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HG10006428 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10006428
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionTMV resistance protein N-like
Genome locationChr07:18494058..18494324
RNA-Seq ExpressionHG10006428
SyntenyHG10006428
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ADI99936.1 TIR-CC-NBS-AAA+ATPase class resistance protein [Cucumis sativus]1.7e-0949.44Show/hide
Query:  MVLYPHRDFDQKIWDDILETSAEIDLWQPSFRINSMELDYNNEDDNDDDDYTCCGESIRKKVTVSFEVPPSYYE--VSIIRCGVHVIME
        +VL PHRDF    WDD++E S E DL Q  F INSME+D N  +D     +   G SI K  TV FE  P   +  +SI  CGVHVIME
Subjt:  MVLYPHRDFDQKIWDDILETSAEIDLWQPSFRINSMELDYNNEDDNDDDDYTCCGESIRKKVTVSFEVPPSYYE--VSIIRCGVHVIME

XP_008455000.2 PREDICTED: TMV resistance protein N-like isoform X2 [Cucumis melo]7.5e-1052.22Show/hide
Query:  MVLYPHRDFDQKIWDDILETSAEIDLWQPSFRINSMELDYNNEDDNDDDDYTCCGESIRKKVTVSFEVPPSY--YEVSIIRCGVHVIMEE
        +VLYPH +F     DDI+  S EI+L QPSF INS+  D NN + +DD      GESI +K TVSF V   +   E+SI  CGVHVIMEE
Subjt:  MVLYPHRDFDQKIWDDILETSAEIDLWQPSFRINSMELDYNNEDDNDDDDYTCCGESIRKKVTVSFEVPPSY--YEVSIIRCGVHVIMEE

XP_008465653.2 PREDICTED: TMV resistance protein N-like [Cucumis melo]5.8e-1057.14Show/hide
Query:  MVLYPHRDFDQKIWDDILETSAEIDLWQPSFRI-NSMELDYNNEDDNDDDDYTCCGESIRKKVTVSFEVPPSY--YEVSIIRCGVHVIMEE
        +VLYPH DF     DDI++ S EI+L QPSF I NSM  D NN  + DDD     GES   K TVSF V   Y   EVSI RCGVHVIMEE
Subjt:  MVLYPHRDFDQKIWDDILETSAEIDLWQPSFRI-NSMELDYNNEDDNDDDDYTCCGESIRKKVTVSFEVPPSY--YEVSIIRCGVHVIMEE

XP_016901532.1 PREDICTED: TMV resistance protein N-like isoform X1 [Cucumis melo]7.5e-1052.22Show/hide
Query:  MVLYPHRDFDQKIWDDILETSAEIDLWQPSFRINSMELDYNNEDDNDDDDYTCCGESIRKKVTVSFEVPPSY--YEVSIIRCGVHVIMEE
        +VLYPH +F     DDI+  S EI+L QPSF INS+  D NN + +DD      GESI +K TVSF V   +   E+SI  CGVHVIMEE
Subjt:  MVLYPHRDFDQKIWDDILETSAEIDLWQPSFRINSMELDYNNEDDNDDDDYTCCGESIRKKVTVSFEVPPSY--YEVSIIRCGVHVIMEE

XP_038876369.1 LOW QUALITY PROTEIN: TMV resistance protein N-like [Benincasa hispida]1.2e-1253.33Show/hide
Query:  MVLYPHRDFDQKIWDDILETSAEIDLWQPSFRINSMELDYNNEDDNDDDDYTCCGESIRKKVTVSFEVPPSYYE--VSIIRCGVHVIMEE
        +VL PHRDF Q  WDD++E S EID   P F  NSME+D    D+  +DD+   G SI KK TVSFE+ P + +  +SI  CGVHVIMEE
Subjt:  MVLYPHRDFDQKIWDDILETSAEIDLWQPSFRINSMELDYNNEDDNDDDDYTCCGESIRKKVTVSFEVPPSYYE--VSIIRCGVHVIMEE

TrEMBL top hitse value%identityAlignment
A0A1S3C131 TMV resistance protein N-like isoform X23.6e-1052.22Show/hide
Query:  MVLYPHRDFDQKIWDDILETSAEIDLWQPSFRINSMELDYNNEDDNDDDDYTCCGESIRKKVTVSFEVPPSY--YEVSIIRCGVHVIMEE
        +VLYPH +F     DDI+  S EI+L QPSF INS+  D NN + +DD      GESI +K TVSF V   +   E+SI  CGVHVIMEE
Subjt:  MVLYPHRDFDQKIWDDILETSAEIDLWQPSFRINSMELDYNNEDDNDDDDYTCCGESIRKKVTVSFEVPPSY--YEVSIIRCGVHVIMEE

A0A1S3CPD4 TMV resistance protein N-like2.8e-1057.14Show/hide
Query:  MVLYPHRDFDQKIWDDILETSAEIDLWQPSFRI-NSMELDYNNEDDNDDDDYTCCGESIRKKVTVSFEVPPSY--YEVSIIRCGVHVIMEE
        +VLYPH DF     DDI++ S EI+L QPSF I NSM  D NN  + DDD     GES   K TVSF V   Y   EVSI RCGVHVIMEE
Subjt:  MVLYPHRDFDQKIWDDILETSAEIDLWQPSFRI-NSMELDYNNEDDNDDDDYTCCGESIRKKVTVSFEVPPSY--YEVSIIRCGVHVIMEE

A0A1S4DZW3 TMV resistance protein N-like isoform X13.6e-1052.22Show/hide
Query:  MVLYPHRDFDQKIWDDILETSAEIDLWQPSFRINSMELDYNNEDDNDDDDYTCCGESIRKKVTVSFEVPPSY--YEVSIIRCGVHVIMEE
        +VLYPH +F     DDI+  S EI+L QPSF INS+  D NN + +DD      GESI +K TVSF V   +   E+SI  CGVHVIMEE
Subjt:  MVLYPHRDFDQKIWDDILETSAEIDLWQPSFRINSMELDYNNEDDNDDDDYTCCGESIRKKVTVSFEVPPSY--YEVSIIRCGVHVIMEE

D9I8I6 TIR-CC-NBS-AAA+ATPase class resistance protein8.1e-1049.44Show/hide
Query:  MVLYPHRDFDQKIWDDILETSAEIDLWQPSFRINSMELDYNNEDDNDDDDYTCCGESIRKKVTVSFEVPPSYYE--VSIIRCGVHVIME
        +VL PHRDF    WDD++E S E DL Q  F INSME+D N  +D     +   G SI K  TV FE  P   +  +SI  CGVHVIME
Subjt:  MVLYPHRDFDQKIWDDILETSAEIDLWQPSFRINSMELDYNNEDDNDDDDYTCCGESIRKKVTVSFEVPPSYYE--VSIIRCGVHVIME

E7CHD5 Putative TIR-CC-NBS-AAA+ATPase1.1e-0949.44Show/hide
Query:  MVLYPHRDFDQKIWDDILETSAEIDLWQPSFRINSMELDYNNEDDNDDDDYTCCGESIRKKVTVSFEVPPSYYE--VSIIRCGVHVIME
        +VL PHRDF    WDD +E S E DL Q  F INSME+D N  +D     +   G SI K  TV FE  P   +  +SI  CGVHVIME
Subjt:  MVLYPHRDFDQKIWDDILETSAEIDLWQPSFRINSMELDYNNEDDNDDDDYTCCGESIRKKVTVSFEVPPSYYE--VSIIRCGVHVIME

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTACTTTATCCTCATAGAGATTTTGACCAAAAAATTTGGGATGATATTCTGGAGACATCAGCGGAGATTGATCTATGGCAGCCAAGTTTTAGGATCAATTCAATGGA
ATTGGACTACAATAATGAAGATGATAATGATGATGATGATTATACTTGTTGTGGGGAAAGTATTCGGAAGAAAGTTACGGTTTCATTTGAGGTTCCTCCCAGTTATTATG
AAGTGAGTATAATTAGATGTGGTGTTCATGTTATCATGGAGGAATGA
mRNA sequenceShow/hide mRNA sequence
ATGGTACTTTATCCTCATAGAGATTTTGACCAAAAAATTTGGGATGATATTCTGGAGACATCAGCGGAGATTGATCTATGGCAGCCAAGTTTTAGGATCAATTCAATGGA
ATTGGACTACAATAATGAAGATGATAATGATGATGATGATTATACTTGTTGTGGGGAAAGTATTCGGAAGAAAGTTACGGTTTCATTTGAGGTTCCTCCCAGTTATTATG
AAGTGAGTATAATTAGATGTGGTGTTCATGTTATCATGGAGGAATGA
Protein sequenceShow/hide protein sequence
MVLYPHRDFDQKIWDDILETSAEIDLWQPSFRINSMELDYNNEDDNDDDDYTCCGESIRKKVTVSFEVPPSYYEVSIIRCGVHVIMEE