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HG10006427 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10006427
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionTMV resistance protein N-like
Genome locationChr07:18481693..18481962
RNA-Seq ExpressionHG10006427
SyntenyHG10006427
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008455000.2 PREDICTED: TMV resistance protein N-like isoform X2 [Cucumis melo]5.3e-1152.69Show/hide
Query:  MWLIVLYPHRDFDPKIWNDIMETSPEIDLRQPSFRINSRELDYNNEDDEDDCTSS--GESIRKKVTVSFEL--RFNFYEVSINRCGVHVIMEE
        MWL+VLYPH +F     +DI+  S EI+L QPSF INS   D NN + +DD   +  GESI +K TVSF +  +F   E+SI  CGVHVIMEE
Subjt:  MWLIVLYPHRDFDPKIWNDIMETSPEIDLRQPSFRINSRELDYNNEDDEDDCTSS--GESIRKKVTVSFEL--RFNFYEVSINRCGVHVIMEE

XP_008465653.2 PREDICTED: TMV resistance protein N-like [Cucumis melo]4.0e-1154.84Show/hide
Query:  MWLIVLYPHRDFDPKIWNDIMETSPEIDLRQPSFRI-NSRELDYNNEDDEDDCTSS-GESIRKKVTVSFEL--RFNFYEVSINRCGVHVIMEE
        MWL+VLYPH DF P   +DI++ S EI+L QPSF I NS   D NN + +DD  +  GES   K TVSF +  ++   EVSI RCGVHVIMEE
Subjt:  MWLIVLYPHRDFDPKIWNDIMETSPEIDLRQPSFRI-NSRELDYNNEDDEDDCTSS-GESIRKKVTVSFEL--RFNFYEVSINRCGVHVIMEE

XP_011648801.1 TMV resistance protein N isoform X2 [Cucumis sativus]2.4e-1154.84Show/hide
Query:  MWLIVLYPHRDFDPKIWNDIMETSPE-IDLRQPSFRINSRELDYNNEDDEDDCTSS-GESIRKKVTVSFEL--RFNFYEVSINRCGVHVIMEE
        MWL+VLYPH DF P    DI++ S E  +L QPSF INS   D NN + +DD  +  GESI +K TVSF +  +F   +VSI RCGVHVIMEE
Subjt:  MWLIVLYPHRDFDPKIWNDIMETSPE-IDLRQPSFRINSRELDYNNEDDEDDCTSS-GESIRKKVTVSFEL--RFNFYEVSINRCGVHVIMEE

XP_031737216.1 TMV resistance protein N isoform X3 [Cucumis sativus]2.4e-1154.84Show/hide
Query:  MWLIVLYPHRDFDPKIWNDIMETSPE-IDLRQPSFRINSRELDYNNEDDEDDCTSS-GESIRKKVTVSFEL--RFNFYEVSINRCGVHVIMEE
        MWL+VLYPH DF P    DI++ S E  +L QPSF INS   D NN + +DD  +  GESI +K TVSF +  +F   +VSI RCGVHVIMEE
Subjt:  MWLIVLYPHRDFDPKIWNDIMETSPE-IDLRQPSFRINSRELDYNNEDDEDDCTSS-GESIRKKVTVSFEL--RFNFYEVSINRCGVHVIMEE

XP_038876369.1 LOW QUALITY PROTEIN: TMV resistance protein N-like [Benincasa hispida]1.5e-1357.14Show/hide
Query:  MWLIVLYPHRDFDPKIWNDIMETSPEIDLRQPSFRINSRELDYNNEDDEDDCTSSGESIRKKVTVSFELRFNFYE--VSINRCGVHVIMEE
        MWLIVL PHRDF  + W+D+ME SPEID   P F  NS E+D N  +  DD    G SI KK TVSFEL   F +  +SI  CGVHVIMEE
Subjt:  MWLIVLYPHRDFDPKIWNDIMETSPEIDLRQPSFRINSRELDYNNEDDEDDCTSSGESIRKKVTVSFELRFNFYE--VSINRCGVHVIMEE

TrEMBL top hitse value%identityAlignment
A0A0A0LFP7 TIR domain-containing protein1.1e-1154.84Show/hide
Query:  MWLIVLYPHRDFDPKIWNDIMETSPE-IDLRQPSFRINSRELDYNNEDDEDDCTSS-GESIRKKVTVSFEL--RFNFYEVSINRCGVHVIMEE
        MWL+VLYPH DF P    DI++ S E  +L QPSF INS   D NN + +DD  +  GESI +K TVSF +  +F   +VSI RCGVHVIMEE
Subjt:  MWLIVLYPHRDFDPKIWNDIMETSPE-IDLRQPSFRINSRELDYNNEDDEDDCTSS-GESIRKKVTVSFEL--RFNFYEVSINRCGVHVIMEE

A0A1S3C131 TMV resistance protein N-like isoform X22.6e-1152.69Show/hide
Query:  MWLIVLYPHRDFDPKIWNDIMETSPEIDLRQPSFRINSRELDYNNEDDEDDCTSS--GESIRKKVTVSFEL--RFNFYEVSINRCGVHVIMEE
        MWL+VLYPH +F     +DI+  S EI+L QPSF INS   D NN + +DD   +  GESI +K TVSF +  +F   E+SI  CGVHVIMEE
Subjt:  MWLIVLYPHRDFDPKIWNDIMETSPEIDLRQPSFRINSRELDYNNEDDEDDCTSS--GESIRKKVTVSFEL--RFNFYEVSINRCGVHVIMEE

A0A1S3CPD4 TMV resistance protein N-like2.0e-1154.84Show/hide
Query:  MWLIVLYPHRDFDPKIWNDIMETSPEIDLRQPSFRI-NSRELDYNNEDDEDDCTSS-GESIRKKVTVSFEL--RFNFYEVSINRCGVHVIMEE
        MWL+VLYPH DF P   +DI++ S EI+L QPSF I NS   D NN + +DD  +  GES   K TVSF +  ++   EVSI RCGVHVIMEE
Subjt:  MWLIVLYPHRDFDPKIWNDIMETSPEIDLRQPSFRI-NSRELDYNNEDDEDDCTSS-GESIRKKVTVSFEL--RFNFYEVSINRCGVHVIMEE

A0A1S4DZW3 TMV resistance protein N-like isoform X12.6e-1152.69Show/hide
Query:  MWLIVLYPHRDFDPKIWNDIMETSPEIDLRQPSFRINSRELDYNNEDDEDDCTSS--GESIRKKVTVSFEL--RFNFYEVSINRCGVHVIMEE
        MWL+VLYPH +F     +DI+  S EI+L QPSF INS   D NN + +DD   +  GESI +K TVSF +  +F   E+SI  CGVHVIMEE
Subjt:  MWLIVLYPHRDFDPKIWNDIMETSPEIDLRQPSFRINSRELDYNNEDDEDDCTSS--GESIRKKVTVSFEL--RFNFYEVSINRCGVHVIMEE

D9I8I6 TIR-CC-NBS-AAA+ATPase class resistance protein2.6e-1152.81Show/hide
Query:  WLIVLYPHRDFDPKIWNDIMETSPEIDLRQPSFRINSRELDYNNEDDEDDCTSSGESIRKKVTVSFELR--FNFYEVSINRCGVHVIME
        W IVL PHRDF    W+D+ME SPE DL Q  F INS E+D N  +D+    S G SI K  TV FE R       +SI  CGVHVIME
Subjt:  WLIVLYPHRDFDPKIWNDIMETSPEIDLRQPSFRINSRELDYNNEDDEDDCTSSGESIRKKVTVSFELR--FNFYEVSINRCGVHVIME

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGGTTGATAGTACTTTATCCTCATAGAGATTTTGACCCAAAAATTTGGAATGATATTATGGAGACATCACCGGAGATTGATCTACGTCAACCAAGTTTTAGGATCAA
TTCAAGGGAATTGGACTACAATAATGAAGATGATGAGGATGATTGTACTTCTTCTGGGGAAAGTATTAGGAAGAAAGTTACGGTTTCATTTGAGTTGCGTTTCAATTTTT
ATGAAGTGAGTATAAATAGATGTGGTGTTCATGTTATCATGGAGGAATGA
mRNA sequenceShow/hide mRNA sequence
ATGTGGTTGATAGTACTTTATCCTCATAGAGATTTTGACCCAAAAATTTGGAATGATATTATGGAGACATCACCGGAGATTGATCTACGTCAACCAAGTTTTAGGATCAA
TTCAAGGGAATTGGACTACAATAATGAAGATGATGAGGATGATTGTACTTCTTCTGGGGAAAGTATTAGGAAGAAAGTTACGGTTTCATTTGAGTTGCGTTTCAATTTTT
ATGAAGTGAGTATAAATAGATGTGGTGTTCATGTTATCATGGAGGAATGA
Protein sequenceShow/hide protein sequence
MWLIVLYPHRDFDPKIWNDIMETSPEIDLRQPSFRINSRELDYNNEDDEDDCTSSGESIRKKVTVSFELRFNFYEVSINRCGVHVIMEE