CuGenDBv2

Gene ID	HG10006626
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	Small nuclear RNA activating complex (SNAPc), subunit SNAP43 protein
Genome location	Chr07:20427958..20429616
RNA-Seq Expression	HG10006626
Synteny	HG10006626
Gene Ontology terms	NA
InterPro domains	IPR019188 - Small nuclear RNA activating complex (SNAPc), subunit SNAP43

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0063525.1 putative mediator of RNA polymerase II transcription subunit 26 isoform X1 [Cucumis melo var. makuwa]

6.4e-143

91.55

Show/hide

Query:  MDLSPFRLDIDELINEFAECGFTSFVDMKKVWIGRKFTYIFEAAPSSNLAFFMQSIYAQSISHMLSTASLSHRLGGLFCLYCLYETQPFKPPYKIYLSIG
        MDLSPFRLDIDELINEFAECGFTSF DMKKVWIGRKFTYIFEAAPS+NLAFFMQSI+AQSISHM S ASL HRLGGL+CLYCLYETQPF+PPYKIYLSIG
Subjt:  MDLSPFRLDIDELINEFAECGFTSFVDMKKVWIGRKFTYIFEAAPSSNLAFFMQSIYAQSISHMLSTASLSHRLGGLFCLYCLYETQPFKPPYKIYLSIG

Query:  ELKKLKELVVDAKENDVKVVSSVVKQMLEKNMFLFGSVDMNESAALETVNQLTELQNARIQVAYNKLFDDTPIENYIHMDMGMEVGSNILKKMSTDYSEA
        ELKKLKELVVDAKEN+VKVVS VVK+MLEKNMFLFGSVDMNESAALETVNQLTELQNAR+QVAYNKLF+DTPIENYIHMD+GMEVGSN+L KMSTDYSEA
Subjt:  ELKKLKELVVDAKENDVKVVSSVVKQMLEKNMFLFGSVDMNESAALETVNQLTELQNARIQVAYNKLFDDTPIENYIHMDMGMEVGSNILKKMSTDYSEA

Query:  KKLALYEASEIVDVQDIKHIAEDERLIGDTVEKIAEDWNVQRGVFYEQTGLDQQLVPVEAEQQLLEDYANENFDKELERMLTDV
        KKLALYEAS+IVDVQDIKHIAEDE+LIGDTVEKIAEDWNVQRGVFYEQTGLDQQL+PVEA+QQLLED+ + NFDKELERMLTDV
Subjt:  KKLALYEASEIVDVQDIKHIAEDERLIGDTVEKIAEDWNVQRGVFYEQTGLDQQLVPVEAEQQLLEDYANENFDKELERMLTDV

KAE8651536.1 hypothetical protein Csa_019424 [Cucumis sativus]

1.3e-143

92.61

Show/hide

Query:  MDLSPFRLDIDELINEFAECGFTSFVDMKKVWIGRKFTYIFEAAPSSNLAFFMQSIYAQSISHMLSTASLSHRLGGLFCLYCLYETQPFKPPYKIYLSIG
        MDLSPFRLDIDELINEFAECGFTSFVDMKKVWIGRKFTYIFEAAPS+NLAFFMQSI+AQSISHMLSTASL HRLGGL+CLYCLYETQPF+PPYKIYLSIG
Subjt:  MDLSPFRLDIDELINEFAECGFTSFVDMKKVWIGRKFTYIFEAAPSSNLAFFMQSIYAQSISHMLSTASLSHRLGGLFCLYCLYETQPFKPPYKIYLSIG

Query:  ELKKLKELVVDAKENDVKVVSSVVKQMLEKNMFLFGSVDMNESAALETVNQLTELQNARIQVAYNKLFDDTPIENYIHMDMGMEVGSNILKKMSTDYSEA
        ELKKLKELVVDAKEN+VKVVS VVK+MLEKNMFLFGSVDMNESAALETVNQLTELQNAR+QVAY KLF+DTPI NYIHMD+GMEVGSNIL KMSTDYSEA
Subjt:  ELKKLKELVVDAKENDVKVVSSVVKQMLEKNMFLFGSVDMNESAALETVNQLTELQNARIQVAYNKLFDDTPIENYIHMDMGMEVGSNILKKMSTDYSEA

Query:  KKLALYEASEIVDVQDIKHIAEDERLIGDTVEKIAEDWNVQRGVFYEQTGLDQQLVPVEAEQQLLEDYANENFDKELERMLTDV
        KKLALYEAS+IVDVQDIKHIAEDE+LIGDTVEKIAEDWNVQRGVFYEQTGLDQQ VPVEA+QQLLED+A+ NFDKELERMLTDV
Subjt:  KKLALYEASEIVDVQDIKHIAEDERLIGDTVEKIAEDWNVQRGVFYEQTGLDQQLVPVEAEQQLLEDYANENFDKELERMLTDV

XP_008457139.1 PREDICTED: uncharacterized protein LOC103496883 isoform X1 [Cucumis melo]

3.2e-142

90.85

Show/hide

Query:  MDLSPFRLDIDELINEFAECGFTSFVDMKKVWIGRKFTYIFEAAPSSNLAFFMQSIYAQSISHMLSTASLSHRLGGLFCLYCLYETQPFKPPYKIYLSIG
        MDLSPFRLDIDELINEFAECGFTSF DMKKVWIGRKFTYIFEAAPS+NLAFFMQSI+AQSISHM S ASL HRLGGL+CLYCLYETQPF+PPYKIYLSIG
Subjt:  MDLSPFRLDIDELINEFAECGFTSFVDMKKVWIGRKFTYIFEAAPSSNLAFFMQSIYAQSISHMLSTASLSHRLGGLFCLYCLYETQPFKPPYKIYLSIG

Query:  ELKKLKELVVDAKENDVKVVSSVVKQMLEKNMFLFGSVDMNESAALETVNQLTELQNARIQVAYNKLFDDTPIENYIHMDMGMEVGSNILKKMSTDYSEA
        ELKKLKELV+DAKEN+VKVVS VVK+MLEKNMFLFGSVDMNESAALETVNQLTELQNAR+QVAYNKLF+DTPIENYIHMD+GMEVGSN+L KMSTDYSEA
Subjt:  ELKKLKELVVDAKENDVKVVSSVVKQMLEKNMFLFGSVDMNESAALETVNQLTELQNARIQVAYNKLFDDTPIENYIHMDMGMEVGSNILKKMSTDYSEA

Query:  KKLALYEASEIVDVQDIKHIAEDERLIGDTVEKIAEDWNVQRGVFYEQTGLDQQLVPVEAEQQLLEDYANENFDKELERMLTDV
        KKLALYEAS+IVDVQDIKHIAEDE+LIGDTVEKIAEDWNVQRGVFYEQTGLDQQL+PVEA+QQLLED+ + +FDKELERMLTDV
Subjt:  KKLALYEASEIVDVQDIKHIAEDERLIGDTVEKIAEDWNVQRGVFYEQTGLDQQLVPVEAEQQLLEDYANENFDKELERMLTDV

XP_031737111.1 uncharacterized protein LOC101216308 isoform X1 [Cucumis sativus]

1.3e-143

92.61

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Query:  MDLSPFRLDIDELINEFAECGFTSFVDMKKVWIGRKFTYIFEAAPSSNLAFFMQSIYAQSISHMLSTASLSHRLGGLFCLYCLYETQPFKPPYKIYLSIG
        MDLSPFRLDIDELINEFAECGFTSFVDMKKVWIGRKFTYIFEAAPS+NLAFFMQSI+AQSISHMLSTASL HRLGGL+CLYCLYETQPF+PPYKIYLSIG
Subjt:  MDLSPFRLDIDELINEFAECGFTSFVDMKKVWIGRKFTYIFEAAPSSNLAFFMQSIYAQSISHMLSTASLSHRLGGLFCLYCLYETQPFKPPYKIYLSIG

Query:  ELKKLKELVVDAKENDVKVVSSVVKQMLEKNMFLFGSVDMNESAALETVNQLTELQNARIQVAYNKLFDDTPIENYIHMDMGMEVGSNILKKMSTDYSEA
        ELKKLKELVVDAKEN+VKVVS VVK+MLEKNMFLFGSVDMNESAALETVNQLTELQNAR+QVAY KLF+DTPI NYIHMD+GMEVGSNIL KMSTDYSEA
Subjt:  ELKKLKELVVDAKENDVKVVSSVVKQMLEKNMFLFGSVDMNESAALETVNQLTELQNARIQVAYNKLFDDTPIENYIHMDMGMEVGSNILKKMSTDYSEA

Query:  KKLALYEASEIVDVQDIKHIAEDERLIGDTVEKIAEDWNVQRGVFYEQTGLDQQLVPVEAEQQLLEDYANENFDKELERMLTDV
        KKLALYEAS+IVDVQDIKHIAEDE+LIGDTVEKIAEDWNVQRGVFYEQTGLDQQ VPVEA+QQLLED+A+ NFDKELERMLTDV
Subjt:  KKLALYEASEIVDVQDIKHIAEDERLIGDTVEKIAEDWNVQRGVFYEQTGLDQQLVPVEAEQQLLEDYANENFDKELERMLTDV

XP_038890120.1 uncharacterized protein LOC120079795 isoform X1 [Benincasa hispida]

1.4e-142

91.9

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Query:  MDLSPFRLDIDELINEFAECGFTSFVDMKKVWIGRKFTYIFEAAPSSNLAFFMQSIYAQSISHMLSTASLSHRLGGLFCLYCLYETQPFKPPYKIYLSIG
        MDL+PFRLDIDELINEFAE GFTSFVDMKKVW+GRKFTYIFEAAPS+NLAFFMQSIYAQSISHMLSTASLSHRLGGL+CLYCLYETQPFKP YKIYLSIG
Subjt:  MDLSPFRLDIDELINEFAECGFTSFVDMKKVWIGRKFTYIFEAAPSSNLAFFMQSIYAQSISHMLSTASLSHRLGGLFCLYCLYETQPFKPPYKIYLSIG

Query:  ELKKLKELVVDAKENDVKVVSSVVKQMLEKNMFLFGSVDMNESAALETVNQLTELQNARIQVAYNKLFDDTPIENYIHMDMGMEVGSNILKKMSTDYSEA
        ELKKLKELVVDAKEN+VKV SSVVK+MLEKNMFLFGSVDM ESAALETVNQLTELQNARIQVAYNKLF+DTPIENYIHMD+GMEVGSN+LKKMSTDYSEA
Subjt:  ELKKLKELVVDAKENDVKVVSSVVKQMLEKNMFLFGSVDMNESAALETVNQLTELQNARIQVAYNKLFDDTPIENYIHMDMGMEVGSNILKKMSTDYSEA

Query:  KKLALYEASEIVDVQDIKHIAEDERLIGDTVEKIAEDWNVQRGVFYEQTGLDQQLVPVEAEQQLLEDYANENFDKELERMLTDV
        KKLALYEASEIVDV DIKHIAEDE+LIGDTVEKIAEDWN+QRG F+EQTGLDQQLVPVEAEQ LLE +A+ENFD+ELERMLTDV
Subjt:  KKLALYEASEIVDVQDIKHIAEDERLIGDTVEKIAEDWNVQRGVFYEQTGLDQQLVPVEAEQQLLEDYANENFDKELERMLTDV

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LL25 Uncharacterized protein

6.2e-144

92.61

Show/hide

Query:  MDLSPFRLDIDELINEFAECGFTSFVDMKKVWIGRKFTYIFEAAPSSNLAFFMQSIYAQSISHMLSTASLSHRLGGLFCLYCLYETQPFKPPYKIYLSIG
        MDLSPFRLDIDELINEFAECGFTSFVDMKKVWIGRKFTYIFEAAPS+NLAFFMQSI+AQSISHMLSTASL HRLGGL+CLYCLYETQPF+PPYKIYLSIG
Subjt:  MDLSPFRLDIDELINEFAECGFTSFVDMKKVWIGRKFTYIFEAAPSSNLAFFMQSIYAQSISHMLSTASLSHRLGGLFCLYCLYETQPFKPPYKIYLSIG

Query:  ELKKLKELVVDAKENDVKVVSSVVKQMLEKNMFLFGSVDMNESAALETVNQLTELQNARIQVAYNKLFDDTPIENYIHMDMGMEVGSNILKKMSTDYSEA
        ELKKLKELVVDAKEN+VKVVS VVK+MLEKNMFLFGSVDMNESAALETVNQLTELQNAR+QVAY KLF+DTPI NYIHMD+GMEVGSNIL KMSTDYSEA
Subjt:  ELKKLKELVVDAKENDVKVVSSVVKQMLEKNMFLFGSVDMNESAALETVNQLTELQNARIQVAYNKLFDDTPIENYIHMDMGMEVGSNILKKMSTDYSEA

Query:  KKLALYEASEIVDVQDIKHIAEDERLIGDTVEKIAEDWNVQRGVFYEQTGLDQQLVPVEAEQQLLEDYANENFDKELERMLTDV
        KKLALYEAS+IVDVQDIKHIAEDE+LIGDTVEKIAEDWNVQRGVFYEQTGLDQQ VPVEA+QQLLED+A+ NFDKELERMLTDV
Subjt:  KKLALYEASEIVDVQDIKHIAEDERLIGDTVEKIAEDWNVQRGVFYEQTGLDQQLVPVEAEQQLLEDYANENFDKELERMLTDV

A0A1S3C4E1 uncharacterized protein LOC103496883 isoform X1

1.5e-142

90.85

Show/hide

Query:  MDLSPFRLDIDELINEFAECGFTSFVDMKKVWIGRKFTYIFEAAPSSNLAFFMQSIYAQSISHMLSTASLSHRLGGLFCLYCLYETQPFKPPYKIYLSIG
        MDLSPFRLDIDELINEFAECGFTSF DMKKVWIGRKFTYIFEAAPS+NLAFFMQSI+AQSISHM S ASL HRLGGL+CLYCLYETQPF+PPYKIYLSIG
Subjt:  MDLSPFRLDIDELINEFAECGFTSFVDMKKVWIGRKFTYIFEAAPSSNLAFFMQSIYAQSISHMLSTASLSHRLGGLFCLYCLYETQPFKPPYKIYLSIG

Query:  ELKKLKELVVDAKENDVKVVSSVVKQMLEKNMFLFGSVDMNESAALETVNQLTELQNARIQVAYNKLFDDTPIENYIHMDMGMEVGSNILKKMSTDYSEA
        ELKKLKELV+DAKEN+VKVVS VVK+MLEKNMFLFGSVDMNESAALETVNQLTELQNAR+QVAYNKLF+DTPIENYIHMD+GMEVGSN+L KMSTDYSEA
Subjt:  ELKKLKELVVDAKENDVKVVSSVVKQMLEKNMFLFGSVDMNESAALETVNQLTELQNARIQVAYNKLFDDTPIENYIHMDMGMEVGSNILKKMSTDYSEA

Query:  KKLALYEASEIVDVQDIKHIAEDERLIGDTVEKIAEDWNVQRGVFYEQTGLDQQLVPVEAEQQLLEDYANENFDKELERMLTDV
        KKLALYEAS+IVDVQDIKHIAEDE+LIGDTVEKIAEDWNVQRGVFYEQTGLDQQL+PVEA+QQLLED+ + +FDKELERMLTDV
Subjt:  KKLALYEASEIVDVQDIKHIAEDERLIGDTVEKIAEDWNVQRGVFYEQTGLDQQLVPVEAEQQLLEDYANENFDKELERMLTDV

A0A1S3C4X9 uncharacterized protein LOC103496883 isoform X2

1.1e-140

90.49

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Query:  MDLSPFRLDIDELINEFAECGFTSFVDMKKVWIGRKFTYIFEAAPSSNLAFFMQSIYAQSISHMLSTASLSHRLGGLFCLYCLYETQPFKPPYKIYLSIG
        MDLSPFRLDIDELINEFAECGFTSF DMKKVWIGRKFTYIFEAAPS+NLAFFMQSI+AQSISHM S ASL HRLGGL+CLYCLYETQPF+PPYKIYLSIG
Subjt:  MDLSPFRLDIDELINEFAECGFTSFVDMKKVWIGRKFTYIFEAAPSSNLAFFMQSIYAQSISHMLSTASLSHRLGGLFCLYCLYETQPFKPPYKIYLSIG

Query:  ELKKLKELVVDAKENDVKVVSSVVKQMLEKNMFLFGSVDMNESAALETVNQLTELQNARIQVAYNKLFDDTPIENYIHMDMGMEVGSNILKKMSTDYSEA
        ELKKLKELV+DAKEN+VKVVS VVK+MLEKNMFLFGSVDMNESAALETVNQLTELQNAR+QVAYNKLF+DTPIENYIHMD+GMEVGSN+L KMSTDYSEA
Subjt:  ELKKLKELVVDAKENDVKVVSSVVKQMLEKNMFLFGSVDMNESAALETVNQLTELQNARIQVAYNKLFDDTPIENYIHMDMGMEVGSNILKKMSTDYSEA

Query:  KKLALYEASEIVDVQDIKHIAEDERLIGDTVEKIAEDWNVQRGVFYEQTGLDQQLVPVEAEQQLLEDYANENFDKELERMLTDV
        KKLALY AS+IVDVQDIKHIAEDE+LIGDTVEKIAEDWNVQRGVFYEQTGLDQQL+PVEA+QQLLED+ + +FDKELERMLTDV
Subjt:  KKLALYEASEIVDVQDIKHIAEDERLIGDTVEKIAEDWNVQRGVFYEQTGLDQQLVPVEAEQQLLEDYANENFDKELERMLTDV

A0A5A7VCA1 Putative mediator of RNA polymerase II transcription subunit 26 isoform X1

3.1e-143

91.55

Show/hide

Query:  MDLSPFRLDIDELINEFAECGFTSFVDMKKVWIGRKFTYIFEAAPSSNLAFFMQSIYAQSISHMLSTASLSHRLGGLFCLYCLYETQPFKPPYKIYLSIG
        MDLSPFRLDIDELINEFAECGFTSF DMKKVWIGRKFTYIFEAAPS+NLAFFMQSI+AQSISHM S ASL HRLGGL+CLYCLYETQPF+PPYKIYLSIG
Subjt:  MDLSPFRLDIDELINEFAECGFTSFVDMKKVWIGRKFTYIFEAAPSSNLAFFMQSIYAQSISHMLSTASLSHRLGGLFCLYCLYETQPFKPPYKIYLSIG

Query:  ELKKLKELVVDAKENDVKVVSSVVKQMLEKNMFLFGSVDMNESAALETVNQLTELQNARIQVAYNKLFDDTPIENYIHMDMGMEVGSNILKKMSTDYSEA
        ELKKLKELVVDAKEN+VKVVS VVK+MLEKNMFLFGSVDMNESAALETVNQLTELQNAR+QVAYNKLF+DTPIENYIHMD+GMEVGSN+L KMSTDYSEA
Subjt:  ELKKLKELVVDAKENDVKVVSSVVKQMLEKNMFLFGSVDMNESAALETVNQLTELQNARIQVAYNKLFDDTPIENYIHMDMGMEVGSNILKKMSTDYSEA

Query:  KKLALYEASEIVDVQDIKHIAEDERLIGDTVEKIAEDWNVQRGVFYEQTGLDQQLVPVEAEQQLLEDYANENFDKELERMLTDV
        KKLALYEAS+IVDVQDIKHIAEDE+LIGDTVEKIAEDWNVQRGVFYEQTGLDQQL+PVEA+QQLLED+ + NFDKELERMLTDV
Subjt:  KKLALYEASEIVDVQDIKHIAEDERLIGDTVEKIAEDWNVQRGVFYEQTGLDQQLVPVEAEQQLLEDYANENFDKELERMLTDV

A0A6J1CN36 uncharacterized protein LOC111013003

6.0e-131

84.97

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Query:  MDLSPFRLDIDELINEFAECGFTSFVDMKKVWIGRKFTYIFEAAPSSNLAFFMQSIYAQSISHMLSTASLSHRLGGLFCLYCLYETQPFKPPYKIYLSIG
        M+LSPFRLDIDELI E+AE G+TSF DMK VW GRKFTYIFEAAP SNLAFFMQS+YAQSI HM+ TASLS RLGG +CLYCLYETQPFKPPYKIYLSIG
Subjt:  MDLSPFRLDIDELINEFAECGFTSFVDMKKVWIGRKFTYIFEAAPSSNLAFFMQSIYAQSISHMLSTASLSHRLGGLFCLYCLYETQPFKPPYKIYLSIG

Query:  ELKKLKELVVDAKENDVKVVSSVVKQMLEKNMFLFGSVDMNESAALETVNQLTELQNARIQVAYNKLFDDTPIENYIHMDMGMEVGSNILKKMSTDYSEA
        ELKKLKELVVDAKE +VKV S+V K+MLEKNMFLFGSVDMNES+ALETVNQLTELQNARIQVAYNKLF DTPIE+YIHMD+GMEVG N+LKKMSTDYSEA
Subjt:  ELKKLKELVVDAKENDVKVVSSVVKQMLEKNMFLFGSVDMNESAALETVNQLTELQNARIQVAYNKLFDDTPIENYIHMDMGMEVGSNILKKMSTDYSEA

Query:  KKLALYEASEIVDVQDIKHIAEDERLIGDTVEKIAEDWNVQRGVFYEQTGLDQQLVPVEA--EQQLLEDYANENFDKELERMLTDV
        KKLALYEAS+I+DVQDIKHI+ED+RLIGDTVE+IAE+WNVQRGVFYEQTGLD+QLVPVEA  E QLL  +A+ENFDKELERMLTD+
Subjt:  KKLALYEASEIVDVQDIKHIAEDERLIGDTVEKIAEDWNVQRGVFYEQTGLDQQLVPVEA--EQQLLEDYANENFDKELERMLTDV

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT3G53270.1 Small nuclear RNA activating complex (SNAPc), subunit SNAP43 protein

1.1e-81

53.12

Show/hide

Query:  MDLSPFRLDIDELINEFAECGFTSFVDMKKVWIGRKFTYIFEAAPSSNLAFFMQSIYAQSISHMLSTASLSHRLGGLFCLYCLYETQPFKPPYKIYLSIG
        M+LSPF+ DIDELI+EF E   T+F DMK VW+ RKF++I+EA+P+SNLAFFMQS+Y  +I HM+S  S S RLGGL+CLYCL+E QPFKP ++IY+S+ 
Subjt:  MDLSPFRLDIDELINEFAECGFTSFVDMKKVWIGRKFTYIFEAAPSSNLAFFMQSIYAQSISHMLSTASLSHRLGGLFCLYCLYETQPFKPPYKIYLSIG

Query:  ELKKLKELVVDAKENDVKVVSSVVKQMLEKNMFLFGSVDMNESAALETVNQLTELQNARIQVAYNKLFDDTPIENYIHMDMGMEVGSNILKKMSTDYSEA
        EL K ++LVV+AK+  V++ ++V K+ML++NM +FG+VD  E++A +T++QLTELQNAR++ AY KL  DT I  +IH+DMG EV  N L KMS +Y+EA
Subjt:  ELKKLKELVVDAKENDVKVVSSVVKQMLEKNMFLFGSVDMNESAALETVNQLTELQNARIQVAYNKLFDDTPIENYIHMDMGMEVGSNILKKMSTDYSEA

Query:  KKLALYEASEIVDVQDIKHIAEDERLIGDTVEKIAEDWNVQRGVFYEQTGLD------QQLVPVEAEQQLLEDYANENFDKELERMLT
        KK A+  A EI+++ DIKHI+E++ L+G+ +EK+ E+W+ QR  FYEQT LD      +QL  VE ++       ++ FD EL+R+L+
Subjt:  KKLALYEASEIVDVQDIKHIAEDERLIGDTVEKIAEDWNVQRGVFYEQTGLD------QQLVPVEAEQQLLEDYANENFDKELERMLT

AT3G53270.2 Small nuclear RNA activating complex (SNAPc), subunit SNAP43 protein

1.1e-81

53.12

Show/hide

Query:  MDLSPFRLDIDELINEFAECGFTSFVDMKKVWIGRKFTYIFEAAPSSNLAFFMQSIYAQSISHMLSTASLSHRLGGLFCLYCLYETQPFKPPYKIYLSIG
        M+LSPF+ DIDELI+EF E   T+F DMK VW+ RKF++I+EA+P+SNLAFFMQS+Y  +I HM+S  S S RLGGL+CLYCL+E QPFKP ++IY+S+ 
Subjt:  MDLSPFRLDIDELINEFAECGFTSFVDMKKVWIGRKFTYIFEAAPSSNLAFFMQSIYAQSISHMLSTASLSHRLGGLFCLYCLYETQPFKPPYKIYLSIG

Query:  ELKKLKELVVDAKENDVKVVSSVVKQMLEKNMFLFGSVDMNESAALETVNQLTELQNARIQVAYNKLFDDTPIENYIHMDMGMEVGSNILKKMSTDYSEA
        EL K ++LVV+AK+  V++ ++V K+ML++NM +FG+VD  E++A +T++QLTELQNAR++ AY KL  DT I  +IH+DMG EV  N L KMS +Y+EA
Subjt:  ELKKLKELVVDAKENDVKVVSSVVKQMLEKNMFLFGSVDMNESAALETVNQLTELQNARIQVAYNKLFDDTPIENYIHMDMGMEVGSNILKKMSTDYSEA

Query:  KKLALYEASEIVDVQDIKHIAEDERLIGDTVEKIAEDWNVQRGVFYEQTGLD------QQLVPVEAEQQLLEDYANENFDKELERMLT
        KK A+  A EI+++ DIKHI+E++ L+G+ +EK+ E+W+ QR  FYEQT LD      +QL  VE ++       ++ FD EL+R+L+
Subjt:  KKLALYEASEIVDVQDIKHIAEDERLIGDTVEKIAEDWNVQRGVFYEQTGLD------QQLVPVEAEQQLLEDYANENFDKELERMLT

AT3G53270.3 Small nuclear RNA activating complex (SNAPc), subunit SNAP43 protein

1.1e-81

53.12

Show/hide

Query:  MDLSPFRLDIDELINEFAECGFTSFVDMKKVWIGRKFTYIFEAAPSSNLAFFMQSIYAQSISHMLSTASLSHRLGGLFCLYCLYETQPFKPPYKIYLSIG
        M+LSPF+ DIDELI+EF E   T+F DMK VW+ RKF++I+EA+P+SNLAFFMQS+Y  +I HM+S  S S RLGGL+CLYCL+E QPFKP ++IY+S+ 
Subjt:  MDLSPFRLDIDELINEFAECGFTSFVDMKKVWIGRKFTYIFEAAPSSNLAFFMQSIYAQSISHMLSTASLSHRLGGLFCLYCLYETQPFKPPYKIYLSIG

Query:  ELKKLKELVVDAKENDVKVVSSVVKQMLEKNMFLFGSVDMNESAALETVNQLTELQNARIQVAYNKLFDDTPIENYIHMDMGMEVGSNILKKMSTDYSEA
        EL K ++LVV+AK+  V++ ++V K+ML++NM +FG+VD  E++A +T++QLTELQNAR++ AY KL  DT I  +IH+DMG EV  N L KMS +Y+EA
Subjt:  ELKKLKELVVDAKENDVKVVSSVVKQMLEKNMFLFGSVDMNESAALETVNQLTELQNARIQVAYNKLFDDTPIENYIHMDMGMEVGSNILKKMSTDYSEA

Query:  KKLALYEASEIVDVQDIKHIAEDERLIGDTVEKIAEDWNVQRGVFYEQTGLD------QQLVPVEAEQQLLEDYANENFDKELERMLT
        KK A+  A EI+++ DIKHI+E++ L+G+ +EK+ E+W+ QR  FYEQT LD      +QL  VE ++       ++ FD EL+R+L+
Subjt:  KKLALYEASEIVDVQDIKHIAEDERLIGDTVEKIAEDWNVQRGVFYEQTGLD------QQLVPVEAEQQLLEDYANENFDKELERMLT

AT3G53270.4 Small nuclear RNA activating complex (SNAPc), subunit SNAP43 protein

1.1e-81

53.12

Show/hide

Query:  MDLSPFRLDIDELINEFAECGFTSFVDMKKVWIGRKFTYIFEAAPSSNLAFFMQSIYAQSISHMLSTASLSHRLGGLFCLYCLYETQPFKPPYKIYLSIG
        M+LSPF+ DIDELI+EF E   T+F DMK VW+ RKF++I+EA+P+SNLAFFMQS+Y  +I HM+S  S S RLGGL+CLYCL+E QPFKP ++IY+S+ 
Subjt:  MDLSPFRLDIDELINEFAECGFTSFVDMKKVWIGRKFTYIFEAAPSSNLAFFMQSIYAQSISHMLSTASLSHRLGGLFCLYCLYETQPFKPPYKIYLSIG

Query:  ELKKLKELVVDAKENDVKVVSSVVKQMLEKNMFLFGSVDMNESAALETVNQLTELQNARIQVAYNKLFDDTPIENYIHMDMGMEVGSNILKKMSTDYSEA
        EL K ++LVV+AK+  V++ ++V K+ML++NM +FG+VD  E++A +T++QLTELQNAR++ AY KL  DT I  +IH+DMG EV  N L KMS +Y+EA
Subjt:  ELKKLKELVVDAKENDVKVVSSVVKQMLEKNMFLFGSVDMNESAALETVNQLTELQNARIQVAYNKLFDDTPIENYIHMDMGMEVGSNILKKMSTDYSEA

Query:  KKLALYEASEIVDVQDIKHIAEDERLIGDTVEKIAEDWNVQRGVFYEQTGLD------QQLVPVEAEQQLLEDYANENFDKELERMLT
        KK A+  A EI+++ DIKHI+E++ L+G+ +EK+ E+W+ QR  FYEQT LD      +QL  VE ++       ++ FD EL+R+L+
Subjt:  KKLALYEASEIVDVQDIKHIAEDERLIGDTVEKIAEDWNVQRGVFYEQTGLD------QQLVPVEAEQQLLEDYANENFDKELERMLT

AT3G53270.5 Small nuclear RNA activating complex (SNAPc), subunit SNAP43 protein

1.1e-81

53.12

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Query:  MDLSPFRLDIDELINEFAECGFTSFVDMKKVWIGRKFTYIFEAAPSSNLAFFMQSIYAQSISHMLSTASLSHRLGGLFCLYCLYETQPFKPPYKIYLSIG
        M+LSPF+ DIDELI+EF E   T+F DMK VW+ RKF++I+EA+P+SNLAFFMQS+Y  +I HM+S  S S RLGGL+CLYCL+E QPFKP ++IY+S+ 
Subjt:  MDLSPFRLDIDELINEFAECGFTSFVDMKKVWIGRKFTYIFEAAPSSNLAFFMQSIYAQSISHMLSTASLSHRLGGLFCLYCLYETQPFKPPYKIYLSIG

Query:  ELKKLKELVVDAKENDVKVVSSVVKQMLEKNMFLFGSVDMNESAALETVNQLTELQNARIQVAYNKLFDDTPIENYIHMDMGMEVGSNILKKMSTDYSEA
        EL K ++LVV+AK+  V++ ++V K+ML++NM +FG+VD  E++A +T++QLTELQNAR++ AY KL  DT I  +IH+DMG EV  N L KMS +Y+EA
Subjt:  ELKKLKELVVDAKENDVKVVSSVVKQMLEKNMFLFGSVDMNESAALETVNQLTELQNARIQVAYNKLFDDTPIENYIHMDMGMEVGSNILKKMSTDYSEA

Query:  KKLALYEASEIVDVQDIKHIAEDERLIGDTVEKIAEDWNVQRGVFYEQTGLD------QQLVPVEAEQQLLEDYANENFDKELERMLT
        KK A+  A EI+++ DIKHI+E++ L+G+ +EK+ E+W+ QR  FYEQT LD      +QL  VE ++       ++ FD EL+R+L+
Subjt:  KKLALYEASEIVDVQDIKHIAEDERLIGDTVEKIAEDWNVQRGVFYEQTGLD------QQLVPVEAEQQLLEDYANENFDKELERMLT

Sequences

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CDS sequence

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ATGGATCTCTCTCCATTCAGGCTTGATATTGATGAGCTGATCAATGAATTTGCTGAGTGTGGATTTACATCTTTTGTTGATATGAAGAAAGTATGGATTGGAAGAAAATT
CACTTACATATTTGAGGCTGCTCCTTCTTCCAACTTGGCGTTCTTTATGCAATCAATCTATGCCCAATCAATTAGTCATATGCTCAGTACTGCTTCTTTGTCACACAGAC
TGGGTGGCCTTTTTTGCCTCTACTGTCTTTATGAGACACAACCCTTTAAGCCTCCTTACAAAATCTACCTGTCTATTGGAGAGTTGAAGAAACTGAAGGAACTTGTTGTT
GATGCAAAAGAAAATGATGTAAAAGTGGTATCTTCTGTGGTGAAACAAATGTTAGAAAAGAACATGTTCCTCTTTGGTTCTGTAGACATGAATGAGAGCGCTGCTTTGGA
AACAGTGAATCAACTAACGGAATTGCAAAATGCCCGCATTCAAGTAGCCTATAATAAGTTGTTTGATGATACCCCGATAGAAAACTATATCCATATGGACATGGGGATGG
AAGTTGGTTCGAATATATTAAAAAAGATGTCAACAGATTATTCAGAGGCCAAGAAACTTGCATTATATGAAGCAAGTGAGATAGTGGATGTTCAGGACATAAAGCACATA
GCAGAAGATGAGAGATTGATTGGAGATACAGTTGAAAAGATTGCTGAGGACTGGAACGTTCAAAGAGGAGTTTTTTATGAACAAACTGGACTCGACCAACAGCTTGTTCC
AGTCGAGGCAGAGCAACAGTTACTAGAAGATTATGCCAATGAAAATTTTGATAAGGAACTTGAAAGAATGCTAACCGATGTTTAA

mRNA sequence

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Protein sequence

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MDLSPFRLDIDELINEFAECGFTSFVDMKKVWIGRKFTYIFEAAPSSNLAFFMQSIYAQSISHMLSTASLSHRLGGLFCLYCLYETQPFKPPYKIYLSIGELKKLKELVV
DAKENDVKVVSSVVKQMLEKNMFLFGSVDMNESAALETVNQLTELQNARIQVAYNKLFDDTPIENYIHMDMGMEVGSNILKKMSTDYSEAKKLALYEASEIVDVQDIKHI
AEDERLIGDTVEKIAEDWNVQRGVFYEQTGLDQQLVPVEAEQQLLEDYANENFDKELERMLTDV

HG10006626 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome