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HG10006546 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10006546
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionPhosphoribosylaminoimidazole carboxylase atpase-subunit isoform 1
Genome locationChr07:19708671..19708991
RNA-Seq ExpressionHG10006546
SyntenyHG10006546
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0063581.1 hypothetical protein E6C27_scaffold329G00910 [Cucumis melo var. makuwa]9.3e-3983.96Show/hide
Query:  MAFSLMKTAAFVFIFLCIFDMSAAARFFPGPRLSIAVLRGPVPSSSRNPCSFIPGFSRGRCTLSEVEDGPVDVHGGSSAFPGLNADGFAAASMVNQTQKQ
        MAFSL+KT AF+FIFL IFD+S   R+ PG R+ IAVLRGPVPSSSRNPCSFIPGFSRGRCTLSEV+DG   VHGGSSAFPGLNADGFAAASMVNQTQKQ
Subjt:  MAFSLMKTAAFVFIFLCIFDMSAAARFFPGPRLSIAVLRGPVPSSSRNPCSFIPGFSRGRCTLSEVEDGPVDVHGGSSAFPGLNADGFAAASMVNQTQKQ

Query:  DSSLSS
        DSSLSS
Subjt:  DSSLSS

KAG6586324.1 hypothetical protein SDJN03_19057, partial [Cucurbita argyrosperma subsp. sororia]1.9e-2366.67Show/hide
Query:  MAFSLMKT--AAFVFIFLCIFDMSAAARFFPGPR---LSIAVLRGPVPSSSRNPCSFIPGFSRGRCTLSEVED--GPVDVHGGSSAFPGLNADGFAAASM
        M FS+MKT  AAFVFI LCIF +S AAR   G R   +S  +LRG VP S RNPCSFIPG  RGRCTLSEVED  G     GGSSAFPG+N DGF+AA+M
Subjt:  MAFSLMKT--AAFVFIFLCIFDMSAAARFFPGPR---LSIAVLRGPVPSSSRNPCSFIPGFSRGRCTLSEVED--GPVDVHGGSSAFPGLNADGFAAASM

Query:  VNQTQKQDSSL
        VN TQKQD SL
Subjt:  VNQTQKQDSSL

KAG6599331.1 hypothetical protein SDJN03_09109, partial [Cucurbita argyrosperma subsp. sororia]4.5e-2575.95Show/hide
Query:  RFFPGPRLSIAVLRGPVPSSSRNPCSFIPGFSRGRCTLSEVEDGPVDVHGGSSAFPGLNADGFAAASMVNQTQKQDSSL
        R+ P PR+ +A+LRG VPSSSRNPCSFIPGFSRGRCTLSE +DG   VHGGSSA  GLNADGFAAASM N+TQK+D SL
Subjt:  RFFPGPRLSIAVLRGPVPSSSRNPCSFIPGFSRGRCTLSEVEDGPVDVHGGSSAFPGLNADGFAAASMVNQTQKQDSSL

KGN60782.1 hypothetical protein Csa_019261 [Cucumis sativus]1.3e-3576.58Show/hide
Query:  MAFSLMKTAAFVFIFLCIFDMSAA-----ARFFPGPRLSIAVLRGPVPSSSRNPCSFIPGFSRGRCTLSEVEDGPVDVHGGSSAFPGLNADGFAAASMVN
        MAFSLMKT AF+FIFL I DMSAA      R+ PG  +  A+LRGPVPSSSRNPCSFIPGFSRGRCTLSEV++G   V GGSSAFPGLNADGFAAAS+VN
Subjt:  MAFSLMKTAAFVFIFLCIFDMSAA-----ARFFPGPRLSIAVLRGPVPSSSRNPCSFIPGFSRGRCTLSEVEDGPVDVHGGSSAFPGLNADGFAAASMVN

Query:  QTQKQDSSLSS
        QTQKQDSS+SS
Subjt:  QTQKQDSSLSS

XP_021888699.1 uncharacterized protein LOC110807772 [Carica papaya]7.9e-0637.27Show/hide
Query:  SLMKTAAFVFIFLCIFDMSAAA-------RFFPGPRLSIAVLRGPVPSSSRNPCSFIPGFSRGRCTLSEVEDGPVDVHGGSSAFPGLNADGFAAA---SM
        ++ K A  V +  C  +   AA       ++     +  ++ RGPVP S  NPC+FIPG +RGRCTLSE++         ++AFP +  D  A     S 
Subjt:  SLMKTAAFVFIFLCIFDMSAAA-------RFFPGPRLSIAVLRGPVPSSSRNPCSFIPGFSRGRCTLSEVEDGPVDVHGGSSAFPGLNADGFAAA---SM

Query:  VNQTQKQDSS
         N+TQKQDSS
Subjt:  VNQTQKQDSS

TrEMBL top hitse value%identityAlignment
A0A0A0LJ84 Uncharacterized protein6.1e-3676.58Show/hide
Query:  MAFSLMKTAAFVFIFLCIFDMSAA-----ARFFPGPRLSIAVLRGPVPSSSRNPCSFIPGFSRGRCTLSEVEDGPVDVHGGSSAFPGLNADGFAAASMVN
        MAFSLMKT AF+FIFL I DMSAA      R+ PG  +  A+LRGPVPSSSRNPCSFIPGFSRGRCTLSEV++G   V GGSSAFPGLNADGFAAAS+VN
Subjt:  MAFSLMKTAAFVFIFLCIFDMSAA-----ARFFPGPRLSIAVLRGPVPSSSRNPCSFIPGFSRGRCTLSEVEDGPVDVHGGSSAFPGLNADGFAAASMVN

Query:  QTQKQDSSLSS
        QTQKQDSS+SS
Subjt:  QTQKQDSSLSS

A0A5A7VCY2 Uncharacterized protein4.5e-3983.96Show/hide
Query:  MAFSLMKTAAFVFIFLCIFDMSAAARFFPGPRLSIAVLRGPVPSSSRNPCSFIPGFSRGRCTLSEVEDGPVDVHGGSSAFPGLNADGFAAASMVNQTQKQ
        MAFSL+KT AF+FIFL IFD+S   R+ PG R+ IAVLRGPVPSSSRNPCSFIPGFSRGRCTLSEV+DG   VHGGSSAFPGLNADGFAAASMVNQTQKQ
Subjt:  MAFSLMKTAAFVFIFLCIFDMSAAARFFPGPRLSIAVLRGPVPSSSRNPCSFIPGFSRGRCTLSEVEDGPVDVHGGSSAFPGLNADGFAAASMVNQTQKQ

Query:  DSSLSS
        DSSLSS
Subjt:  DSSLSS

A0A5B6Z7Q1 Uncharacterized protein (Fragment)5.6e-0548.57Show/hide
Query:  RGPVPSSSRNPCSFIPGFSRGRCTLSEVEDGPVDVHGG-----SSAFPGLNADGFAAASMVNQTQKQDSS
        RGPVPSS  NPC++IPG   GRCTL+E E      H        +AFP      FAAAS  N T+K+D+S
Subjt:  RGPVPSSSRNPCSFIPGFSRGRCTLSEVEDGPVDVHGG-----SSAFPGLNADGFAAASMVNQTQKQDSS

A0A5B6Z868 Uncharacterized protein6.6e-0652.24Show/hide
Query:  RGPVPSSSRNPCSFIPGFSRGRCTLSEVE---DGPVDVHGGSSAFPGLNADGFAAASMVNQTQKQDS
        RGPVPSS  NPC++IPG   GRCTL+E E    G +  H    AFP    + FAAAS  N TQK+D+
Subjt:  RGPVPSSSRNPCSFIPGFSRGRCTLSEVE---DGPVDVHGGSSAFPGLNADGFAAASMVNQTQKQDS

A0A6A4KR04 Uncharacterized protein (Fragment)1.5e-0551.47Show/hide
Query:  RGPVPSSSRNPCSFIPGFSRGRCTLSEVE---DGPVDVHGGSSAFPGLNADGFAAASMVNQTQKQDSS
        RGPV  S  NPC++IPG  RGRCTL+E E    G V  H    AFPG+    FA AS  N ++KQD S
Subjt:  RGPVPSSSRNPCSFIPGFSRGRCTLSEVE---DGPVDVHGGSSAFPGLNADGFAAASMVNQTQKQDSS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTTTTCCCTTATGAAGACGGCTGCCTTTGTTTTCATTTTTCTTTGTATTTTCGACATGTCCGCCGCCGCTAGGTTCTTTCCGGGGCCGAGGCTTTCCATCGCGGT
GCTGCGAGGTCCCGTGCCCAGTTCTAGTAGGAATCCGTGTTCCTTTATTCCGGGGTTTAGTCGGGGCCGGTGTACGTTGAGCGAGGTGGAGGACGGTCCTGTCGATGTCC
ATGGTGGCTCCTCCGCCTTCCCTGGCCTGAATGCTGATGGGTTTGCTGCGGCTTCTATGGTTAACCAAACCCAGAAGCAAGATTCTTCTTTGAGCTCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCTTTTTCCCTTATGAAGACGGCTGCCTTTGTTTTCATTTTTCTTTGTATTTTCGACATGTCCGCCGCCGCTAGGTTCTTTCCGGGGCCGAGGCTTTCCATCGCGGT
GCTGCGAGGTCCCGTGCCCAGTTCTAGTAGGAATCCGTGTTCCTTTATTCCGGGGTTTAGTCGGGGCCGGTGTACGTTGAGCGAGGTGGAGGACGGTCCTGTCGATGTCC
ATGGTGGCTCCTCCGCCTTCCCTGGCCTGAATGCTGATGGGTTTGCTGCGGCTTCTATGGTTAACCAAACCCAGAAGCAAGATTCTTCTTTGAGCTCTTGA
Protein sequenceShow/hide protein sequence
MAFSLMKTAAFVFIFLCIFDMSAAARFFPGPRLSIAVLRGPVPSSSRNPCSFIPGFSRGRCTLSEVEDGPVDVHGGSSAFPGLNADGFAAASMVNQTQKQDSSLSS