; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10006439 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10006439
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionCyclin
Genome locationChr07:18588689..18589818
RNA-Seq ExpressionHG10006439
SyntenyHG10006439
Gene Ontology termsGO:0000079 - regulation of cyclin-dependent protein serine/threonine kinase activity (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0019901 - protein kinase binding (molecular function)
InterPro domainsIPR012389 - Cyclin P/U
IPR013922 - Cyclin PHO80-like
IPR036915 - Cyclin-like superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0047963.1 cyclin-P3-1 [Cucumis melo var. makuwa]7.3e-7192.36Show/hide
Query:  MSIGQYIDRILKYTCCGTSCLVVAYIYIERYLQKMDAYLTNLNIHRLLITSIMVAAKFIDAGCYNNTFYAKVGGVSTKEMNSLEIEFLFNLDFRLHVTAD
        M IGQYIDRILKYTCCGT+CL+VAYIYIERYLQKMD YLT+LN+HRLLITSIMVAAKF DAGCYNNTFYAKVGGVSTKEMNSLEIEFLFNLDFRLHVTAD
Subjt:  MSIGQYIDRILKYTCCGTSCLVVAYIYIERYLQKMDAYLTNLNIHRLLITSIMVAAKFIDAGCYNNTFYAKVGGVSTKEMNSLEIEFLFNLDFRLHVTAD

Query:  VFSTHCLQLQKEVLGVENQADRRAGNKARTKCLPQITGYTCSAI
        VFSTHCLQLQKEVLG ENQ +RR GNKARTKCLPQITGYTCSAI
Subjt:  VFSTHCLQLQKEVLGVENQADRRAGNKARTKCLPQITGYTCSAI

XP_004139180.1 cyclin-P3-1 isoform X1 [Cucumis sativus]3.3e-7193.06Show/hide
Query:  MSIGQYIDRILKYTCCGTSCLVVAYIYIERYLQKMDAYLTNLNIHRLLITSIMVAAKFIDAGCYNNTFYAKVGGVSTKEMNSLEIEFLFNLDFRLHVTAD
        M IGQYIDRILKYTCCGT+CLVVAYIYIERYLQK D YLT+LN+HRLLITSIMVAAKFIDAGCYNNTFYAKVGGVSTKEMNSLEIEFLFNLDFRLHVTAD
Subjt:  MSIGQYIDRILKYTCCGTSCLVVAYIYIERYLQKMDAYLTNLNIHRLLITSIMVAAKFIDAGCYNNTFYAKVGGVSTKEMNSLEIEFLFNLDFRLHVTAD

Query:  VFSTHCLQLQKEVLGVENQADRRAGNKARTKCLPQITGYTCSAI
        VFSTHCLQLQKEVLG ENQ +RR GNKARTKCLPQITGYTCSAI
Subjt:  VFSTHCLQLQKEVLGVENQADRRAGNKARTKCLPQITGYTCSAI

XP_008454704.1 PREDICTED: cyclin-P3-1 [Cucumis melo]7.3e-7192.36Show/hide
Query:  MSIGQYIDRILKYTCCGTSCLVVAYIYIERYLQKMDAYLTNLNIHRLLITSIMVAAKFIDAGCYNNTFYAKVGGVSTKEMNSLEIEFLFNLDFRLHVTAD
        M IGQYIDRILKYTCCGT+CL+VAYIYIERYLQKMD YLT+LN+HRLLITSIMVAAKF DAGCYNNTFYAKVGGVSTKEMNSLEIEFLFNLDFRLHVTAD
Subjt:  MSIGQYIDRILKYTCCGTSCLVVAYIYIERYLQKMDAYLTNLNIHRLLITSIMVAAKFIDAGCYNNTFYAKVGGVSTKEMNSLEIEFLFNLDFRLHVTAD

Query:  VFSTHCLQLQKEVLGVENQADRRAGNKARTKCLPQITGYTCSAI
        VFSTHCLQLQKEVLG ENQ +RR GNKARTKCLPQITGYTCSAI
Subjt:  VFSTHCLQLQKEVLGVENQADRRAGNKARTKCLPQITGYTCSAI

XP_022946012.1 cyclin-P3-1-like [Cucurbita moschata]1.6e-6285.42Show/hide
Query:  MSIGQYIDRILKYTCCGTSCLVVAYIYIERYLQKMDAYLTNLNIHRLLITSIMVAAKFIDAGCYNNTFYAKVGGVSTKEMNSLEIEFLFNLDFRLHVTAD
        MS GQYIDRI KYTCCGT CLVVAYIYIERYLQKM AYLT+LN+HRLLITSIMVAAKF DAGCYNN FYAKVGGVSTKEMNS+EIE LFNLDFRLHVTAD
Subjt:  MSIGQYIDRILKYTCCGTSCLVVAYIYIERYLQKMDAYLTNLNIHRLLITSIMVAAKFIDAGCYNNTFYAKVGGVSTKEMNSLEIEFLFNLDFRLHVTAD

Query:  VFSTHCLQLQKEVLGVENQADRRAGNKARTKCLPQITGYTCSAI
        VF  HCLQLQKE LG ENQ DRR GNK RT+CLPQI  YTC AI
Subjt:  VFSTHCLQLQKEVLGVENQADRRAGNKARTKCLPQITGYTCSAI

XP_038886918.1 cyclin-P3-1 [Benincasa hispida]2.5e-7193.75Show/hide
Query:  MSIGQYIDRILKYTCCGTSCLVVAYIYIERYLQKMDAYLTNLNIHRLLITSIMVAAKFIDAGCYNNTFYAKVGGVSTKEMNSLEIEFLFNLDFRLHVTAD
        M IGQYIDRILKYTCCGT CLVVAYIYIERYLQKMDAYLTNLNIHRLLITSIMVAAKFIDAGCYNNTFYAKVGGVSTKEMNSLEIEFLFNLDFRLHVTAD
Subjt:  MSIGQYIDRILKYTCCGTSCLVVAYIYIERYLQKMDAYLTNLNIHRLLITSIMVAAKFIDAGCYNNTFYAKVGGVSTKEMNSLEIEFLFNLDFRLHVTAD

Query:  VFSTHCLQLQKEVLGVENQADRRAGNKARTKCLPQITGYTCSAI
        +FS HCLQLQKE LG ENQ D RAGNK RTKCLPQITGYTCSAI
Subjt:  VFSTHCLQLQKEVLGVENQADRRAGNKARTKCLPQITGYTCSAI

TrEMBL top hitse value%identityAlignment
A0A0A0LJL5 Cyclin1.6e-7193.06Show/hide
Query:  MSIGQYIDRILKYTCCGTSCLVVAYIYIERYLQKMDAYLTNLNIHRLLITSIMVAAKFIDAGCYNNTFYAKVGGVSTKEMNSLEIEFLFNLDFRLHVTAD
        M IGQYIDRILKYTCCGT+CLVVAYIYIERYLQK D YLT+LN+HRLLITSIMVAAKFIDAGCYNNTFYAKVGGVSTKEMNSLEIEFLFNLDFRLHVTAD
Subjt:  MSIGQYIDRILKYTCCGTSCLVVAYIYIERYLQKMDAYLTNLNIHRLLITSIMVAAKFIDAGCYNNTFYAKVGGVSTKEMNSLEIEFLFNLDFRLHVTAD

Query:  VFSTHCLQLQKEVLGVENQADRRAGNKARTKCLPQITGYTCSAI
        VFSTHCLQLQKEVLG ENQ +RR GNKARTKCLPQITGYTCSAI
Subjt:  VFSTHCLQLQKEVLGVENQADRRAGNKARTKCLPQITGYTCSAI

A0A1S3C004 cyclin-P3-13.6e-7192.36Show/hide
Query:  MSIGQYIDRILKYTCCGTSCLVVAYIYIERYLQKMDAYLTNLNIHRLLITSIMVAAKFIDAGCYNNTFYAKVGGVSTKEMNSLEIEFLFNLDFRLHVTAD
        M IGQYIDRILKYTCCGT+CL+VAYIYIERYLQKMD YLT+LN+HRLLITSIMVAAKF DAGCYNNTFYAKVGGVSTKEMNSLEIEFLFNLDFRLHVTAD
Subjt:  MSIGQYIDRILKYTCCGTSCLVVAYIYIERYLQKMDAYLTNLNIHRLLITSIMVAAKFIDAGCYNNTFYAKVGGVSTKEMNSLEIEFLFNLDFRLHVTAD

Query:  VFSTHCLQLQKEVLGVENQADRRAGNKARTKCLPQITGYTCSAI
        VFSTHCLQLQKEVLG ENQ +RR GNKARTKCLPQITGYTCSAI
Subjt:  VFSTHCLQLQKEVLGVENQADRRAGNKARTKCLPQITGYTCSAI

A0A5A7TWJ7 Cyclin3.6e-7192.36Show/hide
Query:  MSIGQYIDRILKYTCCGTSCLVVAYIYIERYLQKMDAYLTNLNIHRLLITSIMVAAKFIDAGCYNNTFYAKVGGVSTKEMNSLEIEFLFNLDFRLHVTAD
        M IGQYIDRILKYTCCGT+CL+VAYIYIERYLQKMD YLT+LN+HRLLITSIMVAAKF DAGCYNNTFYAKVGGVSTKEMNSLEIEFLFNLDFRLHVTAD
Subjt:  MSIGQYIDRILKYTCCGTSCLVVAYIYIERYLQKMDAYLTNLNIHRLLITSIMVAAKFIDAGCYNNTFYAKVGGVSTKEMNSLEIEFLFNLDFRLHVTAD

Query:  VFSTHCLQLQKEVLGVENQADRRAGNKARTKCLPQITGYTCSAI
        VFSTHCLQLQKEVLG ENQ +RR GNKARTKCLPQITGYTCSAI
Subjt:  VFSTHCLQLQKEVLGVENQADRRAGNKARTKCLPQITGYTCSAI

A0A6J1G2L7 Cyclin7.9e-6385.42Show/hide
Query:  MSIGQYIDRILKYTCCGTSCLVVAYIYIERYLQKMDAYLTNLNIHRLLITSIMVAAKFIDAGCYNNTFYAKVGGVSTKEMNSLEIEFLFNLDFRLHVTAD
        MS GQYIDRI KYTCCGT CLVVAYIYIERYLQKM AYLT+LN+HRLLITSIMVAAKF DAGCYNN FYAKVGGVSTKEMNS+EIE LFNLDFRLHVTAD
Subjt:  MSIGQYIDRILKYTCCGTSCLVVAYIYIERYLQKMDAYLTNLNIHRLLITSIMVAAKFIDAGCYNNTFYAKVGGVSTKEMNSLEIEFLFNLDFRLHVTAD

Query:  VFSTHCLQLQKEVLGVENQADRRAGNKARTKCLPQITGYTCSAI
        VF  HCLQLQKE LG ENQ DRR GNK RT+CLPQI  YTC AI
Subjt:  VFSTHCLQLQKEVLGVENQADRRAGNKARTKCLPQITGYTCSAI

A6YTD1 Cyclin-dependent kinase3.6e-7192.36Show/hide
Query:  MSIGQYIDRILKYTCCGTSCLVVAYIYIERYLQKMDAYLTNLNIHRLLITSIMVAAKFIDAGCYNNTFYAKVGGVSTKEMNSLEIEFLFNLDFRLHVTAD
        M IGQYIDRILKYTCCGT+CL+VAYIYIERYLQKMD YLT+LN+HRLLITSIMVAAKF DAGCYNNTFYAKVGGVSTKEMNSLEIEFLFNLDFRLHVTAD
Subjt:  MSIGQYIDRILKYTCCGTSCLVVAYIYIERYLQKMDAYLTNLNIHRLLITSIMVAAKFIDAGCYNNTFYAKVGGVSTKEMNSLEIEFLFNLDFRLHVTAD

Query:  VFSTHCLQLQKEVLGVENQADRRAGNKARTKCLPQITGYTCSAI
        VFSTHCLQLQKEVLG ENQ +RR GNKARTKCLPQITGYTCSAI
Subjt:  VFSTHCLQLQKEVLGVENQADRRAGNKARTKCLPQITGYTCSAI

SwissProt top hitse value%identityAlignment
O80513 Cyclin-U4-17.2e-2952.63Show/hide
Query:  MSIGQYIDRILKYTCCGTSCLVVAYIYIERYLQKMDAY-LTNLNIHRLLITSIMVAAKFIDAGCYNNTFYAKVGGVSTKEMNSLEIEFLFNLDFRLHVTA
        ++I  Y++RI KY  C  SC VVAY+Y++R+  +  +  + + N+HRLLITS+MVAAKF+D   YNN +YAKVGG+STKEMN LE++FLF L F L+VT 
Subjt:  MSIGQYIDRILKYTCCGTSCLVVAYIYIERYLQKMDAY-LTNLNIHRLLITSIMVAAKFIDAGCYNNTFYAKVGGVSTKEMNSLEIEFLFNLDFRLHVTA

Query:  DVFSTHCLQLQKEV
        + F+ +   LQKE+
Subjt:  DVFSTHCLQLQKEV

Q75HV0 Cyclin-P3-17.5e-3446.15Show/hide
Query:  MSIGQYIDRILKYTCCGTSCLVVAYIYIERYLQKMDAYLTNLNIHRLLITSIMVAAKFIDAGCYNNTFYAKVGGVSTKEMNSLEIEFLFNLDFRLHVTAD
        +SI  Y +RI KY+ C  SC V+A IY+ERYLQ+   Y+T+L++HRLLITS++VAAKF D   +NN FYA+VGG+ST EMN LE++ LFNLDFRL V  +
Subjt:  MSIGQYIDRILKYTCCGTSCLVVAYIYIERYLQKMDAYLTNLNIHRLLITSIMVAAKFIDAGCYNNTFYAKVGGVSTKEMNSLEIEFLFNLDFRLHVTAD

Query:  VFSTHCLQLQKEVL------------GVENQADRRAGNKARTKCLPQITGYTCSAI
         F ++CLQL+KE +            GV +  D    +     C  ++  Y+  A+
Subjt:  VFSTHCLQLQKEVL------------GVENQADRRAGNKARTKCLPQITGYTCSAI

Q7XC35 Cyclin-P4-14.7e-2845.19Show/hide
Query:  MSIGQYIDRILKYTCCGTSCLVVAYIYIERYLQKMDAY-LTNLNIHRLLITSIMVAAKFIDAGCYNNTFYAKVGGVSTKEMNSLEIEFLFNLDFRLHVTA
        +SIG Y++RI ++  C  SC VVAYIY++R+L++  A  + + N+HRLLITS++ A KF+D  CYNN ++A+VGG+S  EMN LE++FLF + F L+VT 
Subjt:  MSIGQYIDRILKYTCCGTSCLVVAYIYIERYLQKMDAY-LTNLNIHRLLITSIMVAAKFIDAGCYNNTFYAKVGGVSTKEMNSLEIEFLFNLDFRLHVTA

Query:  DVFSTHCLQLQKEVLGVENQADRRAGNKARTKCLP
          F+++C  LQ E+  +E      A +  R  C P
Subjt:  DVFSTHCLQLQKEVLGVENQADRRAGNKARTKCLP

Q8LB60 Cyclin-U3-19.1e-3254.46Show/hide
Query:  MSIGQYIDRILKYTCCGTSCLVVAYIYIERYLQKMDAYLTNLNIHRLLITSIMVAAKFIDAGCYNNTFYAKVGGVSTKEMNSLEIEFLFNLDFRLHVTAD
        +SI  Y+DRI KY+CC  SC V+A+IYI+ +L K  A L  LN+HRL+IT++M+AAK  D   +NN +YA+VGGV+T+E+N LE+E LF LDF+L V   
Subjt:  MSIGQYIDRILKYTCCGTSCLVVAYIYIERYLQKMDAYLTNLNIHRLLITSIMVAAKFIDAGCYNNTFYAKVGGVSTKEMNSLEIEFLFNLDFRLHVTAD

Query:  VFSTHCLQLQKE
         F THC QL+K+
Subjt:  VFSTHCLQLQKE

Q9LY16 Cyclin-U4-26.5e-3050.43Show/hide
Query:  MSIGQYIDRILKYTCCGTSCLVVAYIYIERYLQKMDAY-LTNLNIHRLLITSIMVAAKFIDAGCYNNTFYAKVGGVSTKEMNSLEIEFLFNLDFRLHVTA
        +SI  Y++RI KY  C  SC +VAYIY++R++QK     + + N+HRL+ITS++V+AKF+D  CYNN FYAKVGG++T+EMN LE++FLF + F+L+VT 
Subjt:  MSIGQYIDRILKYTCCGTSCLVVAYIYIERYLQKMDAY-LTNLNIHRLLITSIMVAAKFIDAGCYNNTFYAKVGGVSTKEMNSLEIEFLFNLDFRLHVTA

Query:  DVFSTHCLQLQKEVL
          ++ +C  LQ+E++
Subjt:  DVFSTHCLQLQKEVL

Arabidopsis top hitse value%identityAlignment
AT2G44740.1 cyclin p4;15.1e-3052.63Show/hide
Query:  MSIGQYIDRILKYTCCGTSCLVVAYIYIERYLQKMDAY-LTNLNIHRLLITSIMVAAKFIDAGCYNNTFYAKVGGVSTKEMNSLEIEFLFNLDFRLHVTA
        ++I  Y++RI KY  C  SC VVAY+Y++R+  +  +  + + N+HRLLITS+MVAAKF+D   YNN +YAKVGG+STKEMN LE++FLF L F L+VT 
Subjt:  MSIGQYIDRILKYTCCGTSCLVVAYIYIERYLQKMDAY-LTNLNIHRLLITSIMVAAKFIDAGCYNNTFYAKVGGVSTKEMNSLEIEFLFNLDFRLHVTA

Query:  DVFSTHCLQLQKEV
        + F+ +   LQKE+
Subjt:  DVFSTHCLQLQKEV

AT3G05327.1 Cyclin family protein1.1e-3248.91Show/hide
Query:  MSIGQYIDRILKYTCCGTSCLVVAYIYIERYLQKMDA-----YLTNLNIHRLLITSIMVAAKFIDAGCYNNTFYAKVGGVSTKEMNSLEIEFLFNLDFRL
        +SI +Y +RI +Y  C   C V A+ YI RYLQ+ +A      LT+LN+HRLLITS++VAAKF++  CYNN +YAK+GGVST+EMN LE  FL ++DFRL
Subjt:  MSIGQYIDRILKYTCCGTSCLVVAYIYIERYLQKMDA-----YLTNLNIHRLLITSIMVAAKFIDAGCYNNTFYAKVGGVSTKEMNSLEIEFLFNLDFRL

Query:  HVTADVFSTHCLQLQKEVLGVENQADRRAGNKARTKC
        ++T + F  HCL LQKE +  +++  R    +    C
Subjt:  HVTADVFSTHCLQLQKEVLGVENQADRRAGNKARTKC

AT3G63120.1 cyclin p1;16.5e-3354.46Show/hide
Query:  MSIGQYIDRILKYTCCGTSCLVVAYIYIERYLQKMDAYLTNLNIHRLLITSIMVAAKFIDAGCYNNTFYAKVGGVSTKEMNSLEIEFLFNLDFRLHVTAD
        +SI  Y+DRI KY+CC  SC V+A+IYI+ +L K  A L  LN+HRL+IT++M+AAK  D   +NN +YA+VGGV+T+E+N LE+E LF LDF+L V   
Subjt:  MSIGQYIDRILKYTCCGTSCLVVAYIYIERYLQKMDAYLTNLNIHRLLITSIMVAAKFIDAGCYNNTFYAKVGGVSTKEMNSLEIEFLFNLDFRLHVTAD

Query:  VFSTHCLQLQKE
         F THC QL+K+
Subjt:  VFSTHCLQLQKE

AT5G07450.1 cyclin p4;34.6e-3150.43Show/hide
Query:  MSIGQYIDRILKYTCCGTSCLVVAYIYIERYLQKMDAY-LTNLNIHRLLITSIMVAAKFIDAGCYNNTFYAKVGGVSTKEMNSLEIEFLFNLDFRLHVTA
        +SI  Y++RI KY  C  SC +VAYIY++R++QK     + + N+HRL+ITS++V+AKF+D  CYNN FYAKVGG++T+EMN LE++FLF + F+L+VT 
Subjt:  MSIGQYIDRILKYTCCGTSCLVVAYIYIERYLQKMDAY-LTNLNIHRLLITSIMVAAKFIDAGCYNNTFYAKVGGVSTKEMNSLEIEFLFNLDFRLHVTA

Query:  DVFSTHCLQLQKEVL
          ++ +C  LQ+E++
Subjt:  DVFSTHCLQLQKEVL

AT5G61650.1 CYCLIN P4;21.6e-2848.25Show/hide
Query:  MSIGQYIDRILKYTCCGTSCLVVAYIYIERYLQKMDAY-LTNLNIHRLLITSIMVAAKFIDAGCYNNTFYAKVGGVSTKEMNSLEIEFLFNLDFRLHVTA
        +SI  Y++RI +Y  C  SC +VAYIY++R+++K     + + N+HRL+ITS++V+AKF+D   YNN +YAKVGG+S +EMN LE++FLF + F L+VT 
Subjt:  MSIGQYIDRILKYTCCGTSCLVVAYIYIERYLQKMDAY-LTNLNIHRLLITSIMVAAKFIDAGCYNNTFYAKVGGVSTKEMNSLEIEFLFNLDFRLHVTA

Query:  DVFSTHCLQLQKEV
          F+ +C  LQ+E+
Subjt:  DVFSTHCLQLQKEV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGCATTGGACAATATATCGATCGCATCTTGAAGTACACATGTTGTGGCACTTCCTGCTTAGTTGTTGCCTACATATACATTGAAAGGTATCTTCAAAAGATGGATGC
TTACCTAACTAATTTGAACATCCACCGCCTTCTGATCACCAGCATCATGGTTGCAGCGAAGTTTATCGATGCCGGATGCTATAACAATACTTTTTATGCCAAAGTTGGAG
GAGTGAGCACAAAAGAAATGAACAGCTTGGAGATAGAATTTCTGTTCAATTTGGACTTCAGACTTCATGTCACTGCTGATGTTTTCAGTACTCACTGTTTGCAGCTCCAA
AAGGAAGTTCTTGGGGTGGAGAATCAAGCCGATCGTCGAGCCGGTAACAAAGCTCGAACTAAATGTTTACCTCAAATTACAGGCTACACTTGCAGTGCCATTTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGCATTGGACAATATATCGATCGCATCTTGAAGTACACATGTTGTGGCACTTCCTGCTTAGTTGTTGCCTACATATACATTGAAAGGTATCTTCAAAAGATGGATGC
TTACCTAACTAATTTGAACATCCACCGCCTTCTGATCACCAGCATCATGGTTGCAGCGAAGTTTATCGATGCCGGATGCTATAACAATACTTTTTATGCCAAAGTTGGAG
GAGTGAGCACAAAAGAAATGAACAGCTTGGAGATAGAATTTCTGTTCAATTTGGACTTCAGACTTCATGTCACTGCTGATGTTTTCAGTACTCACTGTTTGCAGCTCCAA
AAGGAAGTTCTTGGGGTGGAGAATCAAGCCGATCGTCGAGCCGGTAACAAAGCTCGAACTAAATGTTTACCTCAAATTACAGGCTACACTTGCAGTGCCATTTGA
Protein sequenceShow/hide protein sequence
MSIGQYIDRILKYTCCGTSCLVVAYIYIERYLQKMDAYLTNLNIHRLLITSIMVAAKFIDAGCYNNTFYAKVGGVSTKEMNSLEIEFLFNLDFRLHVTADVFSTHCLQLQ
KEVLGVENQADRRAGNKARTKCLPQITGYTCSAI