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HG10006529 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10006529
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionPathogenesis-related protein PR-4-like
Genome locationChr07:19574989..19575303
RNA-Seq ExpressionHG10006529
SyntenyHG10006529
Gene Ontology termsGO:0042742 - defense response to bacterium (biological process)
GO:0050832 - defense response to fungus (biological process)
GO:0090501 - RNA phosphodiester bond hydrolysis (biological process)
GO:0004540 - ribonuclease activity (molecular function)
InterPro domainsIPR001153 - Barwin domain
IPR036908 - RlpA-like domain superfamily
IPR044301 - Pathogenesis-related protein-4


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0063601.1 pathogenesis-related protein PR-4-like [Cucumis melo var. makuwa]5.3e-3981.11Show/hide
Query:  MEKKSLVILLLGLWASLLGGGKGQSASNVWATYNLYNPQTIDWNYLIASVFCATWDANKPLNWRSHYGWTAFCGPVGPIGRDSCGRCLKV
        M++ SL++  L LWASLLG GKGQSASNV ATYN YNPQTI WNY+ ASVFCATWDANKPLNWR HYGWTAFCGPVGP GRDSCGRCL+V
Subjt:  MEKKSLVILLLGLWASLLGGGKGQSASNVWATYNLYNPQTIDWNYLIASVFCATWDANKPLNWRSHYGWTAFCGPVGPIGRDSCGRCLKV

XP_004139241.1 pathogenesis-related protein PR-4 [Cucumis sativus]3.8e-3779.12Show/hide
Query:  MEKKSLVILL-LGLWASLLGGGKGQSASNVWATYNLYNPQTIDWNYLIASVFCATWDANKPLNWRSHYGWTAFCGPVGPIGRDSCGRCLKV
        M++ SL+I+  L LWASLLG GKGQSASNV ATYN YNPQTI WNY+ ASVFC+TWDANKPLNWR HYGWTAFCGPVGP GR+SCGRCL+V
Subjt:  MEKKSLVILL-LGLWASLLGGGKGQSASNVWATYNLYNPQTIDWNYLIASVFCATWDANKPLNWRSHYGWTAFCGPVGPIGRDSCGRCLKV

XP_022143159.1 pathogenesis-related protein PR-4-like [Momordica charantia]2.9e-2971.11Show/hide
Query:  MEKKSLVILLLGLWASLLGGGKGQSASNVWATYNLYNPQTIDWNYLIASVFCATWDANKPLNWRSHYGWTAFCGPVGPIGRDSCGRCLKV
        ME+  LV+L+LGL   LLG    QSA+NV ATY+LYNPQ I+W+YL ASVFCATWDANKPL WR  YGWTAFCGPVGP G+ SCGRCL+V
Subjt:  MEKKSLVILLLGLWASLLGGGKGQSASNVWATYNLYNPQTIDWNYLIASVFCATWDANKPLNWRSHYGWTAFCGPVGPIGRDSCGRCLKV

XP_031129054.1 pathogenesis-related protein PR-4-like [Ipomoea triloba]1.1e-2867.78Show/hide
Query:  MEKKSLVILLLGLWASLLGGGKGQSASNVWATYNLYNPQTIDWNYLIASVFCATWDANKPLNWRSHYGWTAFCGPVGPIGRDSCGRCLKV
        ME+     LLL +  +++GG   QSA+NV ATYN+YNPQ I+W+Y  ASVFCATWD NKPL WR  YGWTAFCGPVGP GRDSCGRCLKV
Subjt:  MEKKSLVILLLGLWASLLGGGKGQSASNVWATYNLYNPQTIDWNYLIASVFCATWDANKPLNWRSHYGWTAFCGPVGPIGRDSCGRCLKV

XP_038891021.1 pathogenesis-related protein PR-4-like [Benincasa hispida]2.4e-3981.11Show/hide
Query:  MEKKSLVILLLGLWASLLGGGKGQSASNVWATYNLYNPQTIDWNYLIASVFCATWDANKPLNWRSHYGWTAFCGPVGPIGRDSCGRCLKV
        M++ SL++L+L LWASL+GGG GQSASNV ATYNLYNPQTI+WNYL ASV+CATWDANKPLNWRSHYGWTAFCGP GP GRDSCG CL+V
Subjt:  MEKKSLVILLLGLWASLLGGGKGQSASNVWATYNLYNPQTIDWNYLIASVFCATWDANKPLNWRSHYGWTAFCGPVGPIGRDSCGRCLKV

TrEMBL top hitse value%identityAlignment
A0A0A0LJA9 Barwin domain-containing protein1.9e-3779.12Show/hide
Query:  MEKKSLVILL-LGLWASLLGGGKGQSASNVWATYNLYNPQTIDWNYLIASVFCATWDANKPLNWRSHYGWTAFCGPVGPIGRDSCGRCLKV
        M++ SL+I+  L LWASLLG GKGQSASNV ATYN YNPQTI WNY+ ASVFC+TWDANKPLNWR HYGWTAFCGPVGP GR+SCGRCL+V
Subjt:  MEKKSLVILL-LGLWASLLGGGKGQSASNVWATYNLYNPQTIDWNYLIASVFCATWDANKPLNWRSHYGWTAFCGPVGPIGRDSCGRCLKV

A0A1S3C3H6 pathogenesis-related protein PR-4-like5.4e-2968.89Show/hide
Query:  MEKKSLVILLLGLWASLLGGGKGQSASNVWATYNLYNPQTIDWNYLIASVFCATWDANKPLNWRSHYGWTAFCGPVGPIGRDSCGRCLKV
        MEK S++++L+ L   +L     QSA+NV ATY+LYNPQ I+W+YL ASVFCATWDANKPL WR  YGWTAFCGPVGP GRDSCGRCL+V
Subjt:  MEKKSLVILLLGLWASLLGGGKGQSASNVWATYNLYNPQTIDWNYLIASVFCATWDANKPLNWRSHYGWTAFCGPVGPIGRDSCGRCLKV

A0A5A7VCZ9 Pathogenesis-related protein PR-4-like2.6e-3981.11Show/hide
Query:  MEKKSLVILLLGLWASLLGGGKGQSASNVWATYNLYNPQTIDWNYLIASVFCATWDANKPLNWRSHYGWTAFCGPVGPIGRDSCGRCLKV
        M++ SL++  L LWASLLG GKGQSASNV ATYN YNPQTI WNY+ ASVFCATWDANKPLNWR HYGWTAFCGPVGP GRDSCGRCL+V
Subjt:  MEKKSLVILLLGLWASLLGGGKGQSASNVWATYNLYNPQTIDWNYLIASVFCATWDANKPLNWRSHYGWTAFCGPVGPIGRDSCGRCLKV

A0A5D3D4G8 Pathogenesis-related protein PR-4-like5.4e-2968.89Show/hide
Query:  MEKKSLVILLLGLWASLLGGGKGQSASNVWATYNLYNPQTIDWNYLIASVFCATWDANKPLNWRSHYGWTAFCGPVGPIGRDSCGRCLKV
        MEK S++++L+ L   +L     QSA+NV ATY+LYNPQ I+W+YL ASVFCATWDANKPL WR  YGWTAFCGPVGP GRDSCGRCL+V
Subjt:  MEKKSLVILLLGLWASLLGGGKGQSASNVWATYNLYNPQTIDWNYLIASVFCATWDANKPLNWRSHYGWTAFCGPVGPIGRDSCGRCLKV

A0A6J1CNH9 pathogenesis-related protein PR-4-like1.4e-2971.11Show/hide
Query:  MEKKSLVILLLGLWASLLGGGKGQSASNVWATYNLYNPQTIDWNYLIASVFCATWDANKPLNWRSHYGWTAFCGPVGPIGRDSCGRCLKV
        ME+  LV+L+LGL   LLG    QSA+NV ATY+LYNPQ I+W+YL ASVFCATWDANKPL WR  YGWTAFCGPVGP G+ SCGRCL+V
Subjt:  MEKKSLVILLLGLWASLLGGGKGQSASNVWATYNLYNPQTIDWNYLIASVFCATWDANKPLNWRSHYGWTAFCGPVGPIGRDSCGRCLKV

SwissProt top hitse value%identityAlignment
P09761 Wound-induced protein WIN12.7e-2568.18Show/hide
Query:  SASNVWATYNLYNPQTIDWNYLIASVFCATWDANKPLNWRSHYGWTAFCGPVGPIGRDSCGRCLKV
        SA NV ATY++YNPQ + W+    S +C+TWDANKPL+WR  YGWTAFCGPVGP GRDSCG+CL+V
Subjt:  SASNVWATYNLYNPQTIDWNYLIASVFCATWDANKPLNWRSHYGWTAFCGPVGPIGRDSCGRCLKV

P09762 Wound-induced protein WIN24.1e-2667.14Show/hide
Query:  GKGQSASNVWATYNLYNPQTIDWNYLIASVFCATWDANKPLNWRSHYGWTAFCGPVGPIGRDSCGRCLKV
        G+G SA NV ATY++YNPQ + W+    S +C+TWDANKP  WRS YGWTAFCGPVGP GRDSCG+CL+V
Subjt:  GKGQSASNVWATYNLYNPQTIDWNYLIASVFCATWDANKPLNWRSHYGWTAFCGPVGPIGRDSCGRCLKV

P29062 Pathogenesis-related protein PR-4A5.4e-2671.64Show/hide
Query:  QSASNVWATYNLYNPQTIDWNYLIASVFCATWDANKPLNWRSHYGWTAFCGPVGPIGRDSCGRCLKV
        QSA+NV +TY+LYNPQ I+W+   AS FCATWDA+KPL WR  YGWTAFCGP GP G+DSCGRCL+V
Subjt:  QSASNVWATYNLYNPQTIDWNYLIASVFCATWDANKPLNWRSHYGWTAFCGPVGPIGRDSCGRCLKV

P29063 Pathogenesis-related protein PR-4B1.2e-2560Show/hide
Query:  LVILLLGLWASLLGGGKGQSASNVWATYNLYNPQTIDWNYLIASVFCATWDANKPLNWRSHYGWTAFCGPVGPIGRDSCGRCLKV
        L + LL + + ++     QSA+NV +TY+LYNPQ I+W+   AS FCATWDA+KPL WR  YGWTAFCGP GP G+DSCGRCL+V
Subjt:  LVILLLGLWASLLGGGKGQSASNVWATYNLYNPQTIDWNYLIASVFCATWDANKPLNWRSHYGWTAFCGPVGPIGRDSCGRCLKV

P32045 Pathogenesis-related protein P29.2e-2655.56Show/hide
Query:  MEKKSLVILLLGLWASLLGGGKGQSASNVWATYNLYNPQTIDWNYLIASVFCATWDANKPLNWRSHYGWTAFCGPVGPIGRDSCGRCLKV
        ME+ + + +   +   ++     QSA+NV ATY+LYNPQ I+W+   ASV+CATWDA+KPL WR  YGWTAFCGP GP G+ SCGRCL+V
Subjt:  MEKKSLVILLLGLWASLLGGGKGQSASNVWATYNLYNPQTIDWNYLIASVFCATWDANKPLNWRSHYGWTAFCGPVGPIGRDSCGRCLKV

Arabidopsis top hitse value%identityAlignment
AT3G04720.1 pathogenesis-related 44.0e-2461.43Show/hide
Query:  GKGQSASNVWATYNLYNPQTIDWNYLIASVFCATWDANKPLNWRSHYGWTAFCGPVGPIGRDSCGRCLKV
        G G+SASNV ATY+ YNP   +W+    S +C+TWDA+KP  WRS YGWTAFCGP GP G+ SCG+CL+V
Subjt:  GKGQSASNVWATYNLYNPQTIDWNYLIASVFCATWDANKPLNWRSHYGWTAFCGPVGPIGRDSCGRCLKV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGAAAAAAAGTTTGGTGATTTTGTTGTTGGGTTTGTGGGCGAGCCTGCTCGGTGGTGGCAAGGGGCAAAGCGCAAGCAATGTGTGGGCAACCTATAATTTGTACAA
TCCTCAAACCATAGACTGGAATTATTTAATAGCCAGTGTGTTTTGTGCAACTTGGGATGCTAATAAGCCATTGAATTGGCGCAGCCACTACGGTTGGACTGCCTTTTGTG
GCCCCGTCGGCCCTATCGGCCGAGATTCTTGTGGCCGTTGCCTTAAGGTATGCGTCCATCTCTCTCGTATTCGGTTCGGTTCGGTCCAATTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAGAAAAAAAGTTTGGTGATTTTGTTGTTGGGTTTGTGGGCGAGCCTGCTCGGTGGTGGCAAGGGGCAAAGCGCAAGCAATGTGTGGGCAACCTATAATTTGTACAA
TCCTCAAACCATAGACTGGAATTATTTAATAGCCAGTGTGTTTTGTGCAACTTGGGATGCTAATAAGCCATTGAATTGGCGCAGCCACTACGGTTGGACTGCCTTTTGTG
GCCCCGTCGGCCCTATCGGCCGAGATTCTTGTGGCCGTTGCCTTAAGGTATGCGTCCATCTCTCTCGTATTCGGTTCGGTTCGGTCCAATTTTAA
Protein sequenceShow/hide protein sequence
MEKKSLVILLLGLWASLLGGGKGQSASNVWATYNLYNPQTIDWNYLIASVFCATWDANKPLNWRSHYGWTAFCGPVGPIGRDSCGRCLKVCVHLSRIRFGSVQF