; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10006530 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10006530
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionPathogenesis-related protein PR-4-like
Genome locationChr07:19579576..19580669
RNA-Seq ExpressionHG10006530
SyntenyHG10006530
Gene Ontology termsGO:0042742 - defense response to bacterium (biological process)
GO:0050832 - defense response to fungus (biological process)
GO:0090501 - RNA phosphodiester bond hydrolysis (biological process)
GO:0004540 - ribonuclease activity (molecular function)
InterPro domainsIPR001153 - Barwin domain
IPR018226 - Barwin, conserved site
IPR036908 - RlpA-like domain superfamily
IPR044301 - Pathogenesis-related protein-4


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0063600.1 pathogenesis-related protein PR-4-like [Cucumis melo var. makuwa]1.7e-6390.32Show/hide
Query:  MSKAQSGSNIRATFNLYNAPQINWDLNVVSAFCSTWDADKPLEWRSQYGWTAFCGPVGPQGQDSCGLCLSVTNIETGARETVRIVDQCSNGGLDLDIGVF
        MSKAQSGSN+RATFNLYNAPQINWDLN VSAFCSTWDA+KPLEWRSQYGWTAFCGP+GP GQDSCGLCL VTN++TG +ETVRIVDQCSNGGLDLD+GVF
Subjt:  MSKAQSGSNIRATFNLYNAPQINWDLNVVSAFCSTWDADKPLEWRSQYGWTAFCGPVGPQGQDSCGLCLSVTNIETGARETVRIVDQCSNGGLDLDIGVF

Query:  QNLDTDGNGNANGFLTVNYDFVNC
        Q+LDTDGNGNANGFLTVNYDFVNC
Subjt:  QNLDTDGNGNANGFLTVNYDFVNC

KAG6599313.1 Wound-induced protein WIN1, partial [Cucurbita argyrosperma subsp. sororia]1.0e-6086.29Show/hide
Query:  MSKAQSGSNIRATFNLYNAPQINWDLNVVSAFCSTWDADKPLEWRSQYGWTAFCGPVGPQGQDSCGLCLSVTNIETGARETVRIVDQCSNGGLDLDIGVF
        +SKAQS SN+RATFNLYNAP+INWD N VSAFCSTWDAD+PLEWRSQYGWTAFCGPVGPQG+DSCGLCL VTN ETGA++TVRIVDQC+NGGLDLD+GVF
Subjt:  MSKAQSGSNIRATFNLYNAPQINWDLNVVSAFCSTWDADKPLEWRSQYGWTAFCGPVGPQGQDSCGLCLSVTNIETGARETVRIVDQCSNGGLDLDIGVF

Query:  QNLDTDGNGNANGFLTVNYDFVNC
        ++LDTDGNGNANGFLTV+YDFVNC
Subjt:  QNLDTDGNGNANGFLTVNYDFVNC

XP_022946139.1 pathogenesis-related protein PR-4-like [Cucurbita moschata]1.3e-6087.1Show/hide
Query:  MSKAQSGSNIRATFNLYNAPQINWDLNVVSAFCSTWDADKPLEWRSQYGWTAFCGPVGPQGQDSCGLCLSVTNIETGARETVRIVDQCSNGGLDLDIGVF
        +SKAQS SN+RATFNLYNAP+INWDLN VSAFCSTWDAD+PLEWRSQYGWTAFCGPVGPQG+DSCGLCL VTN ETGA++ VRIVDQC+NGGLDLD+GVF
Subjt:  MSKAQSGSNIRATFNLYNAPQINWDLNVVSAFCSTWDADKPLEWRSQYGWTAFCGPVGPQGQDSCGLCLSVTNIETGARETVRIVDQCSNGGLDLDIGVF

Query:  QNLDTDGNGNANGFLTVNYDFVNC
        Q+LDTDGNGNANGFLTV+YDFVNC
Subjt:  QNLDTDGNGNANGFLTVNYDFVNC

XP_023521170.1 pathogenesis-related protein PR-4-like [Cucurbita pepo subsp. pepo]7.7e-6186.29Show/hide
Query:  MSKAQSGSNIRATFNLYNAPQINWDLNVVSAFCSTWDADKPLEWRSQYGWTAFCGPVGPQGQDSCGLCLSVTNIETGARETVRIVDQCSNGGLDLDIGVF
        +SKAQS SN+RATFN YNAP+INWDLN VSAFCSTWDAD+PLEWRSQYGWTAFCGPVGPQG+DSCGLCL VTN ET A++TVRIVDQC+NGGLDLD+GVF
Subjt:  MSKAQSGSNIRATFNLYNAPQINWDLNVVSAFCSTWDADKPLEWRSQYGWTAFCGPVGPQGQDSCGLCLSVTNIETGARETVRIVDQCSNGGLDLDIGVF

Query:  QNLDTDGNGNANGFLTVNYDFVNC
        Q+LDTDGNGNANGFLT+NYDFVNC
Subjt:  QNLDTDGNGNANGFLTVNYDFVNC

XP_023545388.1 pathogenesis-related protein PR-4-like [Cucurbita pepo subsp. pepo]7.7e-6186.29Show/hide
Query:  MSKAQSGSNIRATFNLYNAPQINWDLNVVSAFCSTWDADKPLEWRSQYGWTAFCGPVGPQGQDSCGLCLSVTNIETGARETVRIVDQCSNGGLDLDIGVF
        +SKAQS SN+RATFN YNAP+INWDLN VSAFCSTWDAD+PLEWRSQYGWTAFCGPVGPQG+DSCGLCL VTN ET A++TVRIVDQC+NGGLDLD+GVF
Subjt:  MSKAQSGSNIRATFNLYNAPQINWDLNVVSAFCSTWDADKPLEWRSQYGWTAFCGPVGPQGQDSCGLCLSVTNIETGARETVRIVDQCSNGGLDLDIGVF

Query:  QNLDTDGNGNANGFLTVNYDFVNC
        Q+LDTDGNGNANGFLT+NYDFVNC
Subjt:  QNLDTDGNGNANGFLTVNYDFVNC

TrEMBL top hitse value%identityAlignment
A0A0A0LG74 Barwin domain-containing protein8.3e-6187.1Show/hide
Query:  MSKAQSGSNIRATFNLYNAPQINWDLNVVSAFCSTWDADKPLEWRSQYGWTAFCGPVGPQGQDSCGLCLSVTNIETGARETVRIVDQCSNGGLDLDIGVF
        MSKAQSGSN+RATFNLYNAPQINWDLN VSAFCSTWDA++PLEWRSQYGWTAFCGP+GP GQ SCGLCL VTN++TGA++TVRIVDQCSNGGLDLD+GVF
Subjt:  MSKAQSGSNIRATFNLYNAPQINWDLNVVSAFCSTWDADKPLEWRSQYGWTAFCGPVGPQGQDSCGLCLSVTNIETGARETVRIVDQCSNGGLDLDIGVF

Query:  QNLDTDGNGNANGFLTVNYDFVNC
        Q+LDTDGNG ANGFLT+NYDFVNC
Subjt:  QNLDTDGNGNANGFLTVNYDFVNC

A0A5D3D4F5 Pathogenesis-related protein PR-4-like8.1e-6490.32Show/hide
Query:  MSKAQSGSNIRATFNLYNAPQINWDLNVVSAFCSTWDADKPLEWRSQYGWTAFCGPVGPQGQDSCGLCLSVTNIETGARETVRIVDQCSNGGLDLDIGVF
        MSKAQSGSN+RATFNLYNAPQINWDLN VSAFCSTWDA+KPLEWRSQYGWTAFCGP+GP GQDSCGLCL VTN++TG +ETVRIVDQCSNGGLDLD+GVF
Subjt:  MSKAQSGSNIRATFNLYNAPQINWDLNVVSAFCSTWDADKPLEWRSQYGWTAFCGPVGPQGQDSCGLCLSVTNIETGARETVRIVDQCSNGGLDLDIGVF

Query:  QNLDTDGNGNANGFLTVNYDFVNC
        Q+LDTDGNGNANGFLTVNYDFVNC
Subjt:  QNLDTDGNGNANGFLTVNYDFVNC

A0A6J1CMK0 pathogenesis-related protein PR-4-like4.1e-6085.48Show/hide
Query:  MSKAQSGSNIRATFNLYNAPQINWDLNVVSAFCSTWDADKPLEWRSQYGWTAFCGPVGPQGQDSCGLCLSVTNIETGARETVRIVDQCSNGGLDLDIGVF
        +S+ QSGSN+RAT+NLYNAPQINWDLN VSAFC+TWDA++PLEWRSQYGWTAFCGPVGP GQDSCG CL VTN ETGA++TVRIVDQCSNGGLDLD+GVF
Subjt:  MSKAQSGSNIRATFNLYNAPQINWDLNVVSAFCSTWDADKPLEWRSQYGWTAFCGPVGPQGQDSCGLCLSVTNIETGARETVRIVDQCSNGGLDLDIGVF

Query:  QNLDTDGNGNANGFLTVNYDFVNC
        Q+LDT+GNGNANGFLTVNYDFVNC
Subjt:  QNLDTDGNGNANGFLTVNYDFVNC

A0A6J1G2Y5 pathogenesis-related protein PR-4-like6.4e-6187.1Show/hide
Query:  MSKAQSGSNIRATFNLYNAPQINWDLNVVSAFCSTWDADKPLEWRSQYGWTAFCGPVGPQGQDSCGLCLSVTNIETGARETVRIVDQCSNGGLDLDIGVF
        +SKAQS SN+RATFNLYNAP+INWDLN VSAFCSTWDAD+PLEWRSQYGWTAFCGPVGPQG+DSCGLCL VTN ETGA++ VRIVDQC+NGGLDLD+GVF
Subjt:  MSKAQSGSNIRATFNLYNAPQINWDLNVVSAFCSTWDADKPLEWRSQYGWTAFCGPVGPQGQDSCGLCLSVTNIETGARETVRIVDQCSNGGLDLDIGVF

Query:  QNLDTDGNGNANGFLTVNYDFVNC
        Q+LDTDGNGNANGFLTV+YDFVNC
Subjt:  QNLDTDGNGNANGFLTVNYDFVNC

A0A6J1KG47 pathogenesis-related protein PR-4-like6.4e-6187.1Show/hide
Query:  MSKAQSGSNIRATFNLYNAPQINWDLNVVSAFCSTWDADKPLEWRSQYGWTAFCGPVGPQGQDSCGLCLSVTNIETGARETVRIVDQCSNGGLDLDIGVF
        +SKAQS SN+RATFNLYNAP+INWDLN VSAFCSTWDAD+PLEWRSQYGWTAFCGPVGPQGQDSCGLCL VTN ETGA++TVRIVDQC+NGGLDLD+GVF
Subjt:  MSKAQSGSNIRATFNLYNAPQINWDLNVVSAFCSTWDADKPLEWRSQYGWTAFCGPVGPQGQDSCGLCLSVTNIETGARETVRIVDQCSNGGLDLDIGVF

Query:  QNLDTDGNGNANGFLTVNYDFVNC
        Q+LDTDGNGNANGFL V+YDFV C
Subjt:  QNLDTDGNGNANGFLTVNYDFVNC

SwissProt top hitse value%identityAlignment
P09761 Wound-induced protein WIN13.2e-4969.75Show/hide
Query:  SGSNIRATFNLYNAPQINWDLNVVSAFCSTWDADKPLEWRSQYGWTAFCGPVGPQGQDSCGLCLSVTNIETGARETVRIVDQCSNGGLDLDIGVFQNLDT
        S  N+RAT+++YN   + WDLN VSA+CSTWDA+KPL WR +YGWTAFCGPVGP+G+DSCG CL VTN  TGA+ TVRIVDQCSNGGLDLD+ VF+ +DT
Subjt:  SGSNIRATFNLYNAPQINWDLNVVSAFCSTWDADKPLEWRSQYGWTAFCGPVGPQGQDSCGLCLSVTNIETGARETVRIVDQCSNGGLDLDIGVFQNLDT

Query:  DGNGNANGFLTVNYDFVNC
        DGNGN  G L VNY FV+C
Subjt:  DGNGNANGFLTVNYDFVNC

P09762 Wound-induced protein WIN23.2e-4971.43Show/hide
Query:  SGSNIRATFNLYNAPQINWDLNVVSAFCSTWDADKPLEWRSQYGWTAFCGPVGPQGQDSCGLCLSVTNIETGARETVRIVDQCSNGGLDLDIGVFQNLDT
        S  N+RAT+++YN   + WDLN VSA+CSTWDA+KP  WRS+YGWTAFCGPVGP+G+DSCG CL VTN  TGA+ TVRIVDQCSNGGLDLDI VFQ +DT
Subjt:  SGSNIRATFNLYNAPQINWDLNVVSAFCSTWDADKPLEWRSQYGWTAFCGPVGPQGQDSCGLCLSVTNIETGARETVRIVDQCSNGGLDLDIGVFQNLDT

Query:  DGNGNANGFLTVNYDFVNC
        DG GN  G L VNY FVNC
Subjt:  DGNGNANGFLTVNYDFVNC

P29062 Pathogenesis-related protein PR-4A1.9e-4969.35Show/hide
Query:  MSKAQSGSNIRATFNLYNAPQINWDLNVVSAFCSTWDADKPLEWRSQYGWTAFCGPVGPQGQDSCGLCLSVTNIETGARETVRIVDQCSNGGLDLDIGVF
        M+ AQS +N+R+T++LYN   INWDL   SAFC+TWDADKPL WR +YGWTAFCGP GP+GQDSCG CL VTN  TG + TVRIVDQCSNGGLDLD+ VF
Subjt:  MSKAQSGSNIRATFNLYNAPQINWDLNVVSAFCSTWDADKPLEWRSQYGWTAFCGPVGPQGQDSCGLCLSVTNIETGARETVRIVDQCSNGGLDLDIGVF

Query:  QNLDTDGNGNANGFLTVNYDFVNC
          LDT+G G   G LTVNY+FVNC
Subjt:  QNLDTDGNGNANGFLTVNYDFVNC

P29063 Pathogenesis-related protein PR-4B9.2e-4968.55Show/hide
Query:  MSKAQSGSNIRATFNLYNAPQINWDLNVVSAFCSTWDADKPLEWRSQYGWTAFCGPVGPQGQDSCGLCLSVTNIETGARETVRIVDQCSNGGLDLDIGVF
        M+ AQS +N+R+T++LYN   INWDL   SAFC+TWDADKPL WR +YGWTAFCGP GP+GQDSCG CL VTN  TG + TVRIVDQCSNGGLDLD+ VF
Subjt:  MSKAQSGSNIRATFNLYNAPQINWDLNVVSAFCSTWDADKPLEWRSQYGWTAFCGPVGPQGQDSCGLCLSVTNIETGARETVRIVDQCSNGGLDLDIGVF

Query:  QNLDTDGNGNANGFLTVNYDFVNC
          LDT+G G   G L VNY+FVNC
Subjt:  QNLDTDGNGNANGFLTVNYDFVNC

P32045 Pathogenesis-related protein P23.0e-4766.94Show/hide
Query:  MSKAQSGSNIRATFNLYNAPQINWDLNVVSAFCSTWDADKPLEWRSQYGWTAFCGPVGPQGQDSCGLCLSVTNIETGARETVRIVDQCSNGGLDLDIGVF
        ++ AQS +N+RAT++LYN   INWDL   S +C+TWDADKPLEWR +YGWTAFCGP GP GQ SCG CL VTN  TG +ETVRIVDQC NGGLDLD+ VF
Subjt:  MSKAQSGSNIRATFNLYNAPQINWDLNVVSAFCSTWDADKPLEWRSQYGWTAFCGPVGPQGQDSCGLCLSVTNIETGARETVRIVDQCSNGGLDLDIGVF

Query:  QNLDTDGNGNANGFLTVNYDFVNC
          LDT+G G   G L VNY+FVNC
Subjt:  QNLDTDGNGNANGFLTVNYDFVNC

Arabidopsis top hitse value%identityAlignment
AT3G04720.1 pathogenesis-related 41.7e-4565.83Show/hide
Query:  QSGSNIRATFNLYNAPQINWDLNVVSAFCSTWDADKPLEWRSQYGWTAFCGPVGPQGQDSCGLCLSVTNIETGARETVRIVDQCSNGGLDLDIGVFQNLD
        +S SN+RAT++ YN  Q NWDL  VSA+CSTWDADKP  WRS+YGWTAFCGP GP+GQ SCG CL V N  T A  TVRIVDQCSNGGLDLD+ +F  +D
Subjt:  QSGSNIRATFNLYNAPQINWDLNVVSAFCSTWDADKPLEWRSQYGWTAFCGPVGPQGQDSCGLCLSVTNIETGARETVRIVDQCSNGGLDLDIGVFQNLD

Query:  TDGNGNANGFLTVNYDFVNC
        TDG G   G L V+Y FV+C
Subjt:  TDGNGNANGFLTVNYDFVNC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCCAAAGCTCAAAGTGGGAGCAATATTAGAGCAACATTTAACTTATACAATGCCCCACAAATCAATTGGGATTTGAATGTTGTGAGTGCATTTTGTTCAACATGGGA
TGCTGATAAGCCTTTGGAATGGCGTAGCCAATATGGATGGACTGCCTTTTGTGGCCCTGTTGGACCTCAAGGCCAAGACTCTTGTGGCCTATGTTTATCGGTGACGAATA
TTGAAACAGGCGCTCGAGAAACCGTTAGAATTGTAGATCAATGTAGTAATGGAGGCCTAGATTTGGACATTGGGGTGTTTCAAAATCTCGATACCGATGGAAATGGCAAT
GCTAATGGCTTTCTCACAGTCAACTATGATTTTGTTAATTGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCCAAAGCTCAAAGTGGGAGCAATATTAGAGCAACATTTAACTTATACAATGCCCCACAAATCAATTGGGATTTGAATGTTGTGAGTGCATTTTGTTCAACATGGGA
TGCTGATAAGCCTTTGGAATGGCGTAGCCAATATGGATGGACTGCCTTTTGTGGCCCTGTTGGACCTCAAGGCCAAGACTCTTGTGGCCTATGTTTATCGGTGACGAATA
TTGAAACAGGCGCTCGAGAAACCGTTAGAATTGTAGATCAATGTAGTAATGGAGGCCTAGATTTGGACATTGGGGTGTTTCAAAATCTCGATACCGATGGAAATGGCAAT
GCTAATGGCTTTCTCACAGTCAACTATGATTTTGTTAATTGTTGA
Protein sequenceShow/hide protein sequence
MSKAQSGSNIRATFNLYNAPQINWDLNVVSAFCSTWDADKPLEWRSQYGWTAFCGPVGPQGQDSCGLCLSVTNIETGARETVRIVDQCSNGGLDLDIGVFQNLDTDGNGN
ANGFLTVNYDFVNC