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HG10006650 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10006650
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionUnknown protein
Genome locationChr07:20724572..20725028
RNA-Seq ExpressionHG10006650
SyntenyHG10006650
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN60682.1 hypothetical protein Csa_019276 [Cucumis sativus]2.0e-3778.15Show/hide
Query:  MAMALAALSGTVIVVLSFCLHKSHPSISSVEVVKKKEMEKKKKGRKRVHFADDLAIF-STEELQRKKGLILGPSPPRGRAPARRLTSNGGGGGGMPANRV
        MAMA A   GTVIVVLSF LHKSHPSISS  V+KKKE EKKKKGRK+VHF+DDLAIF ST++L+RKK ++LG SPP GRAPAR LT++GGGGGG+PANR 
Subjt:  MAMALAALSGTVIVVLSFCLHKSHPSISSVEVVKKKEMEKKKKGRKRVHFADDLAIF-STEELQRKKGLILGPSPPRGRAPARRLTSNGGGGGGMPANRV

Query:  ALYNGILRDRLVHRIAYSL
        ALYNGILR+RLVHRIAYSL
Subjt:  ALYNGILRDRLVHRIAYSL

XP_008457539.1 PREDICTED: uncharacterized protein LOC103497202 [Cucumis melo]2.5e-4085Show/hide
Query:  MAMALAALS-GTVIVVLSFCLHKSHPSISSVEVVKKKEMEKKKKGRKRVHFADDLAIF-STEELQRKKGLILGPSPPRGRAPARRLTSNGGGGGGMPANR
        MAMA AALS GTVIVVLS  LHKSHPSISS  VV+KKEMEKKKKGRKRVHF+DDLAIF STEEL+RKK +ILG SP  GRA ARRLT NGGGGGGMPANR
Subjt:  MAMALAALS-GTVIVVLSFCLHKSHPSISSVEVVKKKEMEKKKKGRKRVHFADDLAIF-STEELQRKKGLILGPSPPRGRAPARRLTSNGGGGGGMPANR

Query:  VALYNGILRDRLVHRIAYSL
         ALYNGILRDRLVHRIAYSL
Subjt:  VALYNGILRDRLVHRIAYSL

XP_022946910.1 uncharacterized protein LOC111450851 isoform X1 [Cucurbita moschata]1.0e-3373.77Show/hide
Query:  MAMALAALSGTVIVVLSFCLHKSHPSISSVEVVKKKE----MEKKKKGRKRVHFADDLAIFSTEELQRKKGLILGPSPPRGRAPARRLTSNGGGGGGMPA
        MAMA+AALSG V VVLSF   KS  S+SS    K+K     ++KKKKGRKRVHFADD A+ STEELQRK GLILGPSPP GRAP   LTS+GGGG GMPA
Subjt:  MAMALAALSGTVIVVLSFCLHKSHPSISSVEVVKKKE----MEKKKKGRKRVHFADDLAIFSTEELQRKKGLILGPSPPRGRAPARRLTSNGGGGGGMPA

Query:  NRVALYNGILRDRLVHRIAYSL
        NRVALYNGILRDRLVHR+AYSL
Subjt:  NRVALYNGILRDRLVHRIAYSL

XP_022946911.1 uncharacterized protein LOC111450851 isoform X2 [Cucurbita moschata]6.9e-3575.42Show/hide
Query:  MAMALAALSGTVIVVLSFCLHKSHPSISSVEVVKKKEMEKKKKGRKRVHFADDLAIFSTEELQRKKGLILGPSPPRGRAPARRLTSNGGGGGGMPANRVA
        MAMA+AALSG V VVLSF   KS  S+SSV       ++KKKKGRKRVHFADD A+ STEELQRK GLILGPSPP GRAP   LTS+GGGG GMPANRVA
Subjt:  MAMALAALSGTVIVVLSFCLHKSHPSISSVEVVKKKEMEKKKKGRKRVHFADDLAIFSTEELQRKKGLILGPSPPRGRAPARRLTSNGGGGGGMPANRVA

Query:  LYNGILRDRLVHRIAYSL
        LYNGILRDRLVHR+AYSL
Subjt:  LYNGILRDRLVHRIAYSL

XP_038890799.1 uncharacterized protein LOC120080255 [Benincasa hispida]1.3e-4690.68Show/hide
Query:  MAMALAALSGTVIVVLSFCLHKSHPSISSVEVVKKKEMEKKKKGRKRVHFADDLAIFSTEELQRKKGLILGPSPPRGRAPARRLTSNGGGGGGMPANRVA
        MAMA AALSGTVIV+LSFCLHKS PSISS  VVKKKEMEKKKKGRKRVHFADDLAIF TEELQ KKGLILG SPP GR PARRLTS GGGGGGMPANRVA
Subjt:  MAMALAALSGTVIVVLSFCLHKSHPSISSVEVVKKKEMEKKKKGRKRVHFADDLAIFSTEELQRKKGLILGPSPPRGRAPARRLTSNGGGGGGMPANRVA

Query:  LYNGILRDRLVHRIAYSL
        LYNGILRDRLVHRIAYSL
Subjt:  LYNGILRDRLVHRIAYSL

TrEMBL top hitse value%identityAlignment
A0A0A0LIY8 Uncharacterized protein9.5e-3878.15Show/hide
Query:  MAMALAALSGTVIVVLSFCLHKSHPSISSVEVVKKKEMEKKKKGRKRVHFADDLAIF-STEELQRKKGLILGPSPPRGRAPARRLTSNGGGGGGMPANRV
        MAMA A   GTVIVVLSF LHKSHPSISS  V+KKKE EKKKKGRK+VHF+DDLAIF ST++L+RKK ++LG SPP GRAPAR LT++GGGGGG+PANR 
Subjt:  MAMALAALSGTVIVVLSFCLHKSHPSISSVEVVKKKEMEKKKKGRKRVHFADDLAIF-STEELQRKKGLILGPSPPRGRAPARRLTSNGGGGGGMPANRV

Query:  ALYNGILRDRLVHRIAYSL
        ALYNGILR+RLVHRIAYSL
Subjt:  ALYNGILRDRLVHRIAYSL

A0A1S3C5Q6 uncharacterized protein LOC1034972021.2e-4085Show/hide
Query:  MAMALAALS-GTVIVVLSFCLHKSHPSISSVEVVKKKEMEKKKKGRKRVHFADDLAIF-STEELQRKKGLILGPSPPRGRAPARRLTSNGGGGGGMPANR
        MAMA AALS GTVIVVLS  LHKSHPSISS  VV+KKEMEKKKKGRKRVHF+DDLAIF STEEL+RKK +ILG SP  GRA ARRLT NGGGGGGMPANR
Subjt:  MAMALAALS-GTVIVVLSFCLHKSHPSISSVEVVKKKEMEKKKKGRKRVHFADDLAIF-STEELQRKKGLILGPSPPRGRAPARRLTSNGGGGGGMPANR

Query:  VALYNGILRDRLVHRIAYSL
         ALYNGILRDRLVHRIAYSL
Subjt:  VALYNGILRDRLVHRIAYSL

A0A5A7V7G5 Uncharacterized protein3.7e-2667.5Show/hide
Query:  MAMALAALS-GTVIVVLSFCLHKSHPSISSVEVVKKKEMEKKKKGRKRVHFADDLAIF-STEELQRKKGLILGPSPPRGRAPARRLTSNGGGGGGMPANR
        MAMA AALS GTVIVVLS  LHKSHPSISS                         AIF STEEL+RKK +ILG SP  GRA ARRLT NGGGGGGMPANR
Subjt:  MAMALAALS-GTVIVVLSFCLHKSHPSISSVEVVKKKEMEKKKKGRKRVHFADDLAIF-STEELQRKKGLILGPSPPRGRAPARRLTSNGGGGGGMPANR

Query:  VALYNGILRDRLVHRIAYSL
         ALYNGILRDRLVHRIAYSL
Subjt:  VALYNGILRDRLVHRIAYSL

A0A6J1G4X1 uncharacterized protein LOC111450851 isoform X23.4e-3575.42Show/hide
Query:  MAMALAALSGTVIVVLSFCLHKSHPSISSVEVVKKKEMEKKKKGRKRVHFADDLAIFSTEELQRKKGLILGPSPPRGRAPARRLTSNGGGGGGMPANRVA
        MAMA+AALSG V VVLSF   KS  S+SSV       ++KKKKGRKRVHFADD A+ STEELQRK GLILGPSPP GRAP   LTS+GGGG GMPANRVA
Subjt:  MAMALAALSGTVIVVLSFCLHKSHPSISSVEVVKKKEMEKKKKGRKRVHFADDLAIFSTEELQRKKGLILGPSPPRGRAPARRLTSNGGGGGGMPANRVA

Query:  LYNGILRDRLVHRIAYSL
        LYNGILRDRLVHR+AYSL
Subjt:  LYNGILRDRLVHRIAYSL

A0A6J1G5C3 uncharacterized protein LOC111450851 isoform X14.9e-3473.77Show/hide
Query:  MAMALAALSGTVIVVLSFCLHKSHPSISSVEVVKKKE----MEKKKKGRKRVHFADDLAIFSTEELQRKKGLILGPSPPRGRAPARRLTSNGGGGGGMPA
        MAMA+AALSG V VVLSF   KS  S+SS    K+K     ++KKKKGRKRVHFADD A+ STEELQRK GLILGPSPP GRAP   LTS+GGGG GMPA
Subjt:  MAMALAALSGTVIVVLSFCLHKSHPSISSVEVVKKKE----MEKKKKGRKRVHFADDLAIFSTEELQRKKGLILGPSPPRGRAPARRLTSNGGGGGGMPA

Query:  NRVALYNGILRDRLVHRIAYSL
        NRVALYNGILRDRLVHR+AYSL
Subjt:  NRVALYNGILRDRLVHRIAYSL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTATGGCTTTGGCAGCTCTCTCAGGAACCGTCATCGTTGTCCTTTCCTTCTGCCTCCATAAATCCCACCCCTCAATTTCCTCTGTTGAAGTGGTGAAGAAGAAAGA
GATGGAGAAGAAGAAGAAAGGAAGAAAAAGAGTTCATTTTGCTGATGATTTGGCCATTTTTAGTACTGAAGAATTGCAGAGAAAAAAAGGCTTAATTTTGGGACCTTCGC
CGCCGAGGGGAAGAGCTCCGGCGCGGCGTTTGACGAGCAACGGTGGAGGAGGAGGCGGAATGCCGGCAAATAGAGTAGCGCTGTACAATGGAATCTTAAGGGATCGTTTG
GTTCACAGGATAGCATATTCTCTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCTATGGCTTTGGCAGCTCTCTCAGGAACCGTCATCGTTGTCCTTTCCTTCTGCCTCCATAAATCCCACCCCTCAATTTCCTCTGTTGAAGTGGTGAAGAAGAAAGA
GATGGAGAAGAAGAAGAAAGGAAGAAAAAGAGTTCATTTTGCTGATGATTTGGCCATTTTTAGTACTGAAGAATTGCAGAGAAAAAAAGGCTTAATTTTGGGACCTTCGC
CGCCGAGGGGAAGAGCTCCGGCGCGGCGTTTGACGAGCAACGGTGGAGGAGGAGGCGGAATGCCGGCAAATAGAGTAGCGCTGTACAATGGAATCTTAAGGGATCGTTTG
GTTCACAGGATAGCATATTCTCTTTAA
Protein sequenceShow/hide protein sequence
MAMALAALSGTVIVVLSFCLHKSHPSISSVEVVKKKEMEKKKKGRKRVHFADDLAIFSTEELQRKKGLILGPSPPRGRAPARRLTSNGGGGGGMPANRVALYNGILRDRL
VHRIAYSL