AL+EF+ D+RWER   +
Subjt:  PRAALTEFAEDIRWERHMSI

AT1G55000.3 peptidoglycan-binding LysM domain-containing protein2.0e-7560.91Show/hide
Query:  ALSCRDILRLIFENLSISDLARSSCVCRLWHSVASDQEIVSGAFKAPWKVKDVVGKPSSWSFWRDNCLGKFAISHRILRGDSLASLAVKYSVQVTDIKRL
        AL CRD L +IF+ L+++DLAR+SCVC++W+SVA++ ++V  AF APW++K++VG+P+S SFWRDN + KFAISHRI RGDS+ SLAVKY+VQV DIKRL
Subjt:  ALSCRDILRLIFENLSISDLARSSCVCRLWHSVASDQEIVSGAFKAPWKVKDVVGKPSSWSFWRDNCLGKFAISHRILRGDSLASLAVKYSVQVTDIKRL

Query:  NNMMSDHGIYSRERLLIPIGNPNILINSICYIEMDAIAKREVAVLYLDGIPMTHHLYGKVTCEQGMSSVQVNKRVLHSLSRSMMVDDETAQYYLSISNGD
        NNMMSDHGIYSR+RLLIPI NP IL N+ CY+E+D  AKREVAVLYL+G P         T +Q   S    +R++ SL RSM VDD TA YYL+I+ GD
Subjt:  NNMMSDHGIYSRERLLIPIGNPNILINSICYIEMDAIAKREVAVLYLDGIPMTHHLYGKVTCEQGMSSVQVNKRVLHSLSRSMMVDDETAQYYLSISNGD

Query:  PRAALTEFAEDIRWERHMSI
        PR+AL+EF+ D+RWER   +
Subjt:  PRAALTEFAEDIRWERHMSI

AT5G08200.1 peptidoglycan-binding LysM domain-containing protein1.1e-0638.71Show/hide
Query:  SSWSFWRDNCLGKFAISHRILRGDSLASLAVKYSVQVTDIKRLNNMMSDHGIYSRERLLIPI
        SS  F   N   +  I HRI + D+LA +A+KY V+V D+K++NN+++D  +++ + L IP+
Subjt:  SSWSFWRDNCLGKFAISHRILRGDSLASLAVKYSVQVTDIKRLNNMMSDHGIYSRERLLIPI

AT5G23130.1 Peptidoglycan-binding LysM domain-containing protein1.3e-0542.55Show/hide
Query:  ISHRILRGDSLASLAVKYSVQVTDIKRLNNMMSDHGIYSRERLLIPI
        I HR+ + D+LA +A+KY V+V DI +LN +++D  +++ E L IP+
Subjt:  ISHRILRGDSLASLAVKYSVQVTDIKRLNNMMSDHGIYSRERLLIPI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGATGCTGTTGCGAACAAGATGACGACGTTGAGATCCTCAGGCACCTCAATCCCTCGCCCGCCGTTCAGTCTCTCCCGCCCCAACCTCCACCGGCCGATTCCTCCAC
TGCCGTACTGTCTCCGATGAATTCTCACTTTTTCGCCCTCTCCTGCCGCGACATCCTCCGCCTCATCTTCGAGAACCTTTCCATCTCCGATTTGGCTCGTTCCAGCTGCG
TTTGCCGTCTTTGGCACTCCGTTGCTTCCGATCAGGAAATTGTCTCCGGAGCTTTCAAAGCGCCGTGGAAGGTGAAGGATGTGGTCGGCAAGCCGAGCTCCTGGAGCTTC
TGGAGAGATAATTGCCTTGGGAAGTTTGCGATCTCTCATCGAATTCTCCGCGGCGATAGCTTGGCTAGTCTAGCCGTCAAGTATTCGGTTCAGGTTACAGACATAAAACG
TCTGAACAACATGATGAGCGACCATGGCATATACTCGAGAGAAAGATTGTTAATCCCCATTGGCAATCCCAATATACTCATTAACAGTATATGCTACATCGAGATGGATG
CTATTGCGAAACGAGAAGTTGCAGTATTGTATTTGGATGGAATCCCCATGACCCATCATTTGTATGGTAAAGTGACATGCGAACAGGGTATGTCTTCTGTTCAAGTGAAC
AAGCGGGTACTTCATTCGTTGAGTCGGAGCATGATGGTCGATGACGAAACCGCTCAATATTACTTATCTATTTCCAATGGCGATCCTCGAGCAGCTCTTACTGAATTCGC
TGAGGACATCAGGTGGGAGAGGCATATGAGCATTGCCTAG
mRNA sequenceShow/hide mRNA sequence
ATGGGATGCTGTTGCGAACAAGATGACGACGTTGAGATCCTCAGGCACCTCAATCCCTCGCCCGCCGTTCAGTCTCTCCCGCCCCAACCTCCACCGGCCGATTCCTCCAC
TGCCGTACTGTCTCCGATGAATTCTCACTTTTTCGCCCTCTCCTGCCGCGACATCCTCCGCCTCATCTTCGAGAACCTTTCCATCTCCGATTTGGCTCGTTCCAGCTGCG
TTTGCCGTCTTTGGCACTCCGTTGCTTCCGATCAGGAAATTGTCTCCGGAGCTTTCAAAGCGCCGTGGAAGGTGAAGGATGTGGTCGGCAAGCCGAGCTCCTGGAGCTTC
TGGAGAGATAATTGCCTTGGGAAGTTTGCGATCTCTCATCGAATTCTCCGCGGCGATAGCTTGGCTAGTCTAGCCGTCAAGTATTCGGTTCAGGTTACAGACATAAAACG
TCTGAACAACATGATGAGCGACCATGGCATATACTCGAGAGAAAGATTGTTAATCCCCATTGGCAATCCCAATATACTCATTAACAGTATATGCTACATCGAGATGGATG
CTATTGCGAAACGAGAAGTTGCAGTATTGTATTTGGATGGAATCCCCATGACCCATCATTTGTATGGTAAAGTGACATGCGAACAGGGTATGTCTTCTGTTCAAGTGAAC
AAGCGGGTACTTCATTCGTTGAGTCGGAGCATGATGGTCGATGACGAAACCGCTCAATATTACTTATCTATTTCCAATGGCGATCCTCGAGCAGCTCTTACTGAATTCGC
TGAGGACATCAGGTGGGAGAGGCATATGAGCATTGCCTAG
Protein sequenceShow/hide protein sequence
MGCCCEQDDDVEILRHLNPSPAVQSLPPQPPPADSSTAVLSPMNSHFFALSCRDILRLIFENLSISDLARSSCVCRLWHSVASDQEIVSGAFKAPWKVKDVVGKPSSWSF
WRDNCLGKFAISHRILRGDSLASLAVKYSVQVTDIKRLNNMMSDHGIYSRERLLIPIGNPNILINSICYIEMDAIAKREVAVLYLDGIPMTHHLYGKVTCEQGMSSVQVN
KRVLHSLSRSMMVDDETAQYYLSISNGDPRAALTEFAEDIRWERHMSIA