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HG10006559 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10006559
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionB3 domain-containing protein At2g31720-like
Genome locationChr07:19841897..19842571
RNA-Seq ExpressionHG10006559
SyntenyHG10006559
Gene Ontology termsGO:0003677 - DNA binding (molecular function)
InterPro domainsIPR005508 - B3 domain-containing protein At2g31720-like
IPR015300 - DNA-binding pseudobarrel domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6599340.1 B3 domain-containing protein, partial [Cucurbita argyrosperma subsp. sororia]5.0e-2651.91Show/hide
Query:  DLDGEIE-VVGYEMPAEMREYITERMGLW-VANDNRKGIDGDGHEEVSGRLSLPAKQLRAKFLTAEEVTYFEDRSEVNNGLNYIDTIVVGSDLRENPMQF
        D D EI+ V   EMPAEMRE+ITERMG + V     K +         GRLSLP K +R +F+TAEE    E RS+ ++ LNYIDT +VGSDL+ NP++F
Subjt:  DLDGEIE-VVGYEMPAEMREYITERMGLW-VANDNRKGIDGDGHEEVSGRLSLPAKQLRAKFLTAEEVTYFEDRSEVNNGLNYIDTIVVGSDLRENPMQF

Query:  KKWLLGARFVNFLLKKWNSFSKTYRLKVGNR
        KKWL+G  +VN L+ KWNSF++ Y LK G +
Subjt:  KKWLLGARFVNFLLKKWNSFSKTYRLKVGNR

XP_008445569.1 PREDICTED: putative B3 domain-containing protein At3g49610 [Cucumis melo]3.6e-0830.86Show/hide
Query:  RRRKTETNQMLQWRTVTTRCRNSTGARKQVDLDGEIEVVGYEMPAEMREYITERMGLWVANDNRKGIDGDGHEEVSGRLSLPAKQLRAKFLTAEEVTYFE
        R+RK         ++ T + R  + + KQ     E+E    EMPA MR+ I    G  +    +K ++        GRL LPA +++ +F+  EE    E
Subjt:  RRRKTETNQMLQWRTVTTRCRNSTGARKQVDLDGEIEVVGYEMPAEMREYITERMGLWVANDNRKGIDGDGHEEVSGRLSLPAKQLRAKFLTAEEVTYFE

Query:  DRSEVNNGLNY----IDTIVVGSDLRENPMQFKKWLLGARFVNFLLKKWNSFSKTYRLKVGN
           E NNG       ++  V+G DLRE+ M  KKW +G+     L+K WN F +   L+ G+
Subjt:  DRSEVNNGLNY----IDTIVVGSDLRENPMQFKKWLLGARFVNFLLKKWNSFSKTYRLKVGN

XP_022946870.1 B3 domain-containing protein At2g31720-like [Cucurbita moschata]5.0e-2651.91Show/hide
Query:  DLDGEIE-VVGYEMPAEMREYITERMGLW-VANDNRKGIDGDGHEEVSGRLSLPAKQLRAKFLTAEEVTYFEDRSEVNNGLNYIDTIVVGSDLRENPMQF
        D D EI+ V   EMPAEMRE+ITERMG + V     K +         GRLSLP K +R +F+TAEE    E RS+ ++ LNYIDT +VGSDL+ NP++F
Subjt:  DLDGEIE-VVGYEMPAEMREYITERMGLW-VANDNRKGIDGDGHEEVSGRLSLPAKQLRAKFLTAEEVTYFEDRSEVNNGLNYIDTIVVGSDLRENPMQF

Query:  KKWLLGARFVNFLLKKWNSFSKTYRLKVGNR
        KKWL+G  +VN L+ KWNSF++ Y LK G +
Subjt:  KKWLLGARFVNFLLKKWNSFSKTYRLKVGNR

XP_022998957.1 B3 domain-containing protein At2g31720-like [Cucurbita maxima]7.7e-2753.44Show/hide
Query:  DLDGEIE-VVGYEMPAEMREYITERMGLW-VANDNRKGIDGDGHEEVSGRLSLPAKQLRAKFLTAEEVTYFEDRSEVNNGLNYIDTIVVGSDLRENPMQF
        D D EI+ VV  EMPAEMRE+ITERMG + V     K +         GRLSLP K +R +F+TAEE    E RS+ ++ LNYIDT +VGSDLR NP++F
Subjt:  DLDGEIE-VVGYEMPAEMREYITERMGLW-VANDNRKGIDGDGHEEVSGRLSLPAKQLRAKFLTAEEVTYFEDRSEVNNGLNYIDTIVVGSDLRENPMQF

Query:  KKWLLGARFVNFLLKKWNSFSKTYRLKVGNR
        KKWL+G  +VN L+ KWNSF++ Y LK G +
Subjt:  KKWLLGARFVNFLLKKWNSFSKTYRLKVGNR

XP_023545398.1 B3 domain-containing protein At2g31720-like [Cucurbita pepo subsp. pepo]1.5e-2551.15Show/hide
Query:  DLDGEIE-VVGYEMPAEMREYITERMGLW-VANDNRKGIDGDGHEEVSGRLSLPAKQLRAKFLTAEEVTYFEDRSEVNNGLNYIDTIVVGSDLRENPMQF
        D D EI+ V   EMPAEMR++ITERMG + V     K +         GRLSLP K +R +F+TAEE    E RS+  + LNYIDT +VGSDL+ NP++F
Subjt:  DLDGEIE-VVGYEMPAEMREYITERMGLW-VANDNRKGIDGDGHEEVSGRLSLPAKQLRAKFLTAEEVTYFEDRSEVNNGLNYIDTIVVGSDLRENPMQF

Query:  KKWLLGARFVNFLLKKWNSFSKTYRLKVGNR
        KKWL+G  +VN L+ KWNSF++ Y LK G +
Subjt:  KKWLLGARFVNFLLKKWNSFSKTYRLKVGNR

TrEMBL top hitse value%identityAlignment
A0A0A0LRL4 Uncharacterized protein2.5e-0728.12Show/hide
Query:  RRRKTETNQMLQ-WRTVTTRCRNSTGARKQVDLDGEIEVVGYEMPAEMREYITERMGLWVANDNRKGIDGDGHEEVSGRLSLPAKQLRAKFLTAEEVTYF
        +R+K E+  + Q  ++ T + R ++   KQ     E+E    EMPA MR+ +  + G  +    +K ++        GRL LPAK+++ +F+  EE    
Subjt:  RRRKTETNQMLQ-WRTVTTRCRNSTGARKQVDLDGEIEVVGYEMPAEMREYITERMGLWVANDNRKGIDGDGHEEVSGRLSLPAKQLRAKFLTAEEVTYF

Query:  EDRSE-VNNGLNYIDTIVVGSDLRENPMQFKKWLLGARFVNFLLKKWNSFSKTYRLKVGN
        E+ ++        ++  V+   LRE+ M  KKW +G+     L+K WN F +   L+ G+
Subjt:  EDRSE-VNNGLNYIDTIVVGSDLRENPMQFKKWLLGARFVNFLLKKWNSFSKTYRLKVGN

A0A1S3BD17 putative B3 domain-containing protein At3g496101.7e-0830.86Show/hide
Query:  RRRKTETNQMLQWRTVTTRCRNSTGARKQVDLDGEIEVVGYEMPAEMREYITERMGLWVANDNRKGIDGDGHEEVSGRLSLPAKQLRAKFLTAEEVTYFE
        R+RK         ++ T + R  + + KQ     E+E    EMPA MR+ I    G  +    +K ++        GRL LPA +++ +F+  EE    E
Subjt:  RRRKTETNQMLQWRTVTTRCRNSTGARKQVDLDGEIEVVGYEMPAEMREYITERMGLWVANDNRKGIDGDGHEEVSGRLSLPAKQLRAKFLTAEEVTYFE

Query:  DRSEVNNGLNY----IDTIVVGSDLRENPMQFKKWLLGARFVNFLLKKWNSFSKTYRLKVGN
           E NNG       ++  V+G DLRE+ M  KKW +G+     L+K WN F +   L+ G+
Subjt:  DRSEVNNGLNY----IDTIVVGSDLRENPMQFKKWLLGARFVNFLLKKWNSFSKTYRLKVGN

A0A5A7VC33 Putative B3 domain-containing protein1.7e-0830.86Show/hide
Query:  RRRKTETNQMLQWRTVTTRCRNSTGARKQVDLDGEIEVVGYEMPAEMREYITERMGLWVANDNRKGIDGDGHEEVSGRLSLPAKQLRAKFLTAEEVTYFE
        R+RK         ++ T + R  + + KQ     E+E    EMPA MR+ I    G  +    +K ++        GRL LPA +++ +F+  EE    E
Subjt:  RRRKTETNQMLQWRTVTTRCRNSTGARKQVDLDGEIEVVGYEMPAEMREYITERMGLWVANDNRKGIDGDGHEEVSGRLSLPAKQLRAKFLTAEEVTYFE

Query:  DRSEVNNGLNY----IDTIVVGSDLRENPMQFKKWLLGARFVNFLLKKWNSFSKTYRLKVGN
           E NNG       ++  V+G DLRE+ M  KKW +G+     L+K WN F +   L+ G+
Subjt:  DRSEVNNGLNY----IDTIVVGSDLRENPMQFKKWLLGARFVNFLLKKWNSFSKTYRLKVGN

A0A6J1G587 B3 domain-containing protein At2g31720-like2.4e-2651.91Show/hide
Query:  DLDGEIE-VVGYEMPAEMREYITERMGLW-VANDNRKGIDGDGHEEVSGRLSLPAKQLRAKFLTAEEVTYFEDRSEVNNGLNYIDTIVVGSDLRENPMQF
        D D EI+ V   EMPAEMRE+ITERMG + V     K +         GRLSLP K +R +F+TAEE    E RS+ ++ LNYIDT +VGSDL+ NP++F
Subjt:  DLDGEIE-VVGYEMPAEMREYITERMGLW-VANDNRKGIDGDGHEEVSGRLSLPAKQLRAKFLTAEEVTYFEDRSEVNNGLNYIDTIVVGSDLRENPMQF

Query:  KKWLLGARFVNFLLKKWNSFSKTYRLKVGNR
        KKWL+G  +VN L+ KWNSF++ Y LK G +
Subjt:  KKWLLGARFVNFLLKKWNSFSKTYRLKVGNR

A0A6J1K9G9 B3 domain-containing protein At2g31720-like3.7e-2753.44Show/hide
Query:  DLDGEIE-VVGYEMPAEMREYITERMGLW-VANDNRKGIDGDGHEEVSGRLSLPAKQLRAKFLTAEEVTYFEDRSEVNNGLNYIDTIVVGSDLRENPMQF
        D D EI+ VV  EMPAEMRE+ITERMG + V     K +         GRLSLP K +R +F+TAEE    E RS+ ++ LNYIDT +VGSDLR NP++F
Subjt:  DLDGEIE-VVGYEMPAEMREYITERMGLW-VANDNRKGIDGDGHEEVSGRLSLPAKQLRAKFLTAEEVTYFEDRSEVNNGLNYIDTIVVGSDLRENPMQF

Query:  KKWLLGARFVNFLLKKWNSFSKTYRLKVGNR
        KKWL+G  +VN L+ KWNSF++ Y LK G +
Subjt:  KKWLLGARFVNFLLKKWNSFSKTYRLKVGNR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAAACGAAGACGACCCAGCTGGCAAAATTTCGTGGGCGTCGGAAAACAGGGACAACCCAAAAGCTGTAATGGCTAACGAAGACGACCTGGTAGAATCTCACCGGCG
CCGGAAAACAGAGACAAACCAAATGCTGCAGTGGCGAACGGTGACAACCCGTTGCCGAAATTCCACTGGCGCCAGAAAACAGGTGGATCTAGATGGAGAAATTGAAGTGG
TCGGGTACGAGATGCCAGCGGAGATGAGAGAGTATATAACAGAAAGAATGGGGTTATGGGTTGCAAATGATAATCGAAAAGGCATTGACGGCGACGGACATGAGGAAGTA
TCAGGGCGGTTGTCGCTGCCGGCGAAGCAGTTGAGAGCGAAATTTCTGACGGCAGAGGAGGTGACTTATTTCGAGGATCGGAGCGAGGTGAATAATGGATTGAATTACAT
TGACACGATCGTTGTGGGATCAGATTTGAGAGAGAATCCAATGCAATTCAAGAAGTGGCTGCTTGGGGCAAGATTTGTGAATTTTTTATTAAAAAAATGGAACTCTTTTT
CCAAAACTTACCGACTCAAGGTTGGAAATAGGTTCGAATTTGGAGATTTAGGGTTGATCAGAGAGACGATGAAAATGATATTGTTAAATCTGAACTACGTTCCGCGCTTA
TCAAGCTCTAGATGA
mRNA sequenceShow/hide mRNA sequence
ATGGAAAACGAAGACGACCCAGCTGGCAAAATTTCGTGGGCGTCGGAAAACAGGGACAACCCAAAAGCTGTAATGGCTAACGAAGACGACCTGGTAGAATCTCACCGGCG
CCGGAAAACAGAGACAAACCAAATGCTGCAGTGGCGAACGGTGACAACCCGTTGCCGAAATTCCACTGGCGCCAGAAAACAGGTGGATCTAGATGGAGAAATTGAAGTGG
TCGGGTACGAGATGCCAGCGGAGATGAGAGAGTATATAACAGAAAGAATGGGGTTATGGGTTGCAAATGATAATCGAAAAGGCATTGACGGCGACGGACATGAGGAAGTA
TCAGGGCGGTTGTCGCTGCCGGCGAAGCAGTTGAGAGCGAAATTTCTGACGGCAGAGGAGGTGACTTATTTCGAGGATCGGAGCGAGGTGAATAATGGATTGAATTACAT
TGACACGATCGTTGTGGGATCAGATTTGAGAGAGAATCCAATGCAATTCAAGAAGTGGCTGCTTGGGGCAAGATTTGTGAATTTTTTATTAAAAAAATGGAACTCTTTTT
CCAAAACTTACCGACTCAAGGTTGGAAATAGGTTCGAATTTGGAGATTTAGGGTTGATCAGAGAGACGATGAAAATGATATTGTTAAATCTGAACTACGTTCCGCGCTTA
TCAAGCTCTAGATGA
Protein sequenceShow/hide protein sequence
MENEDDPAGKISWASENRDNPKAVMANEDDLVESHRRRKTETNQMLQWRTVTTRCRNSTGARKQVDLDGEIEVVGYEMPAEMREYITERMGLWVANDNRKGIDGDGHEEV
SGRLSLPAKQLRAKFLTAEEVTYFEDRSEVNNGLNYIDTIVVGSDLRENPMQFKKWLLGARFVNFLLKKWNSFSKTYRLKVGNRFEFGDLGLIRETMKMILLNLNYVPRL
SSSR