; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10006599 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10006599
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Descriptionacidic mammalian chitinase-like
Genome locationChr07:20235405..20235944
RNA-Seq ExpressionHG10006599
SyntenyHG10006599
Gene Ontology termsGO:0005975 - carbohydrate metabolic process (biological process)
InterPro domainsIPR001223 - Glycoside hydrolase family 18, catalytic domain
IPR017853 - Glycoside hydrolase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6599362.1 Class V chitinase, partial [Cucurbita argyrosperma subsp. sororia]1.6e-2247.76Show/hide
Query:  MADTAPITDVVKAGYWLDNHDPILPSP-ISMLCFSLILCWLRSVDSTTYKVTIDSSQLVLINQFTSTVTLSNPDVKTLLSLQGSNEVFAQMPRSQQNRDV
        MA+ A +T+ V AGYWL + D  LP+  I    F+ +      ++S TY+VTID SQL+LI+QF+STV LSNP+VKTLLS+     +FA M     NRD 
Subjt:  MADTAPITDVVKAGYWLDNHDPILPSP-ISMLCFSLILCWLRSVDSTTYKVTIDSSQLVLINQFTSTVTLSNPDVKTLLSLQGSNEVFAQMPRSQQNRDV

Query:  FINPPL-KQRAGSFDGLDLQWLYLFTEEEMRTLK
        FI   +   R G FDGLDLQWLY  ++++M   K
Subjt:  FINPPL-KQRAGSFDGLDLQWLYLFTEEEMRTLK
XP_022946077.1 acidic mammalian chitinase-like [Cucurbita moschata]1.2e-2247.76Show/hide
Query:  MADTAPITDVVKAGYWLDNHDPILPSP-ISMLCFSLILCWLRSVDSTTYKVTIDSSQLVLINQFTSTVTLSNPDVKTLLSLQGSNEVFAQMPRSQQNRDV
        MA+ A +T+ V AGYWL + D  LP+  I    F+ +      ++S TY+VT+D SQL+LI+QF+STV LSNP+VKTLLS+     VFA M     NRD 
Subjt:  MADTAPITDVVKAGYWLDNHDPILPSP-ISMLCFSLILCWLRSVDSTTYKVTIDSSQLVLINQFTSTVTLSNPDVKTLLSLQGSNEVFAQMPRSQQNRDV

Query:  FINPPL-KQRAGSFDGLDLQWLYLFTEEEMRTLK
        FI   +   R G FDGLDLQWLY  ++++M   K
Subjt:  FINPPL-KQRAGSFDGLDLQWLYLFTEEEMRTLK
XP_022999577.1 chitotriosidase-1-like [Cucurbita maxima]3.8e-2449.25Show/hide
Query:  MADTAPITDVVKAGYWLDNHDPILPSP-ISMLCFSLILCWLRSVDSTTYKVTIDSSQLVLINQFTSTVTLSNPDVKTLLSLQGSNEVFAQMPRSQQNRDV
        MA+ A +T+ V AGYWL + D  LP+  I    F+ +      ++S TY+VT+D SQL+LI+QF+STV LSNPDVKTLLS+ G   VFA M     NRD 
Subjt:  MADTAPITDVVKAGYWLDNHDPILPSP-ISMLCFSLILCWLRSVDSTTYKVTIDSSQLVLINQFTSTVTLSNPDVKTLLSLQGSNEVFAQMPRSQQNRDV

Query:  FINPPL-KQRAGSFDGLDLQWLYLFTEEEMRTLK
        FI   +   R G FDGLDLQWLY  ++++M   K
Subjt:  FINPPL-KQRAGSFDGLDLQWLYLFTEEEMRTLK
XP_022999580.1 chitotriosidase-1-like [Cucurbita maxima]4.2e-2348.51Show/hide
Query:  MADTAPITDVVKAGYWLDNHDPILPSP-ISMLCFSLILCWLRSVDSTTYKVTIDSSQLVLINQFTSTVTLSNPDVKTLLSLQGSNEVFAQMPRSQQNRDV
        MA+ A +T+ V AGYWL + D  LP+  I    F+ +      ++S TY+VT+D SQL+LI+QF+STV LSNP VKTLLS+ G   VFA M     NRD 
Subjt:  MADTAPITDVVKAGYWLDNHDPILPSP-ISMLCFSLILCWLRSVDSTTYKVTIDSSQLVLINQFTSTVTLSNPDVKTLLSLQGSNEVFAQMPRSQQNRDV

Query:  FINPPL-KQRAGSFDGLDLQWLYLFTEEEMRTLK
        FI   +   R G FDGLDLQWLY  ++++M   K
Subjt:  FINPPL-KQRAGSFDGLDLQWLYLFTEEEMRTLK
XP_023521369.1 acidic mammalian chitinase-like [Cucurbita pepo subsp. pepo]1.2e-2250Show/hide
Query:  APITDVVKAGYWLDNHDPILPSP-ISMLCFSLILCWLRSVDSTTYKVTIDSSQLVLINQFTSTVTLSNPDVKTLLSLQGSNEVFAQMPRSQQNRDVFINP
        A +T+ V AGYWL + D  LP+  I    F+ +      ++S TY+VTID SQL+L+NQF+ TV LSNPDVKTLLS+     VFA M     NRD FI  
Subjt:  APITDVVKAGYWLDNHDPILPSP-ISMLCFSLILCWLRSVDSTTYKVTIDSSQLVLINQFTSTVTLSNPDVKTLLSLQGSNEVFAQMPRSQQNRDVFINP

Query:  PL-KQRAGSFDGLDLQWLYLFTEEEMRTLK
         +   R G FDGLDLQWLY  ++EEM   K
Subjt:  PL-KQRAGSFDGLDLQWLYLFTEEEMRTLK
TrEMBL top hitse value%identityAlignment
A0A6J1DYG4 chitinase-3-like protein 22.9e-2245.19Show/hide
Query:  MADTAPITDVVKAGYWLDN-HDPILPSPISMLCFSLILCWLRSVDSTTYKVTIDSSQLVLINQFTSTVTLSNPDVKTLLSLQGSNEVFAQMPRSQQNRDV
        MA  +  T  V  GYWL + +  + PS I    F+ + C    +D  +Y+VT+ +SQ  LINQF+STV +SNPDVKTLLS++G  +VFA+M      RD 
Subjt:  MADTAPITDVVKAGYWLDN-HDPILPSPISMLCFSLILCWLRSVDSTTYKVTIDSSQLVLINQFTSTVTLSNPDVKTLLSLQGSNEVFAQMPRSQQNRDV

Query:  FINPPLKQRA-GSFDGLDLQWLYLFTEEEMRTLKL
        FI   ++  A G F+GLDLQWLY  +EEEM+  ++
Subjt:  FINPPLKQRA-GSFDGLDLQWLYLFTEEEMRTLKL
A0A6J1G2P4 acidic mammalian chitinase-like5.8e-2347.76Show/hide
Query:  MADTAPITDVVKAGYWLDNHDPILPSP-ISMLCFSLILCWLRSVDSTTYKVTIDSSQLVLINQFTSTVTLSNPDVKTLLSLQGSNEVFAQMPRSQQNRDV
        MA+ A +T+ V AGYWL + D  LP+  I    F+ +      ++S TY+VT+D SQL+LI+QF+STV LSNP+VKTLLS+     VFA M     NRD 
Subjt:  MADTAPITDVVKAGYWLDNHDPILPSP-ISMLCFSLILCWLRSVDSTTYKVTIDSSQLVLINQFTSTVTLSNPDVKTLLSLQGSNEVFAQMPRSQQNRDV

Query:  FINPPL-KQRAGSFDGLDLQWLYLFTEEEMRTLK
        FI   +   R G FDGLDLQWLY  ++++M   K
Subjt:  FINPPL-KQRAGSFDGLDLQWLYLFTEEEMRTLK
A0A6J1G4H5 chitotriosidase-1-like isoform X12.2e-2249.25Show/hide
Query:  MADTAPITDVVKAGYWL-DNHDPILPSPISMLCFSLILCWLRSVDSTTYKVTIDSSQLVLINQFTSTVTLSNPDVKTLLSLQGSNEVFAQMPRSQQNRDV
        MA  A +T  V AGYWL   +D +L + I    F+ +      +D  T++VT+D SQL+LINQF+STV LSNPDVKTLLS+     VFA M  S  NRD 
Subjt:  MADTAPITDVVKAGYWL-DNHDPILPSPISMLCFSLILCWLRSVDSTTYKVTIDSSQLVLINQFTSTVTLSNPDVKTLLSLQGSNEVFAQMPRSQQNRDV

Query:  FINPPL-KQRAGSFDGLDLQWLYLFTEEEMRTLK
        FI   +   R G FDGLDLQWLY  ++ EM   K
Subjt:  FINPPL-KQRAGSFDGLDLQWLYLFTEEEMRTLK
A0A6J1KB82 chitotriosidase-1-like1.8e-2449.25Show/hide
Query:  MADTAPITDVVKAGYWLDNHDPILPSP-ISMLCFSLILCWLRSVDSTTYKVTIDSSQLVLINQFTSTVTLSNPDVKTLLSLQGSNEVFAQMPRSQQNRDV
        MA+ A +T+ V AGYWL + D  LP+  I    F+ +      ++S TY+VT+D SQL+LI+QF+STV LSNPDVKTLLS+ G   VFA M     NRD 
Subjt:  MADTAPITDVVKAGYWLDNHDPILPSP-ISMLCFSLILCWLRSVDSTTYKVTIDSSQLVLINQFTSTVTLSNPDVKTLLSLQGSNEVFAQMPRSQQNRDV

Query:  FINPPL-KQRAGSFDGLDLQWLYLFTEEEMRTLK
        FI   +   R G FDGLDLQWLY  ++++M   K
Subjt:  FINPPL-KQRAGSFDGLDLQWLYLFTEEEMRTLK
A0A6J1KFT3 chitotriosidase-1-like2.0e-2348.51Show/hide
Query:  MADTAPITDVVKAGYWLDNHDPILPSP-ISMLCFSLILCWLRSVDSTTYKVTIDSSQLVLINQFTSTVTLSNPDVKTLLSLQGSNEVFAQMPRSQQNRDV
        MA+ A +T+ V AGYWL + D  LP+  I    F+ +      ++S TY+VT+D SQL+LI+QF+STV LSNP VKTLLS+ G   VFA M     NRD 
Subjt:  MADTAPITDVVKAGYWLDNHDPILPSP-ISMLCFSLILCWLRSVDSTTYKVTIDSSQLVLINQFTSTVTLSNPDVKTLLSLQGSNEVFAQMPRSQQNRDV

Query:  FINPPL-KQRAGSFDGLDLQWLYLFTEEEMRTLK
        FI   +   R G FDGLDLQWLY  ++++M   K
Subjt:  FINPPL-KQRAGSFDGLDLQWLYLFTEEEMRTLK
SwissProt top hitse value%identityAlignment
A0A072UR65 Class V chitinase CHIT5b5.7e-0731.75Show/hide
Query:  VKAGYWLDNHDPIL-PSPISMLCFSLILCWLRSVDSTTYKVTIDSSQLVLINQFTSTVTLSNPDVKTLLSLQG---SNEVFAQMPRSQQNRDVFINPPLK
        VK  YWL+N  P   P+ +    F+ I     + ++ TYK+ I SSQ++ +N FT T    +P   TL S+ G   ++ + A +         FIN  + 
Subjt:  VKAGYWLDNHDPIL-PSPISMLCFSLILCWLRSVDSTTYKVTIDSSQLVLINQFTSTVTLSNPDVKTLLSLQG---SNEVFAQMPRSQQNRDVFINPPLK

Query:  -QRAGSFDGLDLQWLYLFTEEEMRTL
          R   FDG+DL W +    +EM  L
Subjt:  -QRAGSFDGLDLQWLYLFTEEEMRTL
A0A072VEP0 Class V chitinase CHIT5a3.5e-0929.21Show/hide
Query:  VKAGYWLDNHDPILPSPISMLCFSLILCWLRSVDSTTYKVTIDSSQLVLINQFTSTVTLSNPDVKTLLSLQG---SNEVFAQMPRSQQNRDVFINPPLK-
        V++ YW    D   PS I    F+ IL      +  ++K+ I  S +     F   +   +P VKTLLS+ G   ++ +F+++  ++QNR++FIN  ++ 
Subjt:  VKAGYWLDNHDPILPSPISMLCFSLILCWLRSVDSTTYKVTIDSSQLVLINQFTSTVTLSNPDVKTLLSLQG---SNEVFAQMPRSQQNRDVFINPPLK-

Query:  QRAGSFDGLDLQWLYLFTEEEMRTLKLF------CFMAQSCCGRCQKFECSRATPCCFSVQPTISHPQYSYPIQTINK
         R   FDG+DL W +  T+++M  L L          A++   R  +   + A     +V+    H   SYP Q INK
Subjt:  QRAGSFDGLDLQWLYLFTEEEMRTLKLF------CFMAQSCCGRCQKFECSRATPCCFSVQPTISHPQYSYPIQTINK
O81862 Class V chitinase3.5e-0934.68Show/hide
Query:  VVKAGYWLDNHD-PILPSPISMLCFSLILCWLRSVDSTTYKVTIDSSQLVLINQFTSTVTLSNPDVKTLLSLQG---SNEVFAQMPRSQQNRDVFINPPL
        VVKA YW    + P+  + I    F+ + C    ++S T +VT+ S+     + FT TV   NP VKTLLS+ G       +A M  +  +R  FI+  +
Subjt:  VVKAGYWLDNHD-PILPSPISMLCFSLILCWLRSVDSTTYKVTIDSSQLVLINQFTSTVTLSNPDVKTLLSLQG---SNEVFAQMPRSQQNRDVFINPPL

Query:  K-QRAGSFDGLDLQWLYLFTEEEM
        +  R+  F GLDL W Y  +  EM
Subjt:  K-QRAGSFDGLDLQWLYLFTEEEM
Arabidopsis top hitse value%identityAlignment
AT4G19730.1 Glycosyl hydrolase superfamily protein6.4e-1435.71Show/hide
Query:  VKAGYWL---DNHDPILPS-PISMLCFSLILCWLRSVDSTTYKVTIDSSQLVLINQFTSTVTLSNPDVKTLLSLQG---SNEVFAQMPRSQQNRDVFINP
        VKA YW    +  DPI  +  I    F+ + C    +D+ ++KV +  +   + + FT TV + NP VKTLLS+ G   +N  FA M  + Q+R  FI+ 
Subjt:  VKAGYWL---DNHDPILPS-PISMLCFSLILCWLRSVDSTTYKVTIDSSQLVLINQFTSTVTLSNPDVKTLLSLQG---SNEVFAQMPRSQQNRDVFINP

Query:  PL-KQRAGSFDGLDLQWLYLFTEEEM
         +   R+  F GLDL W Y +++ EM
Subjt:  PL-KQRAGSFDGLDLQWLYLFTEEEM
AT4G19800.1 Glycosyl hydrolase family protein with chitinase insertion domain9.2e-1336.8Show/hide
Query:  TDVVKAGYWLDNHDPILPSPISMLCFSLILCWLRSVDSTTYKVTIDSSQLVLINQFTSTVTLSNPDVKTLLSLQGSN---EVFAQMPRSQQNRDVFINPP
        +DVVKA YW    D    + I    F+ + C    +++ +Y++TI +      + FT TV   NP VKTLLS+ G N   + FA M  +  +R  FI   
Subjt:  TDVVKAGYWLDNHDPILPSPISMLCFSLILCWLRSVDSTTYKVTIDSSQLVLINQFTSTVTLSNPDVKTLLSLQGSN---EVFAQMPRSQQNRDVFINPP

Query:  LK-QRAGSFDGLDLQWLYLFTEEEM
        +   R+  F GLDL W Y   EEEM
Subjt:  LK-QRAGSFDGLDLQWLYLFTEEEM
AT4G19810.1 Glycosyl hydrolase family protein with chitinase insertion domain2.5e-1034.68Show/hide
Query:  VVKAGYWLDNHD-PILPSPISMLCFSLILCWLRSVDSTTYKVTIDSSQLVLINQFTSTVTLSNPDVKTLLSLQG---SNEVFAQMPRSQQNRDVFINPPL
        VVKA YW    + P+  + I    F+ + C    ++S T +VT+ S+     + FT TV   NP VKTLLS+ G       +A M  +  +R  FI+  +
Subjt:  VVKAGYWLDNHD-PILPSPISMLCFSLILCWLRSVDSTTYKVTIDSSQLVLINQFTSTVTLSNPDVKTLLSLQG---SNEVFAQMPRSQQNRDVFINPPL

Query:  K-QRAGSFDGLDLQWLYLFTEEEM
        +  R+  F GLDL W Y  +  EM
Subjt:  K-QRAGSFDGLDLQWLYLFTEEEM
AT4G19820.1 Glycosyl hydrolase family protein with chitinase insertion domain1.0e-1136.59Show/hide
Query:  VVKAGYWLDNHDPILPSPISMLCFSLILCWLRSVDSTTYKVTIDSSQLVLINQFTSTVTLSNPDVKTLLSLQGS---NEVFAQMPRSQQNRDVFINPPLK
        VVKA YW    +  L + I    F+ + C    +++ TY+V + S      + FT TV   NP VKTLLS+ G    N  FA M  +  +R +FI+  +K
Subjt:  VVKAGYWLDNHDPILPSPISMLCFSLILCWLRSVDSTTYKVTIDSSQLVLINQFTSTVTLSNPDVKTLLSLQGS---NEVFAQMPRSQQNRDVFINPPLK

Query:  -QRAGSFDGLDLQWLYLFTEEEM
          R+  F GLDL W Y     EM
Subjt:  -QRAGSFDGLDLQWLYLFTEEEM

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCGATACAGCTCCCATCACAGATGTTGTGAAAGCTGGTTACTGGCTAGACAACCATGATCCTATACTTCCTTCGCCAATATCGATGCTATGCTTTTCACTCATTCT
TTGTTGGTTACGCTCTGTTGACTCTACAACTTATAAAGTTACCATAGATTCTTCACAACTTGTTCTAATCAATCAGTTTACTTCAACTGTCACATTAAGTAATCCCGACG
TCAAAACTTTGTTGTCCCTTCAAGGATCCAATGAAGTTTTTGCTCAAATGCCAAGGAGCCAACAAAATCGTGATGTGTTCATCAATCCTCCATTGAAGCAGAGAGCAGGT
TCCTTTGATGGCCTTGATCTTCAATGGCTATACCTCTTCACTGAAGAAGAAATGAGAACTTTGAAACTCTTCTGTTTTATGGCGCAAAGCTGTTGTGGAAGATGCCAAAA
ATTTGAGTGTTCCAGAGCTACTCCTTGTTGCTTCAGTGTCCAACCTACCATATCTCATCCACAATATTCATATCCAATTCAAACAATCAACAAAAGTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCCGATACAGCTCCCATCACAGATGTTGTGAAAGCTGGTTACTGGCTAGACAACCATGATCCTATACTTCCTTCGCCAATATCGATGCTATGCTTTTCACTCATTCT
TTGTTGGTTACGCTCTGTTGACTCTACAACTTATAAAGTTACCATAGATTCTTCACAACTTGTTCTAATCAATCAGTTTACTTCAACTGTCACATTAAGTAATCCCGACG
TCAAAACTTTGTTGTCCCTTCAAGGATCCAATGAAGTTTTTGCTCAAATGCCAAGGAGCCAACAAAATCGTGATGTGTTCATCAATCCTCCATTGAAGCAGAGAGCAGGT
TCCTTTGATGGCCTTGATCTTCAATGGCTATACCTCTTCACTGAAGAAGAAATGAGAACTTTGAAACTCTTCTGTTTTATGGCGCAAAGCTGTTGTGGAAGATGCCAAAA
ATTTGAGTGTTCCAGAGCTACTCCTTGTTGCTTCAGTGTCCAACCTACCATATCTCATCCACAATATTCATATCCAATTCAAACAATCAACAAAAGTTAA
Protein sequenceShow/hide protein sequence
MADTAPITDVVKAGYWLDNHDPILPSPISMLCFSLILCWLRSVDSTTYKVTIDSSQLVLINQFTSTVTLSNPDVKTLLSLQGSNEVFAQMPRSQQNRDVFINPPLKQRAG
SFDGLDLQWLYLFTEEEMRTLKLFCFMAQSCCGRCQKFECSRATPCCFSVQPTISHPQYSYPIQTINKS