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HG10006616 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10006616
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionPhosphopantothenoylcysteine decarboxylase subunit VHS3-like
Genome locationChr07:20333133..20340823
RNA-Seq ExpressionHG10006616
SyntenyHG10006616
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0063514.1 phosphopantothenoylcysteine decarboxylase subunit VHS3-like [Cucumis melo var. makuwa]1.1e-1457.45Show/hide
Query:  MELDGLDSVERTMWVRSVLEAMAVETVFATANSLACLLVAAGAMLNVANAAPGLAAIEESGNRRYRIGQIPYRSRSLGGNTESLSFRGRVFVAI
        MELD +  VERTMW RSVLEAMAVETVF TANSLACLL  AGAMLN+AN  PGLAAIEE    R+   ++  + R    N ++ S    V ++I
Subjt:  MELDGLDSVERTMWVRSVLEAMAVETVFATANSLACLLVAAGAMLNVANAAPGLAAIEESGNRRYRIGQIPYRSRSLGGNTESLSFRGRVFVAI

XP_004139284.1 prostatic spermine-binding protein [Cucumis sativus]8.1e-1583.05Show/hide
Query:  MELDGLDSVERTMWVRSVLEAMAVETVFATANSLACLLVAAGAMLNVANAAPGLAAIEE
        MELD +  VERTMWVRSVLEAMAV+TVF TANSLACLL AAGAMLN+AN  PGLAAIEE
Subjt:  MELDGLDSVERTMWVRSVLEAMAVETVFATANSLACLLVAAGAMLNVANAAPGLAAIEE

XP_008457268.1 PREDICTED: phosphopantothenoylcysteine decarboxylase subunit VHS3-like [Cucumis melo]5.2e-1481.36Show/hide
Query:  MELDGLDSVERTMWVRSVLEAMAVETVFATANSLACLLVAAGAMLNVANAAPGLAAIEE
        MELD +  VERTMW RSVLEAMAVETVF TANSLACLL  AGAMLN+AN  PGLAAIEE
Subjt:  MELDGLDSVERTMWVRSVLEAMAVETVFATANSLACLLVAAGAMLNVANAAPGLAAIEE

XP_022965978.1 prostatic spermine-binding protein-like [Cucurbita maxima]2.6e-1379.66Show/hide
Query:  MELDGLDSVERTMWVRSVLEAMAVETVFATANSLACLLVAAGAMLNVANAAPGLAAIEE
        MEL G+  V+RTMWVRSVLEA+AVETVF TANSLACLL AAGA+LN ANA PG AAIEE
Subjt:  MELDGLDSVERTMWVRSVLEAMAVETVFATANSLACLLVAAGAMLNVANAAPGLAAIEE

XP_038891026.1 prostatic spermine-binding protein-like [Benincasa hispida]1.6e-1586.44Show/hide
Query:  MELDGLDSVERTMWVRSVLEAMAVETVFATANSLACLLVAAGAMLNVANAAPGLAAIEE
        MELDG+  VERTMWVRSVLEAMAVET  ATANS ACLL AAGAMLNVANA PGLAAIEE
Subjt:  MELDGLDSVERTMWVRSVLEAMAVETVFATANSLACLLVAAGAMLNVANAAPGLAAIEE

TrEMBL top hitse value%identityAlignment
A0A1S3C539 phosphopantothenoylcysteine decarboxylase subunit VHS3-like2.5e-1481.36Show/hide
Query:  MELDGLDSVERTMWVRSVLEAMAVETVFATANSLACLLVAAGAMLNVANAAPGLAAIEE
        MELD +  VERTMW RSVLEAMAVETVF TANSLACLL  AGAMLN+AN  PGLAAIEE
Subjt:  MELDGLDSVERTMWVRSVLEAMAVETVFATANSLACLLVAAGAMLNVANAAPGLAAIEE

A0A5A7V8I6 Phosphopantothenoylcysteine decarboxylase subunit VHS3-like5.1e-1557.45Show/hide
Query:  MELDGLDSVERTMWVRSVLEAMAVETVFATANSLACLLVAAGAMLNVANAAPGLAAIEESGNRRYRIGQIPYRSRSLGGNTESLSFRGRVFVAI
        MELD +  VERTMW RSVLEAMAVETVF TANSLACLL  AGAMLN+AN  PGLAAIEE    R+   ++  + R    N ++ S    V ++I
Subjt:  MELDGLDSVERTMWVRSVLEAMAVETVFATANSLACLLVAAGAMLNVANAAPGLAAIEESGNRRYRIGQIPYRSRSLGGNTESLSFRGRVFVAI

A0A6J1FIZ1 prostatic spermine-binding protein-like1.3e-1379.66Show/hide
Query:  MELDGLDSVERTMWVRSVLEAMAVETVFATANSLACLLVAAGAMLNVANAAPGLAAIEE
        MEL G+  V+RTMWVRSVLEA+AVETVF TANSLACLL AAGA+LN ANA PG AAIEE
Subjt:  MELDGLDSVERTMWVRSVLEAMAVETVFATANSLACLLVAAGAMLNVANAAPGLAAIEE

A0A6J1HQJ4 prostatic spermine-binding protein-like1.3e-1379.66Show/hide
Query:  MELDGLDSVERTMWVRSVLEAMAVETVFATANSLACLLVAAGAMLNVANAAPGLAAIEE
        MEL G+  V+RTMWVRSVLEA+AVETVF TANSLACLL AAGA+LN ANA PG AAIEE
Subjt:  MELDGLDSVERTMWVRSVLEAMAVETVFATANSLACLLVAAGAMLNVANAAPGLAAIEE

A0A6J1KGN6 prostatic spermine-binding protein-like4.8e-1376.27Show/hide
Query:  MELDGLDSVERTMWVRSVLEAMAVETVFATANSLACLLVAAGAMLNVANAAPGLAAIEE
        MEL+G+  +ERTMWV SVLEAM +ETVF TANSLACLL A GA+LN ANA PGLAAIEE
Subjt:  MELDGLDSVERTMWVRSVLEAMAVETVFATANSLACLLVAAGAMLNVANAAPGLAAIEE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGTTGGACGGTCTAGACTCTGTGGAGAGAACCATGTGGGTGCGCTCTGTTTTGGAAGCTATGGCGGTGGAGACTGTTTTTGCCACTGCTAACTCCCTTGCTTGCCT
TCTGGTGGCGGCAGGAGCTATGTTAAATGTTGCCAATGCTGCACCAGGATTGGCTGCAATTGAGGAAAGTGGGAACCGCCGTTATAGAATCGGACAAATCCCTTATCGTT
CCCGTTCACTAGGAGGAAATACCGAGTCGCTGAGCTTTCGAGGCCGGGTCTTTGTTGCGATTGAGGTTAAGAAGGAGAGAGGAGTTGGTGTAGGTTGTGTCAGCGGAGGT
GGAGGCGGTGGCGGCGCGTTTCCGGAGTTGTTCGAGTTCTTCCTTATCCTCGATTTTGACATCGATCTTGGTGGGTTGTCTTCTCAGCATTTCGCCGGTTTCGCAGCCGC
CGGAAATCCAATTTCGGTTCTAATAGTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAGTTGGACGGTCTAGACTCTGTGGAGAGAACCATGTGGGTGCGCTCTGTTTTGGAAGCTATGGCGGTGGAGACTGTTTTTGCCACTGCTAACTCCCTTGCTTGCCT
TCTGGTGGCGGCAGGAGCTATGTTAAATGTTGCCAATGCTGCACCAGGATTGGCTGCAATTGAGGAAAGTGGGAACCGCCGTTATAGAATCGGACAAATCCCTTATCGTT
CCCGTTCACTAGGAGGAAATACCGAGTCGCTGAGCTTTCGAGGCCGGGTCTTTGTTGCGATTGAGGTTAAGAAGGAGAGAGGAGTTGGTGTAGGTTGTGTCAGCGGAGGT
GGAGGCGGTGGCGGCGCGTTTCCGGAGTTGTTCGAGTTCTTCCTTATCCTCGATTTTGACATCGATCTTGGTGGGTTGTCTTCTCAGCATTTCGCCGGTTTCGCAGCCGC
CGGAAATCCAATTTCGGTTCTAATAGTTTGA
Protein sequenceShow/hide protein sequence
MELDGLDSVERTMWVRSVLEAMAVETVFATANSLACLLVAAGAMLNVANAAPGLAAIEESGNRRYRIGQIPYRSRSLGGNTESLSFRGRVFVAIEVKKERGVGVGCVSGG
GGGGGAFPELFEFFLILDFDIDLGGLSSQHFAGFAAAGNPISVLIV