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HG10006579 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10006579
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionUnknown protein
Genome locationChr07:20053661..20057703
RNA-Seq ExpressionHG10006579
SyntenyHG10006579
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6586348.1 Ubiquitin-like domain-containing protein CIP73, partial [Cucurbita argyrosperma subsp. sororia]5.7e-1762.92Show/hide
Query:  MKLSSMAVLLLFLIMSQAQGIRLLEKGINKEYKKNGAVSGGKNGGDLLMTMKKRAPMRALRKPYSHWLPGIQEDYHGPRKSRPKEKSLG
        MK SSMAVLLLFLI+S+A+GIRLL+K ++KE K        +NGGDLL TMK RAP +A RKPYSHWLPGIQEDYH     R  ++S+G
Subjt:  MKLSSMAVLLLFLIMSQAQGIRLLEKGINKEYKKNGAVSGGKNGGDLLMTMKKRAPMRALRKPYSHWLPGIQEDYHGPRKSRPKEKSLG
TrEMBL top hitse value%identityAlignment
A0A0A0LJ48 Uncharacterized protein1.8e-2478.75Show/hide
Query:  MAVLLLFL-IMSQAQGIRLLEKGINKEYKKNGAVSGGKNGGDLLMTMKKRAPMRALRKPYSHWLPGIQEDYHGPRKSRPK
        MAVLLLFL IM QAQGIRLLEKG++KEYKK+G     KNGGD LMTMKKRAP+RALRKPYSHWLPGIQEDYHGPR  + +
Subjt:  MAVLLLFL-IMSQAQGIRLLEKGINKEYKKNGAVSGGKNGGDLLMTMKKRAPMRALRKPYSHWLPGIQEDYHGPRKSRPK
A0A5N6RX03 Uncharacterized protein6.0e-0443.33Show/hide
Query:  SMAVLLLFLIMS-QAQGIRL----LEKGINKEYKKNG-AVSGG----KNGGDLLMTMKKRAPMRALRKPYSHWLPGIQEDYHGPRKSRPK
        ++++LLL L++S +AQGIRL    +  G  K+++ +G A+  G    K+G     TMKKR   R L K   HWLP I EDY+GPR  RP+
Subjt:  SMAVLLLFLIMS-QAQGIRL----LEKGINKEYKKNG-AVSGG----KNGGDLLMTMKKRAPMRALRKPYSHWLPGIQEDYHGPRKSRPK
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGCTCTCTTCAATGGCGGTTCTTCTTCTTTTCCTTATCATGTCTCAAGCTCAAGGGATTAGGTTGTTGGAGAAAGGGATCAACAAAGAGTATAAGAAAAATGGAGC
TGTTTCGGGTGGTAAAAATGGTGGAGATTTATTGATGACAATGAAGAAGAGAGCCCCAATGAGGGCCTTAAGAAAACCATATTCTCATTGGCTACCAGGCATTCAAGAAG
ATTATCATGGACCAAGAAAATCTAGGCCAAAAGAAAAGAGTTTAGGACCCAGAAGGAACCAGAGAGGAAAAGTGGCTTGGGCCGAGGCCGAGCCCAAGGAAATTCCTGGG
ATCATAATCCTGCGACTAGCCCAACTCCAAGGAAGAGCAATAGAATCTGGATTTGGCTCGAAAACCCTCAAACCATGA
mRNA sequenceShow/hide mRNA sequence
ATGAAGCTCTCTTCAATGGCGGTTCTTCTTCTTTTCCTTATCATGTCTCAAGCTCAAGGGATTAGGTTGTTGGAGAAAGGGATCAACAAAGAGTATAAGAAAAATGGAGC
TGTTTCGGGTGGTAAAAATGGTGGAGATTTATTGATGACAATGAAGAAGAGAGCCCCAATGAGGGCCTTAAGAAAACCATATTCTCATTGGCTACCAGGCATTCAAGAAG
ATTATCATGGACCAAGAAAATCTAGGCCAAAAGAAAAGAGTTTAGGACCCAGAAGGAACCAGAGAGGAAAAGTGGCTTGGGCCGAGGCCGAGCCCAAGGAAATTCCTGGG
ATCATAATCCTGCGACTAGCCCAACTCCAAGGAAGAGCAATAGAATCTGGATTTGGCTCGAAAACCCTCAAACCATGA
Protein sequenceShow/hide protein sequence
MKLSSMAVLLLFLIMSQAQGIRLLEKGINKEYKKNGAVSGGKNGGDLLMTMKKRAPMRALRKPYSHWLPGIQEDYHGPRKSRPKEKSLGPRRNQRGKVAWAEAEPKEIPG
IIILRLAQLQGRAIESGFGSKTLKP