| GenBank top hits | e value | %identity | Alignment |
|---|
| AHM88912.1 RNA polymerase beta [Lagenaria siceraria] | 1.6e-66 | 100 | Show/hide |
Query: MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFLIRGLIRQHFAS
MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFLIRGLIRQHFAS
Subjt: MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFLIRGLIRQHFAS
Query: NIGVAKSKIREKEPIVWEILQEVMQGHPV
NIGVAKSKIREKEPIVWEILQEVMQGHPV
Subjt: NIGVAKSKIREKEPIVWEILQEVMQGHPV
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| AHM88970.1 RNA polymerase beta [Lagenaria siceraria] | 1.6e-66 | 100 | Show/hide |
Query: MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFLIRGLIRQHFAS
MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFLIRGLIRQHFAS
Subjt: MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFLIRGLIRQHFAS
Query: NIGVAKSKIREKEPIVWEILQEVMQGHPV
NIGVAKSKIREKEPIVWEILQEVMQGHPV
Subjt: NIGVAKSKIREKEPIVWEILQEVMQGHPV
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| ASY96794.1 RNA polymerase beta' subunit [Cucumis melo var. momordica] | 1.6e-66 | 100 | Show/hide |
Query: MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFLIRGLIRQHFAS
MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFLIRGLIRQHFAS
Subjt: MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFLIRGLIRQHFAS
Query: NIGVAKSKIREKEPIVWEILQEVMQGHPV
NIGVAKSKIREKEPIVWEILQEVMQGHPV
Subjt: NIGVAKSKIREKEPIVWEILQEVMQGHPV
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| YP_009560826.1 RpoC1 [Trichosanthes kirilowii] | 1.6e-66 | 100 | Show/hide |
Query: MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFLIRGLIRQHFAS
MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFLIRGLIRQHFAS
Subjt: MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFLIRGLIRQHFAS
Query: NIGVAKSKIREKEPIVWEILQEVMQGHPV
NIGVAKSKIREKEPIVWEILQEVMQGHPV
Subjt: NIGVAKSKIREKEPIVWEILQEVMQGHPV
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| YP_247590.2 RNA polymerase beta' subunit [Cucumis sativus] | 1.6e-66 | 100 | Show/hide |
Query: MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFLIRGLIRQHFAS
MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFLIRGLIRQHFAS
Subjt: MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFLIRGLIRQHFAS
Query: NIGVAKSKIREKEPIVWEILQEVMQGHPV
NIGVAKSKIREKEPIVWEILQEVMQGHPV
Subjt: NIGVAKSKIREKEPIVWEILQEVMQGHPV
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A1P8LE65 DNA-directed RNA polymerase subunit gamma | 7.6e-67 | 100 | Show/hide |
Query: MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFLIRGLIRQHFAS
MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFLIRGLIRQHFAS
Subjt: MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFLIRGLIRQHFAS
Query: NIGVAKSKIREKEPIVWEILQEVMQGHPV
NIGVAKSKIREKEPIVWEILQEVMQGHPV
Subjt: NIGVAKSKIREKEPIVWEILQEVMQGHPV
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| A0A1X9Q1T5 DNA-directed RNA polymerase subunit beta' | 7.6e-67 | 100 | Show/hide |
Query: MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFLIRGLIRQHFAS
MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFLIRGLIRQHFAS
Subjt: MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFLIRGLIRQHFAS
Query: NIGVAKSKIREKEPIVWEILQEVMQGHPV
NIGVAKSKIREKEPIVWEILQEVMQGHPV
Subjt: NIGVAKSKIREKEPIVWEILQEVMQGHPV
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| A0A218KG20 DNA-directed RNA polymerase subunit beta' | 7.6e-67 | 100 | Show/hide |
Query: MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFLIRGLIRQHFAS
MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFLIRGLIRQHFAS
Subjt: MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFLIRGLIRQHFAS
Query: NIGVAKSKIREKEPIVWEILQEVMQGHPV
NIGVAKSKIREKEPIVWEILQEVMQGHPV
Subjt: NIGVAKSKIREKEPIVWEILQEVMQGHPV
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| A0A249RZJ2 DNA-directed RNA polymerase subunit beta' | 7.6e-67 | 100 | Show/hide |
Query: MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFLIRGLIRQHFAS
MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFLIRGLIRQHFAS
Subjt: MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFLIRGLIRQHFAS
Query: NIGVAKSKIREKEPIVWEILQEVMQGHPV
NIGVAKSKIREKEPIVWEILQEVMQGHPV
Subjt: NIGVAKSKIREKEPIVWEILQEVMQGHPV
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| A0A6M3S6B8 DNA-directed RNA polymerase subunit beta' | 7.6e-67 | 100 | Show/hide |
Query: MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFLIRGLIRQHFAS
MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFLIRGLIRQHFAS
Subjt: MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFLIRGLIRQHFAS
Query: NIGVAKSKIREKEPIVWEILQEVMQGHPV
NIGVAKSKIREKEPIVWEILQEVMQGHPV
Subjt: NIGVAKSKIREKEPIVWEILQEVMQGHPV
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| Q3C1G8 DNA-directed RNA polymerase subunit beta' | 2.3e-68 | 98.45 | Show/hide |
Query: MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFLIRGLIRQHFAS
MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTF+IRGLIRQH AS
Subjt: MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFLIRGLIRQHFAS
Query: NIGVAKSKIREKEPIVWEILQEVMQGHPV
NIGVAKSKIREKEPIVWEILQEVMQGHPV
Subjt: NIGVAKSKIREKEPIVWEILQEVMQGHPV
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| Q4VZP2 DNA-directed RNA polymerase subunit beta' | 2.1e-69 | 100 | Show/hide |
Query: MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFLIRGLIRQHFAS
MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFLIRGLIRQHFAS
Subjt: MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFLIRGLIRQHFAS
Query: NIGVAKSKIREKEPIVWEILQEVMQGHPV
NIGVAKSKIREKEPIVWEILQEVMQGHPV
Subjt: NIGVAKSKIREKEPIVWEILQEVMQGHPV
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| Q68S15 DNA-directed RNA polymerase subunit beta' | 2.3e-68 | 98.45 | Show/hide |
Query: MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFLIRGLIRQHFAS
MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTF+IRGLIRQH AS
Subjt: MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFLIRGLIRQHFAS
Query: NIGVAKSKIREKEPIVWEILQEVMQGHPV
NIGVAKSKIREKEPIVWEILQEVMQGHPV
Subjt: NIGVAKSKIREKEPIVWEILQEVMQGHPV
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| Q8HVY4 DNA-directed RNA polymerase subunit beta' | 1.0e-68 | 97.67 | Show/hide |
Query: MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFLIRGLIRQHFAS
MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSD+IEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFLIRGLIR+HFAS
Subjt: MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFLIRGLIRQHFAS
Query: NIGVAKSKIREKEPIVWEILQEVMQGHPV
NIG+AKSKIREKEPIVWEILQEVMQGHPV
Subjt: NIGVAKSKIREKEPIVWEILQEVMQGHPV
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| Q8S8Y0 DNA-directed RNA polymerase subunit beta' | 2.3e-68 | 98.45 | Show/hide |
Query: MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFLIRGLIRQHFAS
MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTF+IRGLIRQH AS
Subjt: MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFLIRGLIRQHFAS
Query: NIGVAKSKIREKEPIVWEILQEVMQGHPV
NIGVAKSKIREKEPIVWEILQEVMQGHPV
Subjt: NIGVAKSKIREKEPIVWEILQEVMQGHPV
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| Arabidopsis top hits | e value | %identity | Alignment |
|---|
| AT3G57660.1 nuclear RNA polymerase A1 | 1.6e-05 | 34.18 | Show/hide |
Query: VQEAVDTLLDNGIRG-QPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIEL
+QE+V+ L D+ Q RD ++E KEG FR+ ++GKRV+++ RSVI P ++++ G+P A++L
Subjt: VQEAVDTLLDNGIRG-QPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIEL
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| AT4G35800.1 RNA polymerase II large subunit | 1.4e-09 | 38.27 | Show/hide |
Query: KLVQEAVDTLLDNGIRGQP-MRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIEL
+L+Q + T DN + GQP + KS ++ KEGR R L+GKRVD+S R+VI P++++ G+P IA+ L
Subjt: KLVQEAVDTLLDNGIRGQP-MRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIEL
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| AT5G60040.1 nuclear RNA polymerase C1 | 8.2e-05 | 48.72 | Show/hide |
Query: IEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLP
++GK GRFR L GKRV+++GR+VI P+L + G+P
Subjt: IEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLP
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| AT5G60040.2 nuclear RNA polymerase C1 | 8.2e-05 | 48.72 | Show/hide |
Query: IEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLP
++GK GRFR L GKRV+++GR+VI P+L + G+P
Subjt: IEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLP
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| ATCG00180.1 DNA-directed RNA polymerase family protein | 1.4e-68 | 96.9 | Show/hide |
Query: MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFLIRGLIRQHFAS
MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTF+IRGLIRQH AS
Subjt: MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFLIRGLIRQHFAS
Query: NIGVAKSKIREKEPIVWEILQEVMQGHPV
NIGVAKS+IREK+PIVWEILQEVMQGHPV
Subjt: NIGVAKSKIREKEPIVWEILQEVMQGHPV
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