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HG10006430 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10006430
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionTMV resistance protein N-like
Genome locationChr07:18525772..18526017
RNA-Seq ExpressionHG10006430
SyntenyHG10006430
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008455000.2 PREDICTED: TMV resistance protein N-like isoform X2 [Cucumis melo]1.6e-0642.39Show/hide
Query:  MWLIVLYPYRDFHPNC--FMETSLEKDLNQSRFGTN---------YVDDHDWNYYLREIILTKFTVSFKVLPRAKNSVATIERCGVHVIMED
        MWL+VLYP+ +F  N    +  S E +L+Q  FG N          VDD     ++ E I  KFTVSF V  + K+S  +I+ CGVHVIME+
Subjt:  MWLIVLYPYRDFHPNC--FMETSLEKDLNQSRFGTN---------YVDDHDWNYYLREIILTKFTVSFKVLPRAKNSVATIERCGVHVIMED

XP_008465653.2 PREDICTED: TMV resistance protein N-like [Cucumis melo]2.7e-0642.39Show/hide
Query:  MWLIVLYPYRDFHPNC--FMETSLEKDLNQSRFG---------TNYVDDHDWNYYLREIILTKFTVSFKVLPRAKNSVATIERCGVHVIMED
        MWL+VLYP+ DF  N    ++ S E +L+Q  FG          N   D D   +  E   +KFTVSF V  + K+S  +I+RCGVHVIME+
Subjt:  MWLIVLYPYRDFHPNC--FMETSLEKDLNQSRFG---------TNYVDDHDWNYYLREIILTKFTVSFKVLPRAKNSVATIERCGVHVIMED

XP_016901532.1 PREDICTED: TMV resistance protein N-like isoform X1 [Cucumis melo]1.6e-0642.39Show/hide
Query:  MWLIVLYPYRDFHPNC--FMETSLEKDLNQSRFGTN---------YVDDHDWNYYLREIILTKFTVSFKVLPRAKNSVATIERCGVHVIMED
        MWL+VLYP+ +F  N    +  S E +L+Q  FG N          VDD     ++ E I  KFTVSF V  + K+S  +I+ CGVHVIME+
Subjt:  MWLIVLYPYRDFHPNC--FMETSLEKDLNQSRFGTN---------YVDDHDWNYYLREIILTKFTVSFKVLPRAKNSVATIERCGVHVIMED

XP_031737216.1 TMV resistance protein N isoform X3 [Cucumis sativus]4.6e-0643.48Show/hide
Query:  MWLIVLYPYRDFHPNC--FMETSLEK-DLNQSRFGTNYVD--------DHDWNYYLREIILTKFTVSFKVLPRAKNSVATIERCGVHVIMED
        MWL+VLYP+ DF  N    ++ S E  +L+Q  FG N +         D D   +  E I  KFTVSF V  + K+S  +I+RCGVHVIME+
Subjt:  MWLIVLYPYRDFHPNC--FMETSLEK-DLNQSRFGTNYVD--------DHDWNYYLREIILTKFTVSFKVLPRAKNSVATIERCGVHVIMED

XP_038876369.1 LOW QUALITY PROTEIN: TMV resistance protein N-like [Benincasa hispida]3.8e-0844.94Show/hide
Query:  MWLIVLYPYRDFHPNC--FMETSLEKDLNQSRFGTNYVD------DHDWNYYLREIILTKFTVSFKVLPRAKNSVATIERCGVHVIMED
        MWLIVL P+RDF+ +    ME S E D +   FG+N ++      + DWNY  R  I  KFTVSF++ P   +++ +I  CGVHVIME+
Subjt:  MWLIVLYPYRDFHPNC--FMETSLEKDLNQSRFGTNYVD------DHDWNYYLREIILTKFTVSFKVLPRAKNSVATIERCGVHVIMED

TrEMBL top hitse value%identityAlignment
A0A0A0LFP7 TIR domain-containing protein2.3e-0643.48Show/hide
Query:  MWLIVLYPYRDFHPNC--FMETSLEK-DLNQSRFGTNYVD--------DHDWNYYLREIILTKFTVSFKVLPRAKNSVATIERCGVHVIMED
        MWL+VLYP+ DF  N    ++ S E  +L+Q  FG N +         D D   +  E I  KFTVSF V  + K+S  +I+RCGVHVIME+
Subjt:  MWLIVLYPYRDFHPNC--FMETSLEK-DLNQSRFGTNYVD--------DHDWNYYLREIILTKFTVSFKVLPRAKNSVATIERCGVHVIMED

A0A1S3BZE0 TMV resistance protein N-like isoform X25.5e-0539.33Show/hide
Query:  WLIVLYPYRDFHPNC--FMETSLEKDLNQSRFGT-------NYVDDHDWNYYLREIILTKFTVSFKVLPRAKNSVATIERCGVHVIMED
        W IVL P+RDF+ +    ME S E D++Q  FG        N + D +WN  +   I   FTV F   P   ++  +I+ CGVHVIME+
Subjt:  WLIVLYPYRDFHPNC--FMETSLEKDLNQSRFGT-------NYVDDHDWNYYLREIILTKFTVSFKVLPRAKNSVATIERCGVHVIMED

A0A1S3C131 TMV resistance protein N-like isoform X27.7e-0742.39Show/hide
Query:  MWLIVLYPYRDFHPNC--FMETSLEKDLNQSRFGTN---------YVDDHDWNYYLREIILTKFTVSFKVLPRAKNSVATIERCGVHVIMED
        MWL+VLYP+ +F  N    +  S E +L+Q  FG N          VDD     ++ E I  KFTVSF V  + K+S  +I+ CGVHVIME+
Subjt:  MWLIVLYPYRDFHPNC--FMETSLEKDLNQSRFGTN---------YVDDHDWNYYLREIILTKFTVSFKVLPRAKNSVATIERCGVHVIMED

A0A1S3CPD4 TMV resistance protein N-like1.3e-0642.39Show/hide
Query:  MWLIVLYPYRDFHPNC--FMETSLEKDLNQSRFG---------TNYVDDHDWNYYLREIILTKFTVSFKVLPRAKNSVATIERCGVHVIMED
        MWL+VLYP+ DF  N    ++ S E +L+Q  FG          N   D D   +  E   +KFTVSF V  + K+S  +I+RCGVHVIME+
Subjt:  MWLIVLYPYRDFHPNC--FMETSLEKDLNQSRFG---------TNYVDDHDWNYYLREIILTKFTVSFKVLPRAKNSVATIERCGVHVIMED

A0A1S4DZW3 TMV resistance protein N-like isoform X17.7e-0742.39Show/hide
Query:  MWLIVLYPYRDFHPNC--FMETSLEKDLNQSRFGTN---------YVDDHDWNYYLREIILTKFTVSFKVLPRAKNSVATIERCGVHVIMED
        MWL+VLYP+ +F  N    +  S E +L+Q  FG N          VDD     ++ E I  KFTVSF V  + K+S  +I+ CGVHVIME+
Subjt:  MWLIVLYPYRDFHPNC--FMETSLEKDLNQSRFGTN---------YVDDHDWNYYLREIILTKFTVSFKVLPRAKNSVATIERCGVHVIMED

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGGTTGATAGTACTTTATCCATATAGAGATTTCCACCCAAATTGTTTTATGGAGACATCATTGGAGAAAGATCTAAATCAGTCACGTTTTGGTACTAATTATGTAGA
TGATCATGATTGGAATTATTATCTTAGGGAGATTATTTTGACGAAATTTACGGTGTCGTTTAAGGTTCTTCCCAGGGCTAAAAACAGTGTAGCAACTATTGAAAGGTGTG
GTGTTCATGTAATCATGGAGGATTGA
mRNA sequenceShow/hide mRNA sequence
ATGTGGTTGATAGTACTTTATCCATATAGAGATTTCCACCCAAATTGTTTTATGGAGACATCATTGGAGAAAGATCTAAATCAGTCACGTTTTGGTACTAATTATGTAGA
TGATCATGATTGGAATTATTATCTTAGGGAGATTATTTTGACGAAATTTACGGTGTCGTTTAAGGTTCTTCCCAGGGCTAAAAACAGTGTAGCAACTATTGAAAGGTGTG
GTGTTCATGTAATCATGGAGGATTGA
Protein sequenceShow/hide protein sequence
MWLIVLYPYRDFHPNCFMETSLEKDLNQSRFGTNYVDDHDWNYYLREIILTKFTVSFKVLPRAKNSVATIERCGVHVIMED