; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10006471 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10006471
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionTMV resistance protein N-like
Genome locationChr07:18844589..18845330
RNA-Seq ExpressionHG10006471
SyntenyHG10006471
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0063682.1 TMV resistance protein N-like isoform X1 [Cucumis melo var. makuwa]1.6e-1342.28Show/hide
Query:  IPEWFSHQTTTSSISVSLQHYPQKTAVLAACVVFKVDGDSCEAKASIKYDVFIDGESSKYFEITDWPSSKSEYMWLITTPITFSSLD----GICEVSCKV
        IPEWFS++TT++ ++ S +HYP     LAACV FKV+GDS +  A I   +FI  +    F     P SKSEYMWL+TT + + S++        V  +V
Subjt:  IPEWFSHQTTTSSISVSLQHYPQKTAVLAACVVFKVDGDSCEAKASIKYDVFIDGESSKYFEITDWPSSKSEYMWLITTPITFSSLD----GICEVSCKV

Query:  YEVCNNASVTIRSLGVHIDVTEE
        +E  +  + TI   GVH  VTEE
Subjt:  YEVCNNASVTIRSLGVHIDVTEE

TYK18345.1 TMV resistance protein N-like isoform X1 [Cucumis melo var. makuwa]1.6e-1342.28Show/hide
Query:  IPEWFSHQTTTSSISVSLQHYPQKTAVLAACVVFKVDGDSCEAKASIKYDVFIDGESSKYFEITDWPSSKSEYMWLITTPITFSSLD----GICEVSCKV
        IPEWFS++TT++ ++ S +HYP     LAACV FKV+GDS +  A I   +FI  +    F     P SKSEYMWL+TT + + S++        V  +V
Subjt:  IPEWFSHQTTTSSISVSLQHYPQKTAVLAACVVFKVDGDSCEAKASIKYDVFIDGESSKYFEITDWPSSKSEYMWLITTPITFSSLD----GICEVSCKV

Query:  YEVCNNASVTIRSLGVHIDVTEE
        +E  +  + TI   GVH  VTEE
Subjt:  YEVCNNASVTIRSLGVHIDVTEE

XP_008455151.1 PREDICTED: TMV resistance protein N-like isoform X1 [Cucumis melo]1.6e-1342.28Show/hide
Query:  IPEWFSHQTTTSSISVSLQHYPQKTAVLAACVVFKVDGDSCEAKASIKYDVFIDGESSKYFEITDWPSSKSEYMWLITTPITFSSLD----GICEVSCKV
        IPEWFS++TT++ ++ S +HYP     LAACV FKV+GDS +  A I   +FI  +    F     P SKSEYMWL+TT + + S++        V  +V
Subjt:  IPEWFSHQTTTSSISVSLQHYPQKTAVLAACVVFKVDGDSCEAKASIKYDVFIDGESSKYFEITDWPSSKSEYMWLITTPITFSSLD----GICEVSCKV

Query:  YEVCNNASVTIRSLGVHIDVTEE
        +E  +  + TI   GVH  VTEE
Subjt:  YEVCNNASVTIRSLGVHIDVTEE

XP_031741270.1 TMV resistance protein N-like [Cucumis sativus]1.4e-4677.34Show/hide
Query:  MNSMIPEWFSHQ-TTTSSISVSLQHYPQKTAVLAACVVFKVDGDSCEAKASIKYDVFIDGESSKYFEITDWPSSKSEYMWLITTPITFSSLDGICEVSCK
        MN MIPEWF+HQ TTTSSISVSLQH PQKT VLAACV+FKVDGDSCEAKASIKYD+FIDGES KYFEIT  PSSKSEYMWLITTP+TFSS+   C+VSC 
Subjt:  MNSMIPEWFSHQ-TTTSSISVSLQHYPQKTAVLAACVVFKVDGDSCEAKASIKYDVFIDGESSKYFEITDWPSSKSEYMWLITTPITFSSLDGICEVSCK

Query:  VYEVCNNASVTIRSLGVHIDVTEEQRQS
        + +  +NA  TIRSLGVHIDV  +QRQ+
Subjt:  VYEVCNNASVTIRSLGVHIDVTEEQRQS

XP_038877835.1 LOW QUALITY PROTEIN: TMV resistance protein N-like [Benincasa hispida]4.2e-1444.72Show/hide
Query:  IPEWFSHQTTTSSISVSLQHYPQKTAVLAACVVFKVDGDSCEAKASIKYDVFIDGESSKYFEITDWPSSKSEYMWLITTPITFSSLD----GICEVSCKV
        IPEWF ++TTT+ IS S +HYP     LAACV FKV+GDS +  A +   +FI       F     P SKSEYMWL+TT + + S++        V  +V
Subjt:  IPEWFSHQTTTSSISVSLQHYPQKTAVLAACVVFKVDGDSCEAKASIKYDVFIDGESSKYFEITDWPSSKSEYMWLITTPITFSSLD----GICEVSCKV

Query:  YEVCNNASVTIRSLGVHIDVTEE
        +E     +VTIRS G+H  VTEE
Subjt:  YEVCNNASVTIRSLGVHIDVTEE

TrEMBL top hitse value%identityAlignment
A0A0A0KM44 Uncharacterized protein7.0e-4777.34Show/hide
Query:  MNSMIPEWFSHQ-TTTSSISVSLQHYPQKTAVLAACVVFKVDGDSCEAKASIKYDVFIDGESSKYFEITDWPSSKSEYMWLITTPITFSSLDGICEVSCK
        MN MIPEWF+HQ TTTSSISVSLQH PQKT VLAACV+FKVDGDSCEAKASIKYD+FIDGES KYFEIT  PSSKSEYMWLITTP+TFSS+   C+VSC 
Subjt:  MNSMIPEWFSHQ-TTTSSISVSLQHYPQKTAVLAACVVFKVDGDSCEAKASIKYDVFIDGESSKYFEITDWPSSKSEYMWLITTPITFSSLDGICEVSCK

Query:  VYEVCNNASVTIRSLGVHIDVTEEQRQS
        + +  +NA  TIRSLGVHIDV  +QRQ+
Subjt:  VYEVCNNASVTIRSLGVHIDVTEEQRQS

A0A1S3C088 TMV resistance protein N-like isoform X17.8e-1442.28Show/hide
Query:  IPEWFSHQTTTSSISVSLQHYPQKTAVLAACVVFKVDGDSCEAKASIKYDVFIDGESSKYFEITDWPSSKSEYMWLITTPITFSSLD----GICEVSCKV
        IPEWFS++TT++ ++ S +HYP     LAACV FKV+GDS +  A I   +FI  +    F     P SKSEYMWL+TT + + S++        V  +V
Subjt:  IPEWFSHQTTTSSISVSLQHYPQKTAVLAACVVFKVDGDSCEAKASIKYDVFIDGESSKYFEITDWPSSKSEYMWLITTPITFSSLD----GICEVSCKV

Query:  YEVCNNASVTIRSLGVHIDVTEE
        +E  +  + TI   GVH  VTEE
Subjt:  YEVCNNASVTIRSLGVHIDVTEE

A0A1S3C093 TMV resistance protein N-like isoform X27.8e-1442.28Show/hide
Query:  IPEWFSHQTTTSSISVSLQHYPQKTAVLAACVVFKVDGDSCEAKASIKYDVFIDGESSKYFEITDWPSSKSEYMWLITTPITFSSLD----GICEVSCKV
        IPEWFS++TT++ ++ S +HYP     LAACV FKV+GDS +  A I   +FI  +    F     P SKSEYMWL+TT + + S++        V  +V
Subjt:  IPEWFSHQTTTSSISVSLQHYPQKTAVLAACVVFKVDGDSCEAKASIKYDVFIDGESSKYFEITDWPSSKSEYMWLITTPITFSSLD----GICEVSCKV

Query:  YEVCNNASVTIRSLGVHIDVTEE
        +E  +  + TI   GVH  VTEE
Subjt:  YEVCNNASVTIRSLGVHIDVTEE

A0A5A7V617 TMV resistance protein N-like isoform X17.8e-1442.28Show/hide
Query:  IPEWFSHQTTTSSISVSLQHYPQKTAVLAACVVFKVDGDSCEAKASIKYDVFIDGESSKYFEITDWPSSKSEYMWLITTPITFSSLD----GICEVSCKV
        IPEWFS++TT++ ++ S +HYP     LAACV FKV+GDS +  A I   +FI  +    F     P SKSEYMWL+TT + + S++        V  +V
Subjt:  IPEWFSHQTTTSSISVSLQHYPQKTAVLAACVVFKVDGDSCEAKASIKYDVFIDGESSKYFEITDWPSSKSEYMWLITTPITFSSLD----GICEVSCKV

Query:  YEVCNNASVTIRSLGVHIDVTEE
        +E  +  + TI   GVH  VTEE
Subjt:  YEVCNNASVTIRSLGVHIDVTEE

A0A5D3D473 TMV resistance protein N-like isoform X17.8e-1442.28Show/hide
Query:  IPEWFSHQTTTSSISVSLQHYPQKTAVLAACVVFKVDGDSCEAKASIKYDVFIDGESSKYFEITDWPSSKSEYMWLITTPITFSSLD----GICEVSCKV
        IPEWFS++TT++ ++ S +HYP     LAACV FKV+GDS +  A I   +FI  +    F     P SKSEYMWL+TT + + S++        V  +V
Subjt:  IPEWFSHQTTTSSISVSLQHYPQKTAVLAACVVFKVDGDSCEAKASIKYDVFIDGESSKYFEITDWPSSKSEYMWLITTPITFSSLD----GICEVSCKV

Query:  YEVCNNASVTIRSLGVHIDVTEE
        +E  +  + TI   GVH  VTEE
Subjt:  YEVCNNASVTIRSLGVHIDVTEE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAACAGTATGATCCCAGAATGGTTCAGCCATCAAACTACGACAAGTTCAATAAGCGTTAGCCTTCAACACTATCCACAAAAGACAGCAGTTTTGGCTGCCTGTGTTGT
TTTCAAAGTAGATGGAGATTCATGTGAAGCCAAGGCCTCTATTAAATATGATGTGTTCATTGATGGTGAATCGTCGAAATATTTCGAGATCACCGACTGGCCCTCGTCGA
AATCAGAATATATGTGGTTAATAACAACCCCTATAACATTTAGCTCCTTGGACGGGATTTGTGAAGTATCCTGTAAGGTTTACGAGGTTTGTAATAATGCTAGCGTAACC
ATAAGAAGTCTTGGCGTCCATATCGACGTAACAGAGGAGCAAAGGCAAAGTTGCGGCGCCGGAAATAGAAGGCCAAATGCAGTCAGGCCCCGCGGCATCGTCGCAAGTCT
CCCTCGAACGCACGGGCTGCAACAACTTGGTCCAGCCCATAGAACCGCGCCGCCATAA
mRNA sequenceShow/hide mRNA sequence
ATGAACAGTATGATCCCAGAATGGTTCAGCCATCAAACTACGACAAGTTCAATAAGCGTTAGCCTTCAACACTATCCACAAAAGACAGCAGTTTTGGCTGCCTGTGTTGT
TTTCAAAGTAGATGGAGATTCATGTGAAGCCAAGGCCTCTATTAAATATGATGTGTTCATTGATGGTGAATCGTCGAAATATTTCGAGATCACCGACTGGCCCTCGTCGA
AATCAGAATATATGTGGTTAATAACAACCCCTATAACATTTAGCTCCTTGGACGGGATTTGTGAAGTATCCTGTAAGGTTTACGAGGTTTGTAATAATGCTAGCGTAACC
ATAAGAAGTCTTGGCGTCCATATCGACGTAACAGAGGAGCAAAGGCAAAGTTGCGGCGCCGGAAATAGAAGGCCAAATGCAGTCAGGCCCCGCGGCATCGTCGCAAGTCT
CCCTCGAACGCACGGGCTGCAACAACTTGGTCCAGCCCATAGAACCGCGCCGCCATAA
Protein sequenceShow/hide protein sequence
MNSMIPEWFSHQTTTSSISVSLQHYPQKTAVLAACVVFKVDGDSCEAKASIKYDVFIDGESSKYFEITDWPSSKSEYMWLITTPITFSSLDGICEVSCKVYEVCNNASVT
IRSLGVHIDVTEEQRQSCGAGNRRPNAVRPRGIVASLPRTHGLQQLGPAHRTAPP