CuGenDBv2

Gene ID	HG10006452
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	NAD(P)H-quinone oxidoreductase subunit H, chloroplastic
Genome location	Chr07:18720825..18721205
RNA-Seq Expression	HG10006452
Synteny	HG10006452
Gene Ontology terms	GO:0019684 - photosynthesis, light reaction (biological process) GO:0005886 - plasma membrane (cellular component) GO:0009535 - chloroplast thylakoid membrane (cellular component) GO:0048038 - quinone binding (molecular function) GO:0050136 - NADH dehydrogenase (quinone) activity (molecular function) GO:0051287 - NAD binding (molecular function)
InterPro domains	IPR001135 - NADH-quinone oxidoreductase, subunit D IPR022885 - NAD(P)H-quinone oxidoreductase subunit D/H IPR029014 - [NiFe]-hydrogenase, large subunit

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

YP_009317442.1 NADH dehydrogenase subunit 7 [Coccinia grandis]

2.8e-66

100

Show/hide

Query:  MTESVKIIQQALEGIPGGPYENLEIRSFDRGRSPEWNDFDYRFISKKPSPTFELAKQELYVRVEAPKGELGIFLIGDQGGFPWRWKIRPPGFINLQILPQ
        MTESVKIIQQALEGIPGGPYENLEIRSFDRGRSPEWNDFDYRFISKKPSPTFELAKQELYVRVEAPKGELGIFLIGDQGGFPWRWKIRPPGFINLQILPQ
Subjt:  MTESVKIIQQALEGIPGGPYENLEIRSFDRGRSPEWNDFDYRFISKKPSPTFELAKQELYVRVEAPKGELGIFLIGDQGGFPWRWKIRPPGFINLQILPQ

Query:  LVKRMKLADIMTILGSIDIIMGEVDR
        LVKRMKLADIMTILGSIDIIMGEVDR
Subjt:  LVKRMKLADIMTILGSIDIIMGEVDR

YP_009326046.1 NADH dehydrogenase subunit 7 [Citrullus lanatus]

2.8e-66

100

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Query:  MTESVKIIQQALEGIPGGPYENLEIRSFDRGRSPEWNDFDYRFISKKPSPTFELAKQELYVRVEAPKGELGIFLIGDQGGFPWRWKIRPPGFINLQILPQ
        MTESVKIIQQALEGIPGGPYENLEIRSFDRGRSPEWNDFDYRFISKKPSPTFELAKQELYVRVEAPKGELGIFLIGDQGGFPWRWKIRPPGFINLQILPQ
Subjt:  MTESVKIIQQALEGIPGGPYENLEIRSFDRGRSPEWNDFDYRFISKKPSPTFELAKQELYVRVEAPKGELGIFLIGDQGGFPWRWKIRPPGFINLQILPQ

Query:  LVKRMKLADIMTILGSIDIIMGEVDR
        LVKRMKLADIMTILGSIDIIMGEVDR
Subjt:  LVKRMKLADIMTILGSIDIIMGEVDR

YP_009420851.1 NADH dehydrogenase subunit 7 [Citrullus colocynthis]

2.8e-66

100

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Query:  MTESVKIIQQALEGIPGGPYENLEIRSFDRGRSPEWNDFDYRFISKKPSPTFELAKQELYVRVEAPKGELGIFLIGDQGGFPWRWKIRPPGFINLQILPQ
        MTESVKIIQQALEGIPGGPYENLEIRSFDRGRSPEWNDFDYRFISKKPSPTFELAKQELYVRVEAPKGELGIFLIGDQGGFPWRWKIRPPGFINLQILPQ
Subjt:  MTESVKIIQQALEGIPGGPYENLEIRSFDRGRSPEWNDFDYRFISKKPSPTFELAKQELYVRVEAPKGELGIFLIGDQGGFPWRWKIRPPGFINLQILPQ

Query:  LVKRMKLADIMTILGSIDIIMGEVDR
        LVKRMKLADIMTILGSIDIIMGEVDR
Subjt:  LVKRMKLADIMTILGSIDIIMGEVDR

YP_009753137.1 NADH dehydrogenase subunit H [Corallocarpus boehmii]

2.8e-66

100

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Query:  MTESVKIIQQALEGIPGGPYENLEIRSFDRGRSPEWNDFDYRFISKKPSPTFELAKQELYVRVEAPKGELGIFLIGDQGGFPWRWKIRPPGFINLQILPQ
        MTESVKIIQQALEGIPGGPYENLEIRSFDRGRSPEWNDFDYRFISKKPSPTFELAKQELYVRVEAPKGELGIFLIGDQGGFPWRWKIRPPGFINLQILPQ
Subjt:  MTESVKIIQQALEGIPGGPYENLEIRSFDRGRSPEWNDFDYRFISKKPSPTFELAKQELYVRVEAPKGELGIFLIGDQGGFPWRWKIRPPGFINLQILPQ

Query:  LVKRMKLADIMTILGSIDIIMGEVDR
        LVKRMKLADIMTILGSIDIIMGEVDR
Subjt:  LVKRMKLADIMTILGSIDIIMGEVDR

YP_010131142.1 NADH-plastoquinone oxidoreductase subunit 7 [Benincasa hispida]

2.8e-66

100

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Query:  MTESVKIIQQALEGIPGGPYENLEIRSFDRGRSPEWNDFDYRFISKKPSPTFELAKQELYVRVEAPKGELGIFLIGDQGGFPWRWKIRPPGFINLQILPQ
        MTESVKIIQQALEGIPGGPYENLEIRSFDRGRSPEWNDFDYRFISKKPSPTFELAKQELYVRVEAPKGELGIFLIGDQGGFPWRWKIRPPGFINLQILPQ
Subjt:  MTESVKIIQQALEGIPGGPYENLEIRSFDRGRSPEWNDFDYRFISKKPSPTFELAKQELYVRVEAPKGELGIFLIGDQGGFPWRWKIRPPGFINLQILPQ

Query:  LVKRMKLADIMTILGSIDIIMGEVDR
        LVKRMKLADIMTILGSIDIIMGEVDR
Subjt:  LVKRMKLADIMTILGSIDIIMGEVDR

TrEMBL top hits

e value

%identity

Alignment

A0A1P8LE44 NADH-quinone oxidoreductase subunit D

1.4e-66

100

Show/hide

Query:  MTESVKIIQQALEGIPGGPYENLEIRSFDRGRSPEWNDFDYRFISKKPSPTFELAKQELYVRVEAPKGELGIFLIGDQGGFPWRWKIRPPGFINLQILPQ
        MTESVKIIQQALEGIPGGPYENLEIRSFDRGRSPEWNDFDYRFISKKPSPTFELAKQELYVRVEAPKGELGIFLIGDQGGFPWRWKIRPPGFINLQILPQ
Subjt:  MTESVKIIQQALEGIPGGPYENLEIRSFDRGRSPEWNDFDYRFISKKPSPTFELAKQELYVRVEAPKGELGIFLIGDQGGFPWRWKIRPPGFINLQILPQ

Query:  LVKRMKLADIMTILGSIDIIMGEVDR
        LVKRMKLADIMTILGSIDIIMGEVDR
Subjt:  LVKRMKLADIMTILGSIDIIMGEVDR

A0A1P8LEK8 NADH-quinone oxidoreductase subunit D

1.4e-66

100

Show/hide

Query:  MTESVKIIQQALEGIPGGPYENLEIRSFDRGRSPEWNDFDYRFISKKPSPTFELAKQELYVRVEAPKGELGIFLIGDQGGFPWRWKIRPPGFINLQILPQ
        MTESVKIIQQALEGIPGGPYENLEIRSFDRGRSPEWNDFDYRFISKKPSPTFELAKQELYVRVEAPKGELGIFLIGDQGGFPWRWKIRPPGFINLQILPQ
Subjt:  MTESVKIIQQALEGIPGGPYENLEIRSFDRGRSPEWNDFDYRFISKKPSPTFELAKQELYVRVEAPKGELGIFLIGDQGGFPWRWKIRPPGFINLQILPQ

Query:  LVKRMKLADIMTILGSIDIIMGEVDR
        LVKRMKLADIMTILGSIDIIMGEVDR
Subjt:  LVKRMKLADIMTILGSIDIIMGEVDR

A0A2Z2CGA8 NAD(P)H-quinone oxidoreductase subunit H, chloroplastic

1.4e-66

100

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Query:  MTESVKIIQQALEGIPGGPYENLEIRSFDRGRSPEWNDFDYRFISKKPSPTFELAKQELYVRVEAPKGELGIFLIGDQGGFPWRWKIRPPGFINLQILPQ
        MTESVKIIQQALEGIPGGPYENLEIRSFDRGRSPEWNDFDYRFISKKPSPTFELAKQELYVRVEAPKGELGIFLIGDQGGFPWRWKIRPPGFINLQILPQ
Subjt:  MTESVKIIQQALEGIPGGPYENLEIRSFDRGRSPEWNDFDYRFISKKPSPTFELAKQELYVRVEAPKGELGIFLIGDQGGFPWRWKIRPPGFINLQILPQ

Query:  LVKRMKLADIMTILGSIDIIMGEVDR
        LVKRMKLADIMTILGSIDIIMGEVDR
Subjt:  LVKRMKLADIMTILGSIDIIMGEVDR

A0A6H0EXE7 NAD(P)H-quinone oxidoreductase subunit H, chloroplastic

1.4e-66

100

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Query:  MTESVKIIQQALEGIPGGPYENLEIRSFDRGRSPEWNDFDYRFISKKPSPTFELAKQELYVRVEAPKGELGIFLIGDQGGFPWRWKIRPPGFINLQILPQ
        MTESVKIIQQALEGIPGGPYENLEIRSFDRGRSPEWNDFDYRFISKKPSPTFELAKQELYVRVEAPKGELGIFLIGDQGGFPWRWKIRPPGFINLQILPQ
Subjt:  MTESVKIIQQALEGIPGGPYENLEIRSFDRGRSPEWNDFDYRFISKKPSPTFELAKQELYVRVEAPKGELGIFLIGDQGGFPWRWKIRPPGFINLQILPQ

Query:  LVKRMKLADIMTILGSIDIIMGEVDR
        LVKRMKLADIMTILGSIDIIMGEVDR
Subjt:  LVKRMKLADIMTILGSIDIIMGEVDR

A0A7T3QNM6 NADH-plastoquinone oxidoreductase subunit 7

1.4e-66

100

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Query:  MTESVKIIQQALEGIPGGPYENLEIRSFDRGRSPEWNDFDYRFISKKPSPTFELAKQELYVRVEAPKGELGIFLIGDQGGFPWRWKIRPPGFINLQILPQ
        MTESVKIIQQALEGIPGGPYENLEIRSFDRGRSPEWNDFDYRFISKKPSPTFELAKQELYVRVEAPKGELGIFLIGDQGGFPWRWKIRPPGFINLQILPQ
Subjt:  MTESVKIIQQALEGIPGGPYENLEIRSFDRGRSPEWNDFDYRFISKKPSPTFELAKQELYVRVEAPKGELGIFLIGDQGGFPWRWKIRPPGFINLQILPQ

Query:  LVKRMKLADIMTILGSIDIIMGEVDR
        LVKRMKLADIMTILGSIDIIMGEVDR
Subjt:  LVKRMKLADIMTILGSIDIIMGEVDR

SwissProt top hits

e value

%identity

Alignment

A4QLG5 NAD(P)H-quinone oxidoreductase subunit H, chloroplastic

1.9e-65

93.65

Show/hide

Query:  MTESVKIIQQALEGIPGGPYENLEIRSFDRGRSPEWNDFDYRFISKKPSPTFELAKQELYVRVEAPKGELGIFLIGDQGGFPWRWKIRPPGFINLQILPQ
        MTES+KIIQQALEG+PGGPYENLE RSFDR R+PEWNDFDYRFISKKPSPTFEL+KQELYVRVEAPKGELGIFLIGDQ GFPWRWKIRPPGFINLQILP+
Subjt:  MTESVKIIQQALEGIPGGPYENLEIRSFDRGRSPEWNDFDYRFISKKPSPTFELAKQELYVRVEAPKGELGIFLIGDQGGFPWRWKIRPPGFINLQILPQ

Query:  LVKRMKLADIMTILGSIDIIMGEVDR
        LVKRMKLADIMTILGSIDIIMGEVDR
Subjt:  LVKRMKLADIMTILGSIDIIMGEVDR

B1A990 NAD(P)H-quinone oxidoreductase subunit H, chloroplastic

1.9e-65

94.44

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Query:  MTESVKIIQQALEGIPGGPYENLEIRSFDRGRSPEWNDFDYRFISKKPSPTFELAKQELYVRVEAPKGELGIFLIGDQGGFPWRWKIRPPGFINLQILPQ
        MTES+KIIQQALEGIPGGPYENLEIR FDR + PEWNDFDYRFISKKPSPTFEL KQELYVRVEAPKGELGIFLIGDQ GFPWRWKIRPPGFINLQILPQ
Subjt:  MTESVKIIQQALEGIPGGPYENLEIRSFDRGRSPEWNDFDYRFISKKPSPTFELAKQELYVRVEAPKGELGIFLIGDQGGFPWRWKIRPPGFINLQILPQ

Query:  LVKRMKLADIMTILGSIDIIMGEVDR
        LVKRMKLADIMTILGSIDIIMGEVDR
Subjt:  LVKRMKLADIMTILGSIDIIMGEVDR

Q09WW2 NAD(P)H-quinone oxidoreductase subunit H, chloroplastic

8.4e-66

95.24

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Query:  MTESVKIIQQALEGIPGGPYENLEIRSFDRGRSPEWNDFDYRFISKKPSPTFELAKQELYVRVEAPKGELGIFLIGDQGGFPWRWKIRPPGFINLQILPQ
        MTES+KIIQQALEGIPGGPYENLEIR FDR R+PEWNDFDYRFISKKPSPTFEL KQELYVRVEAPKGELGIFLIGDQ GFPWRWKIRPPGFINLQILPQ
Subjt:  MTESVKIIQQALEGIPGGPYENLEIRSFDRGRSPEWNDFDYRFISKKPSPTFELAKQELYVRVEAPKGELGIFLIGDQGGFPWRWKIRPPGFINLQILPQ

Query:  LVKRMKLADIMTILGSIDIIMGEVDR
        LVKRMKLADIMTILGSIDIIMGEVDR
Subjt:  LVKRMKLADIMTILGSIDIIMGEVDR

Q4VZL2 NAD(P)H-quinone oxidoreductase subunit H, chloroplastic

1.8e-68

99.21

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Query:  MTESVKIIQQALEGIPGGPYENLEIRSFDRGRSPEWNDFDYRFISKKPSPTFELAKQELYVRVEAPKGELGIFLIGDQGGFPWRWKIRPPGFINLQILPQ
        MTESVKIIQQALEGIPGGPYENLEIRSFDR RSPEWNDFDYRFISKKPSPTFELAKQELYVRVEAPKGELGIFLIGDQGGFPWRWKIRPPGFINLQILPQ
Subjt:  MTESVKIIQQALEGIPGGPYENLEIRSFDRGRSPEWNDFDYRFISKKPSPTFELAKQELYVRVEAPKGELGIFLIGDQGGFPWRWKIRPPGFINLQILPQ

Query:  LVKRMKLADIMTILGSIDIIMGEVDR
        LVKRMKLADIMTILGSIDIIMGEVDR
Subjt:  LVKRMKLADIMTILGSIDIIMGEVDR

Q68RV0 NAD(P)H-quinone oxidoreductase subunit H, chloroplastic

9.3e-65

93.65

Show/hide

Query:  MTESVKIIQQALEGIPGGPYENLEIRSFDRGRSPEWNDFDYRFISKKPSPTFELAKQELYVRVEAPKGELGIFLIGDQGGFPWRWKIRPPGFINLQILPQ
        MTES+KIIQQALEGIPGGPYENLEIR FD+ R PEWNDFDYRFISKKPSPTFEL+KQELYVRVEAPKGELGIFLIGD+G FPWRWKIRPPGFINLQILPQ
Subjt:  MTESVKIIQQALEGIPGGPYENLEIRSFDRGRSPEWNDFDYRFISKKPSPTFELAKQELYVRVEAPKGELGIFLIGDQGGFPWRWKIRPPGFINLQILPQ

Query:  LVKRMKLADIMTILGSIDIIMGEVDR
        LVKRMKLADIMTILGSIDIIMGEVDR
Subjt:  LVKRMKLADIMTILGSIDIIMGEVDR

Arabidopsis top hits

e value

%identity

Alignment

ATCG01110.1 NAD(P)H dehydrogenase subunit H

1.1e-65

92.06

Show/hide

Query:  MTESVKIIQQALEGIPGGPYENLEIRSFDRGRSPEWNDFDYRFISKKPSPTFELAKQELYVRVEAPKGELGIFLIGDQGGFPWRWKIRPPGFINLQILPQ
        MTES+KIIQQALEG+PGGPYENLE R FDR R+PEWNDF+YRFISKKPSPTFEL+KQELYVRVEAPKGELGIFLIGDQ GFPWRWKIRPPGFINLQILP+
Subjt:  MTESVKIIQQALEGIPGGPYENLEIRSFDRGRSPEWNDFDYRFISKKPSPTFELAKQELYVRVEAPKGELGIFLIGDQGGFPWRWKIRPPGFINLQILPQ

Query:  LVKRMKLADIMTILGSIDIIMGEVDR
        LVKRMKLADIMTILGSIDIIMGEVDR
Subjt:  LVKRMKLADIMTILGSIDIIMGEVDR

ATMG00510.1 NADH dehydrogenase subunit 7

2.2e-13

36.09

Show/hide

Query:  MTESVKIIQQALEGIPGGPYENLEIRSFDRGRSPEWNDFDYRFISKKPSPTFELAKQ-------ELYVRVEAPKGELGIFLIGDQGGFPWRWKIRPPGFI
        M +S++II Q L  +P G      I++ DR   P  +    +   +     FEL  +         Y  VEAPKGE G+FL+ +    P+R KIR PG  
Subjt:  MTESVKIIQQALEGIPGGPYENLEIRSFDRGRSPEWNDFDYRFISKKPSPTFELAKQ-------ELYVRVEAPKGELGIFLIGDQGGFPWRWKIRPPGFI

Query:  NLQILPQLVKRMKLADIMTILGSIDIIMGEVDR
        + Q L  + K    AD++TI+G+ DI+ GEVDR
Subjt:  NLQILPQLVKRMKLADIMTILGSIDIIMGEVDR

Sequences

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CDS sequence

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ATGACGGAATCCGTAAAAATTATTCAACAAGCTTTGGAAGGAATTCCAGGGGGACCTTATGAAAATTTAGAAATACGATCTTTTGATCGAGGAAGGTCTCCGGAATGGAA
CGACTTTGACTATCGATTCATTAGTAAAAAACCTTCGCCAACTTTTGAATTGGCGAAACAAGAACTTTATGTGAGAGTCGAAGCCCCCAAAGGAGAATTGGGCATTTTTT
TGATAGGGGATCAGGGTGGTTTTCCTTGGAGATGGAAAATTCGCCCGCCGGGTTTTATCAATTTGCAAATTCTTCCTCAGTTAGTTAAAAGAATGAAATTGGCTGATATT
ATGACAATACTAGGTAGCATAGATATCATTATGGGAGAAGTTGATCGTTAA

mRNA sequence

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Protein sequence

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MTESVKIIQQALEGIPGGPYENLEIRSFDRGRSPEWNDFDYRFISKKPSPTFELAKQELYVRVEAPKGELGIFLIGDQGGFPWRWKIRPPGFINLQILPQLVKRMKLADI
MTILGSIDIIMGEVDR

HG10006452 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome