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HG10006597 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10006597
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Descriptionchitotriosidase-1-like
Genome locationChr07:20228421..20228711
RNA-Seq ExpressionHG10006597
SyntenyHG10006597
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6599362.1 Class V chitinase, partial [Cucurbita argyrosperma subsp. sororia]2.9e-1559.26Show/hide
Query:  MADTAPITDVVKAGYWLATTDPILPSANIDAMLFTHLFVGYASVDSTTYKVTIDSSQLVLINQFYFNCHIKYP-TSNLLSI
        MA+ A +T+ V AGYWLA+TD  LP+ANIDA LFTHLF GYA ++S TY+VTID SQL+LI+QF     +  P    LLSI
Subjt:  MADTAPITDVVKAGYWLATTDPILPSANIDAMLFTHLFVGYASVDSTTYKVTIDSSQLVLINQFYFNCHIKYP-TSNLLSI

KAG7030350.1 Chitotriosidase-1, partial [Cucurbita argyrosperma subsp. argyrosperma]1.1e-1458.02Show/hide
Query:  MADTAPITDVVKAGYWLATTDPILPSANIDAMLFTHLFVGYASVDSTTYKVTIDSSQLVLINQFYFNCHIKYP-TSNLLSI
        MA+ A +T+ V AGYWLA+TD  LP+ANIDA LFTHLF GYA ++S TY+VTID S L+LI+QF     +  P    LLSI
Subjt:  MADTAPITDVVKAGYWLATTDPILPSANIDAMLFTHLFVGYASVDSTTYKVTIDSSQLVLINQFYFNCHIKYP-TSNLLSI

XP_022946077.1 acidic mammalian chitinase-like [Cucurbita moschata]5.0e-1558.02Show/hide
Query:  MADTAPITDVVKAGYWLATTDPILPSANIDAMLFTHLFVGYASVDSTTYKVTIDSSQLVLINQFYFNCHIKYP-TSNLLSI
        MA+ A +T+ V AGYWLA+TD  LP+ANIDA LFTHLF GYA ++S TY+VT+D SQL+LI+QF     +  P    LLSI
Subjt:  MADTAPITDVVKAGYWLATTDPILPSANIDAMLFTHLFVGYASVDSTTYKVTIDSSQLVLINQFYFNCHIKYP-TSNLLSI

XP_022999577.1 chitotriosidase-1-like [Cucurbita maxima]5.9e-1657.83Show/hide
Query:  MADTAPITDVVKAGYWLATTDPILPSANIDAMLFTHLFVGYASVDSTTYKVTIDSSQLVLINQFYFNCHIKYP-TSNLLSIQG
        MA+ A +T+ V AGYWLA+TD  LP+ANIDA LFTHLF GYA ++S TY+VT+D SQL+LI+QF     +  P    LLSI G
Subjt:  MADTAPITDVVKAGYWLATTDPILPSANIDAMLFTHLFVGYASVDSTTYKVTIDSSQLVLINQFYFNCHIKYP-TSNLLSIQG

XP_022999580.1 chitotriosidase-1-like [Cucurbita maxima]5.9e-1657.83Show/hide
Query:  MADTAPITDVVKAGYWLATTDPILPSANIDAMLFTHLFVGYASVDSTTYKVTIDSSQLVLINQFYFNCHIKYP-TSNLLSIQG
        MA+ A +T+ V AGYWLA+TD  LP+ANIDA LFTHLF GYA ++S TY+VT+D SQL+LI+QF     +  P    LLSI G
Subjt:  MADTAPITDVVKAGYWLATTDPILPSANIDAMLFTHLFVGYASVDSTTYKVTIDSSQLVLINQFYFNCHIKYP-TSNLLSIQG

TrEMBL top hitse value%identityAlignment
A0A6J1CQ27 chitinase-3-like protein 28.6e-1355.41Show/hide
Query:  VVKAGYWLATTDPILPSANIDAMLFTHLFVGYASVDSTTYKVTIDSSQLVLINQFYFNCHIKYP-TSNLLSIQG
        +V+ GYW  +T+  LPSANIDA  F+HLF GY  VD  TYKVTIDSS+++LINQF     +  P    LLSI+G
Subjt:  VVKAGYWLATTDPILPSANIDAMLFTHLFVGYASVDSTTYKVTIDSSQLVLINQFYFNCHIKYP-TSNLLSIQG

A0A6J1G2P4 acidic mammalian chitinase-like2.4e-1558.02Show/hide
Query:  MADTAPITDVVKAGYWLATTDPILPSANIDAMLFTHLFVGYASVDSTTYKVTIDSSQLVLINQFYFNCHIKYP-TSNLLSI
        MA+ A +T+ V AGYWLA+TD  LP+ANIDA LFTHLF GYA ++S TY+VT+D SQL+LI+QF     +  P    LLSI
Subjt:  MADTAPITDVVKAGYWLATTDPILPSANIDAMLFTHLFVGYASVDSTTYKVTIDSSQLVLINQFYFNCHIKYP-TSNLLSI

A0A6J1G4H5 chitotriosidase-1-like isoform X12.9e-1356.79Show/hide
Query:  MADTAPITDVVKAGYWLATTDPILPSANIDAMLFTHLFVGYASVDSTTYKVTIDSSQLVLINQFYFNCHIKYP-TSNLLSI
        MA  A +T  V AGYWLA+T+  L +ANIDA LFTHLFVGYA +D  T++VT+D SQL+LINQF     +  P    LLSI
Subjt:  MADTAPITDVVKAGYWLATTDPILPSANIDAMLFTHLFVGYASVDSTTYKVTIDSSQLVLINQFYFNCHIKYP-TSNLLSI

A0A6J1KB82 chitotriosidase-1-like2.8e-1657.83Show/hide
Query:  MADTAPITDVVKAGYWLATTDPILPSANIDAMLFTHLFVGYASVDSTTYKVTIDSSQLVLINQFYFNCHIKYP-TSNLLSIQG
        MA+ A +T+ V AGYWLA+TD  LP+ANIDA LFTHLF GYA ++S TY+VT+D SQL+LI+QF     +  P    LLSI G
Subjt:  MADTAPITDVVKAGYWLATTDPILPSANIDAMLFTHLFVGYASVDSTTYKVTIDSSQLVLINQFYFNCHIKYP-TSNLLSIQG

A0A6J1KFT3 chitotriosidase-1-like2.8e-1657.83Show/hide
Query:  MADTAPITDVVKAGYWLATTDPILPSANIDAMLFTHLFVGYASVDSTTYKVTIDSSQLVLINQFYFNCHIKYP-TSNLLSIQG
        MA+ A +T+ V AGYWLA+TD  LP+ANIDA LFTHLF GYA ++S TY+VT+D SQL+LI+QF     +  P    LLSI G
Subjt:  MADTAPITDVVKAGYWLATTDPILPSANIDAMLFTHLFVGYASVDSTTYKVTIDSSQLVLINQFYFNCHIKYP-TSNLLSIQG

SwissProt top hitse value%identityAlignment
A0A072UR65 Class V chitinase CHIT5b7.5e-0637.84Show/hide
Query:  VKAGYWLATTDPILPSANIDAMLFTHLFVGYASVDSTTYKVTIDSSQLVLINQFYFNCHIKY-PTSNLLSIQGS
        VK  YWL   +P  P   +D  LFTH+F  + + ++ TYK+ I SSQ++ +N F      K  P + L SI G+
Subjt:  VKAGYWLATTDPILPSANIDAMLFTHLFVGYASVDSTTYKVTIDSSQLVLINQFYFNCHIKY-PTSNLLSIQGS

O81862 Class V chitinase8.3e-0536.84Show/hide
Query:  VVKAGYWLATTDPILPSANIDAMLFTHLFVGYASVDSTTYKVTIDSSQLVLINQFYFNCHIKYPT-SNLLSIQGSM
        VVKA YW   ++   P  +ID+ LFTHLF  +A ++S T +VT+ S+     + F      + P+   LLSI G +
Subjt:  VVKAGYWLATTDPILPSANIDAMLFTHLFVGYASVDSTTYKVTIDSSQLVLINQFYFNCHIKYPT-SNLLSIQGSM

Arabidopsis top hitse value%identityAlignment
AT4G19750.1 Glycosyl hydrolase family protein with chitinase insertion domain3.7e-0839.19Show/hide
Query:  VVKAGYWLATTDPILPSANIDAMLFTHLFVGYASVDSTTYKVTIDSSQLVLINQFYFNCHIK-YPTSNLLSIQG
        +VKA YW+   +   P+ NID+  FTHLF  +A VDS+T++VTI ++    ++ F      K      LLSI G
Subjt:  VVKAGYWLATTDPILPSANIDAMLFTHLFVGYASVDSTTYKVTIDSSQLVLINQFYFNCHIK-YPTSNLLSIQG

AT4G19760.1 Glycosyl hydrolase family protein with chitinase insertion domain6.5e-0538.1Show/hide
Query:  VVKAGYWL--------ATTDPILPSANIDAMLFTHLFVGYASVDSTTYKVTIDSSQLVLINQF
        +VKA YW                PS+ ID+ LFTHLF  +A VDS+T++VTI ++     + F
Subjt:  VVKAGYWL--------ATTDPILPSANIDAMLFTHLFVGYASVDSTTYKVTIDSSQLVLINQF

AT4G19810.1 Glycosyl hydrolase family protein with chitinase insertion domain5.9e-0636.84Show/hide
Query:  VVKAGYWLATTDPILPSANIDAMLFTHLFVGYASVDSTTYKVTIDSSQLVLINQFYFNCHIKYPT-SNLLSIQGSM
        VVKA YW   ++   P  +ID+ LFTHLF  +A ++S T +VT+ S+     + F      + P+   LLSI G +
Subjt:  VVKAGYWLATTDPILPSANIDAMLFTHLFVGYASVDSTTYKVTIDSSQLVLINQFYFNCHIKYPT-SNLLSIQGSM

AT4G19820.1 Glycosyl hydrolase family protein with chitinase insertion domain5.3e-0738.46Show/hide
Query:  VVKAGYWLATTDPILPSANIDAMLFTHLFVGYASVDSTTYKVTIDSSQLVLINQFYFNCHIKYPT-SNLLSIQGSMKF
        VVKA YW A ++   P A ID+ LFTHLF  +A +++ TY+V + S      + F      + PT   LLSI G   +
Subjt:  VVKAGYWLATTDPILPSANIDAMLFTHLFVGYASVDSTTYKVTIDSSQLVLINQFYFNCHIKYPT-SNLLSIQGSMKF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCGATACAGCTCCCATCACAGATGTTGTGAAAGCTGGTTACTGGCTAGCGACCACTGACCCTATACTTCCTTCCGCCAATATCGATGCTATGCTTTTCACTCATCT
CTTTGTTGGTTACGCTTCTGTTGACTCTACAACTTATAAAGTTACCATAGATTCTTCACAACTTGTTCTAATCAATCAGTTTTACTTCAACTGTCACATTAAGTACCCGA
CGTCAAACTTGTTGTCCATTCAAGGATCCATGAAGTTTTGGCTCAAATTGCCAAGGAGCCAACAATCGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCCGATACAGCTCCCATCACAGATGTTGTGAAAGCTGGTTACTGGCTAGCGACCACTGACCCTATACTTCCTTCCGCCAATATCGATGCTATGCTTTTCACTCATCT
CTTTGTTGGTTACGCTTCTGTTGACTCTACAACTTATAAAGTTACCATAGATTCTTCACAACTTGTTCTAATCAATCAGTTTTACTTCAACTGTCACATTAAGTACCCGA
CGTCAAACTTGTTGTCCATTCAAGGATCCATGAAGTTTTGGCTCAAATTGCCAAGGAGCCAACAATCGTGA
Protein sequenceShow/hide protein sequence
MADTAPITDVVKAGYWLATTDPILPSANIDAMLFTHLFVGYASVDSTTYKVTIDSSQLVLINQFYFNCHIKYPTSNLLSIQGSMKFWLKLPRSQQS